lineage | Count |
---|---|
lineage4.4.1.2 | 1 |
14 | |
lineage4.6.2.2 | 2 |
lineage4 | 40 |
lineage4.9 | 12 |
lineage3 | 4 |
lineage5.1.2 | 1 |
lineage4.1.2.1 | 3 |
lineage4.6.1.1 | 1 |
lineage4.8;lineage4.1 | 2 |
lineage2.2.1 | 4 |
lineage2.2 | 1 |
lineage1.2.1.2 | 1 |
lineage4.1.1.3 | 1 |
lineage4.1.2 | 1 |
lineage4.2.1 | 1 |
spoligotype | Count |
---|---|
None | 89 |
ID | Drug resistance | Lineage | Country iso2 | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR7535086 | Other | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR108471 | HR-TB | lineage4 | None | ERR3283055 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR400529 | Other | lineage3 | None | ERR3797046 | HR-TB | None | ERR387051 | HR-TB | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR4798431 | HR-TB | None | ERR4178226 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6865502 | Sensitive | lineage4 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR990545 | Other | lineage3 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786843 | Other | None | SRR17658565 | Other | lineage3 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR3675488 | HR-TB | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR3675265 | Other | lineage4 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675222 | Other | None | SRR3675501 | HR-TB | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675456 | HR-TB | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675292 | Sensitive | lineage4 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR3675555 | HR-TB | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR4817998 | Other | lineage3 | None | SRR4035745 | Other | lineage4.1.2 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR6045519 | HR-TB | None | SRR6045503 | HR-TB | None | ERR4830353 | Other | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | ERR2693227 | Other | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046802 | Other | lineage4 | None | SRR6046897 | Sensitive | lineage4 | None |
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