Rv0667 - c.1341C>T
Drug resistance types
98 Sensitive
59 RR-TB
194 HR-TB
21 MDR-TB
4 Pre-XDR-TB
2 XDR-TB
127 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.4.2 | 1 |
| lineage4.1.1.1 | 111 |
| La1.8.1 | 4 |
| La1.7;lineage4.9 | 8 |
| lineage4.9 | 196 |
| lineage4.1.2.1 | 6 |
| lineage1.2.1.1 | 1 |
| lineage2.2;lineage4 | 1 |
| La2;lineage4.9 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.1.1.3 | 4 |
| La3;lineage4.9 | 12 |
| lineage4.6.2.2 | 3 |
| lineage3 | 4 |
| lineage4.4.1.1 | 2 |
| lineage4.2.1 | 2 |
| lineage2.2.1 | 23 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.3.2.1 | 5 |
| La1;lineage4.1.2 | 1 |
| lineage4.8 | 24 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| M.canetti;lineage2.2 | 2 |
| lineage5.1.4 | 1 |
| La1.7.1 | 1 |
| lineage4.1.2 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| lineage4.1.1.1;lineage4.3.4.2 | 3 |
| lineage4.2.2.2 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| La1;lineage4.9 | 3 |
| lineage4.8.1 | 1 |
| lineage3.1.1 | 2 |
| lineage4.1;lineage4.8 | 2 |
| La1.3 | 1 |
| lineage2.2.1;lineage4 | 2 |
| lineage1.1.2 | 2 |
| lineage4 | 10 |
| lineage4.3.4.2.1 | 3 |
| lineage4.5 | 1 |
| lineage1.1.3.2 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4.1;lineage4.9 | 2 |
| lineage5.1.2 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage6.1.2 | 1 |
| lineage4.3.3 | 2 |
| lineage4.8;lineage4.9 | 2 |
| La1.2.BCG | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage2.2.1;lineage4.4.2 | 1 |
| 5 | |
| La1.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage4.1.3 | 1 |
| M.canetti;lineage4.9 | 2 |
| lineage4.4 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.2.2 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage1.2.1.2 | 1 |
| La1.7 | 2 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage1.1.1;lineage4 | 1 |
| lineage4.7 | 1 |
| La3;lineage4 | 1 |
| La1.6 | 1 |
| lineage4.1.1.2 | 1 |
| lineage3.1.3 | 1 |
| lineage4.3.4.2 | 2 |
| La2;lineage2.2 | 1 |
| lineage2.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 505 |
Geographic prevalence
Country level data for this variant is available for 51 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR15316595 | RR-TB | lineage4.4.2 | None | ERR1274712 | HR-TB | lineage4.1.1.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR19314702 | HR-TB | lineage4.1.1.1 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR6397487 | HR-TB | lineage4.1.1.1 | ca | SRR6397593 | HR-TB | lineage4.1.1.1 | ca | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736848 | Other | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR323115 | Sensitive | lineage4.9 | None | SRR16370648 | HR-TB | lineage4.1.1.1 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR067699 | HR-TB | La1;lineage2;lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR1274710 | HR-TB | lineage4.1.1.1 | None | ERR4821655 | HR-TB | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR6397539 | HR-TB | lineage4.1.1.1 | ca | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | SRR6398064 | HR-TB | lineage4.1.1.1 | ca | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR5341308 | HR-TB | lineage4.9 | None | ERR1274690 | HR-TB | lineage4.1.1.1 | None | ERR1274664 | HR-TB | lineage4.1.1.1 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR349264 | Other | lineage4.9 | None | ERR1035122 | HR-TB | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR323062 | HR-TB | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR1180355 | Sensitive | lineage4.9 | None | ERR1274691 | HR-TB | lineage4.1.1.1 | None | ERR751326 | Other | lineage4.9 | None | SRR3675235 | HR-TB | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | SRR6398029 | HR-TB | lineage4.1.1.1 | ca | SRR6045706 | Other | lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR323107 | HR-TB | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR1274702 | HR-TB | lineage4.1.1.1 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR6397452 | HR-TB | lineage4.1.1.1 | ca | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | ERR3797064 | Other | La3;lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | SRR6044875 | Other | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | SRR24827302 | HR-TB | lineage4.1.1.1 | None | SRR6044876 | Sensitive | lineage4.9 | None | ERR1274703 | HR-TB | lineage4.1.1.1 | None | SRR6398102 | HR-TB | lineage4.1.1.1 | ca | SRR6045050 | Sensitive | lineage4.3.2.1 | None | ERR363453 | Other | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | ERR1274714 | HR-TB | lineage4.1.1.1 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR978734 | RR-TB | lineage4.8 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR1274673 | HR-TB | lineage4.1.1.1 | None | ERR978750 | RR-TB | lineage4.8 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR373947 | Other | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR1274656 | HR-TB | lineage4.1.1.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR363500 | Other | lineage4.9 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR1274661 | HR-TB | lineage4.1.1.1 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | SRR6045503 | Other | lineage4.9 | None | ERR349266 | Other | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR161037 | HR-TB | lineage4.9 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR736856 | HR-TB | lineage4.9 | None | SRR6397799 | HR-TB | lineage4.1.1.1 | ca | SRR6397993 | HR-TB | lineage4.1.1.1 | ca | ERR4188247 | HR-TB | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | ERR1274669 | HR-TB | lineage4.1.1.1 | None | ERR1274695 | HR-TB | lineage4.1.1.1 | None | ERR6866639 | HR-TB | lineage4.9 | None | ERR926165 | Other | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR6397513 | HR-TB | lineage4.1.1.1 | ca | SAMEA5569694 | MDR-TB | lineage4.1.1.1;lineage4.3.4.2 | None | ERR6866410 | HR-TB | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR978726 | RR-TB | lineage4.8 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR6398123 | HR-TB | lineage4.1.1.1 | ca | ERR3797015 | HR-TB | lineage4.9 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR926156 | Other | lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | ERR2513259 | Other | lineage3 | None | SRR6398025 | HR-TB | lineage4.1.1.1 | ca | ERR1274672 | HR-TB | lineage4.1.1.1 | None | ERR926157 | Other | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR990545 | RR-TB | lineage3 | None | SRR6152644 | HR-TB | lineage4.1.1.1 | ca | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | SRR23961542 | Other | La1;lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR6397347 | HR-TB | lineage4.1.1.1 | ca | ERR4816762 | Sensitive | lineage4.9 | None | SRR16099295 | HR-TB | lineage4.1.1.1 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR349265 | Other | lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR16156817 | Other | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR400345 | Other | lineage4.9 | None | SRR6398103 | HR-TB | lineage4.1.1.1 | ca | ERR176643 | Other | La3;lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR6865502 | Sensitive | lineage4 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | SRR1181349 | Sensitive | lineage4 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR6397529 | HR-TB | lineage4.1.1.1 | ca | ERR323066 | HR-TB | lineage4.9 | None | ERR124636 | HR-TB | lineage4.9 | None | SRR6397928 | HR-TB | lineage4.1.1.1 | ca | ERR6359066 | HR-TB | lineage4.9 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR16156188 | Sensitive | lineage4.9 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | ERR4811031 | Other | lineage4.5 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR3675477 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6511621 | HR-TB | lineage4.9 | None | ERR1274684 | HR-TB | lineage4.1.1.1 | None | ERR1274678 | HR-TB | lineage4.1.1.1 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR7645906 | Other | lineage2.2.1 | None | ERR1274716 | HR-TB | lineage4.1.1.1 | None | SRR6045371 | Other | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR9786525 | RR-TB | lineage4.1;lineage4.8 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR6397759 | HR-TB | lineage4.1.1.1 | ca | ERR176751 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR3797081 | Sensitive | lineage4.9 | None | ERR3797073 | Other | La1.8.1 | None | ERR9029875 | MDR-TB | lineage4.1.1.1;lineage4.3.4.2 | None | SRR1181289 | RR-TB | lineage2.2.1 | None | SRR6397350 | HR-TB | lineage4.1.1.1 | ca | ERR3283014 | Other | La3;lineage4.9 | None | ERR363490 | Other | lineage4.9 | None | ERR7821126 | Other | lineage1.1.3.2 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR19295647 | HR-TB | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR13392109 | HR-TB | lineage4.1.1.1 | None | SRR6398048 | HR-TB | lineage4.1.1.1 | ca | SRR1165628 | Other | La3;lineage4.9 | None | ERR1274685 | HR-TB | lineage4.1.1.1 | None | ERR4797184 | HR-TB | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR6398032 | HR-TB | lineage4.1.1.1 | ca | ERR3283040 | HR-TB | lineage4.9 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR4798431 | Other | lineage4.1;lineage4.9 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | ERR1274707 | HR-TB | lineage4.1.1.1 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR9787030 | RR-TB | lineage6.1.2 | None | ERR2517475 | Other | lineage4 | None | ERR502510 | HR-TB | lineage4.9 | None | ERR7821163 | Other | lineage2.2.1 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR2446382 | Other | lineage4 | None | SRR6397670 | HR-TB | lineage4.1.1.1 | ca | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR736834 | HR-TB | lineage4.9 | None | ERR6866022 | HR-TB | lineage4.8;lineage4.9 | None | SRR6397570 | HR-TB | lineage4.1.1.1 | ca | SRR5341299 | HR-TB | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR3283021 | MDR-TB | lineage4.9 | None | ERR363479 | Other | lineage4.9 | None | SRR1915487 | Other | La1.2.BCG | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR978754 | RR-TB | lineage4.8 | None | ERR978761 | Other | lineage4.8 | None | ERR473334 | HR-TB | lineage4.9 | None | SRR6397996 | HR-TB | lineage4.1.1.1 | ca | SRR6397735 | HR-TB | lineage4.1.1.1 | ca | ERR369159 | Other | lineage4.9 | None | ERR4831841 | HR-TB | lineage2.2.1;lineage4.4.2 | None | SRR6398033 | HR-TB | lineage4.1.1.1 | ca | ERR971389 | Other | lineage4.9 | None | ERR181824 | MDR-TB | lineage4.9 | None | ERR363446 | Other | lineage4.9 | None | ERR11068181 | HR-TB | lineage4.1.1.1 | None | ERR3797080 | Sensitive | lineage4.9 | None | SRR6398110 | HR-TB | lineage4.1.1.1 | ca | SRR28683948 | HR-TB | lineage4.1.1.1 | None | ERR11252664 | Other | lineage2.2.1 | None | ERR11252612 | Other | La3;lineage4.9 | None | SRR12708416 | Sensitive | None | SRR21733183 | RR-TB | lineage1.1.2 | None | ERR3797029 | Other | lineage4.9 | None | SRR24827307 | HR-TB | lineage4.1.1.1 | None | SRR3675441 | RR-TB | lineage4.9 | None | ERR363449 | Other | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR1274711 | HR-TB | lineage4.1.1.1 | None | ERR978755 | RR-TB | lineage4.8 | None | ERR779852 | HR-TB | lineage4.9 | None | ERR4817998 | Other | lineage3 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR6398124 | HR-TB | lineage4.1.1.1 | ca | SRR6046385 | Sensitive | lineage4.9 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | SRR23961549 | Other | La1.2 | None | ERR4024991 | HR-TB | lineage4.8;lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR3275450 | Other | lineage4 | None | SRR10808668 | Other | lineage2.2.1 | None | ERR363499 | Other | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | ERR363421 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | ERR2693252 | HR-TB | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR6397723 | HR-TB | lineage4.1.1.1 | ca | ERR1274713 | HR-TB | lineage4.1.1.1 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR1274658 | HR-TB | lineage4.1.1.1 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR1274700 | HR-TB | lineage4.1.1.1 | None | ERR978757 | RR-TB | lineage4.8 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR369163 | Other | lineage4.9 | None | SRR6397998 | HR-TB | lineage4.1.1.1 | ca | ERR1274665 | HR-TB | lineage4.1.1.1 | None | ERR1274705 | HR-TB | lineage4.1.1.1 | None | SRR5341313 | Other | La1.7;lineage4.9;lineage7 | None | ERR4769508 | RR-TB | lineage4.9 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR6397531 | HR-TB | lineage4.1.1.1 | ca | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR6397523 | HR-TB | lineage4.1.1.1 | ca | SRR16627752 | RR-TB | lineage4.4 | None | ERR373946 | Other | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR1274704 | HR-TB | lineage4.1.1.1 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR3797019 | Other | La1.8.1 | None | ERR1274660 | HR-TB | lineage4.1.1.1 | None | SRR6046397 | RR-TB | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR6397534 | HR-TB | lineage4.1.1.1 | ca | SRR11662694 | Other | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR6397522 | HR-TB | lineage4.1.1.1 | ca | SRR6397757 | HR-TB | lineage4.1.1.1 | ca | ERR3797063 | Other | La3;lineage4.9 | None | SRR1175508 | Sensitive | lineage4.9 | None | ERR926160 | Other | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SRR3675580 | Sensitive | lineage4.9 | None | ERR4811030 | Other | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR1274708 | HR-TB | lineage4.1.1.1 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | SRR6397984 | HR-TB | lineage4.1.1.1 | ca | ERR349299 | Other | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6397922 | HR-TB | lineage4.1.1.1 | ca | SRR6397345 | HR-TB | lineage4.1.1.1 | ca | SRR6397510 | HR-TB | lineage4.1.1.1 | ca | ERR4814639 | HR-TB | lineage4.9 | None | ERR363498 | Other | lineage4.9 | None | SRR6046210 | Other | lineage4.9 | None | SRR3675585 | HR-TB | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR6398044 | HR-TB | lineage4.1.1.1 | ca | SRR1180319 | Sensitive | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR1274677 | HR-TB | lineage4.1.1.1 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR1180250 | Other | lineage4.9 | None | ERR1274667 | HR-TB | lineage4.1.1.1 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR12006550 | Other | lineage1.2.1.2 | None | ERR4796254 | Other | lineage4.9 | None | ERR3287501 | MDR-TB | lineage4.1.1.1;lineage4.3.4.2 | None | SRR5341432 | Other | La1.7;lineage4.9;lineage7 | None | SRR6397689 | HR-TB | lineage4.1.1.1 | ca | SRR12708384 | Sensitive | lineage4.9 | None | SRR10808399 | Sensitive | lineage4.9 | None | ERR1274662 | HR-TB | lineage4.1.1.1 | None | ERR1274688 | HR-TB | lineage4.1.1.1 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR1274671 | HR-TB | lineage4.1.1.1 | None | SRR3675387 | Other | lineage4.9 | None | ERR1274718 | HR-TB | lineage4.1.1.1 | None | SRR5341453 | Other | lineage4.9 | None | ERR4830353 | HR-TB | La1.7 | None | ERR4812155 | Other | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR13392110 | HR-TB | lineage4.1.1.1 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR363502 | Other | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR473332 | Other | lineage4.9 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | ERR1274701 | HR-TB | lineage4.1.1.1 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR3675222 | Other | La1.7 | None | ERR1274655 | HR-TB | lineage4.1.1.1 | None | ERR363447 | Other | lineage4.9 | None | SRR1158918 | Other | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | ERR978746 | RR-TB | lineage4.8 | None | SRR1180137 | RR-TB | lineage2.2.1 | None | ERR1274676 | HR-TB | lineage4.1.1.1 | None | SRR6398084 | HR-TB | lineage4.1.1.1 | ca | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR6397967 | HR-TB | lineage4.1.1.1 | ca | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR6397712 | HR-TB | lineage4.1.1.1 | ca | ERR926155 | Other | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR6398001 | HR-TB | lineage4.1.1.1 | ca | SRR7496523 | Other | lineage4.7 | None | ERR978760 | RR-TB | lineage4.8 | None | ERR502511 | HR-TB | lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR28381186 | HR-TB | lineage4.1.1.1 | None | SRR28514690 | HR-TB | lineage4.1.1.1 | None | ERR11252736 | Other | lineage4.9 | None | SRR28351339 | MDR-TB | lineage4 | None | ERR212001 | HR-TB | None | ERR349300 | Other | lineage4.9 | None | ERR6358979 | HR-TB | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | SRR19318142 | HR-TB | lineage4.1.1.1 | None | ERR4797474 | Other | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | SRR6046611 | Sensitive | lineage4.9 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1181403 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR4818252 | HR-TB | lineage4.1.1.2 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR1274659 | HR-TB | lineage4.1.1.1 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR6397979 | HR-TB | lineage4.1.1.1 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR1274663 | HR-TB | lineage4.1.1.1 | None | ERR4798099 | HR-TB | lineage4.9 | None | ERR1274657 | HR-TB | lineage4.1.1.1 | None | ERR400320 | Sensitive | lineage4.9 | None | ERR212033 | Other | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR1183049 | RR-TB | lineage2.2 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR6397786 | HR-TB | lineage4.1.1.1 | ca | ERR1274670 | HR-TB | lineage4.1.1.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR6398134 | HR-TB | lineage4.1.1.1 | ca | ERR9786592 | Other | lineage4.3.4.2 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR6397924 | HR-TB | lineage4.1.1.1 | ca | ERR8479578 | HR-TB | lineage1.1.3.1 | None | ERR1063896 | HR-TB | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | ERR9786843 | Other | None | SRR28514692 | HR-TB | lineage4.1.1.1 | None | ERR4796577 | HR-TB | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR6866807 | RR-TB | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | ERR1274680 | HR-TB | lineage4.1.1.1 | None | ERR1274696 | HR-TB | lineage4.1.1.1 | None | ERR978733 | RR-TB | lineage4.8 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR1274717 | HR-TB | lineage4.1.1.1 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | ERR373945 | Other | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR6397915 | HR-TB | lineage4.1.1.1 | ca | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR1274687 | HR-TB | lineage4.1.1.1 | None | SRR1181256 | Other | lineage4.9 | None | ERR702405 | HR-TB | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR6398105 | HR-TB | lineage4.1.1.1 | ca | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR3797065 | RR-TB | lineage4.9 | None | SRR6398114 | HR-TB | lineage4.1.1.1 | ca | ERR4769554 | RR-TB | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None |
|---|
