EBG00000313325 - n.78delT


Drug resistance types
143 Sensitive 5 RR-TB 61 HR-TB 13 MDR-TB 12 Pre-XDR-TB 0 XDR-TB 87 Other
lineage Counts
lineage Count
lineage4.1.2.1 8
lineage2.2.1 14
lineage1.2.1.2 1
lineage4.9 76
La1.8.1 2
lineage4 111
49
lineage4.1 2
lineage4;lineage2.2 1
lineage4.1.2 3
lineage4.3.4.2.1 5
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage4.1.1.3 1
lineage1.2.1.1 1
lineage2.1 1
lineage4.1.1 1
lineage4.6.2.2 2
lineage3.1.3 1
lineage3 7
lineage1.1.1 1
lineage4.2.1 3
lineage5.1.4 1
lineage1.1.2 4
lineage4.1.1.2 1
lineage4.3.3 4
lineage4.3.2.1 3
lineage2.2.1.1 3
lineage4.9;lineage2.1 1
lineage4.8 2
lineage4.5;lineage2.2 1
lineage4.8.1 1
lineage4.4.1.2 1
lineage4;lineage3.1 1
lineage4.4.1.1 2
La1.2 1
lineage4.5 1
lineage2.2.1.2 1
lineage1.1.3.1 1
lineage4.4.1.1.1 1
spoligotype Counts
spoligotype Count
None 321
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR21240055 Other lineage4.1.2.1 None
SRR2010299 Pre-XDR-TB lineage2.2.1 None
SRR20969475 Other lineage1.2.1.2 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR16156775 Other lineage4.9 None
SRR1791747 Other La1.8.1 None
SRR19295647 Sensitive lineage4.9 None
SRR21677886 Sensitive lineage4.9 None
SRR8692867 Other lineage4.9 None
SRR8692790 RR-TB lineage4 None
SRR8692812 Other lineage4.9 None
SRR8692905 HR-TB None
SRR8692800 Other lineage4 None
SRR8692825 Other lineage4.9 None
SRR8692882 HR-TB lineage4.9 None
SRR8692887 Other None
SRR12708416 Sensitive lineage4.1 None
SRR8692810 Other lineage4.9 None
SRR8692879 HR-TB lineage4.9 None
SRR8692863 Other lineage4;lineage2.2 None
SRR8692791 Other lineage4.9 None
SRR3675455 Sensitive lineage4 None
ERR4815655 Other lineage4.1.2 None
SRR3675473 Sensitive lineage4.9 None
SRR3675472 Sensitive lineage4.9 None
SRR3675477 Other lineage4.9 None
ERR4815298 Other lineage4.3.4.2.1 None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
SRR3675209 Sensitive lineage4.9 None
ERR4814396 Sensitive lineage4.1.1.3 None
SRR3675488 HR-TB None
ERR3275450 Other lineage4 None
SRR3675210 Sensitive lineage4.9 None
ERR4815471 Other lineage4.9 None
SRR3675222 Other None
ERR4814734 Other lineage1.2.1.1 None
SRR3675229 Other lineage4 None
SRR3675266 Sensitive lineage4.9 None
SRR3675501 HR-TB None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR702405 Sensitive lineage2.1 None
SRR3675246 Sensitive lineage4 None
SRR3675265 Other lineage4 None
SRR3675318 Other lineage4.9 None
ERR176580 Sensitive lineage4.3.4.2.1 None
SRR3675292 Sensitive lineage4 None
SRR3675279 Other None
SRR3675283 Sensitive lineage4.9 None
ERR4814976 Other lineage4.9 None
ERR4816113 Sensitive lineage4.1.1 None
SRR3675387 Sensitive None
SRR3675522 Other None
SRR3675541 Sensitive lineage4.9 None
ERR4816964 Other lineage4.9 None
SRR3675514 Sensitive lineage4.9 None
SRR3675537 Sensitive lineage4.9 None
SRR3675542 Other lineage4.9 None
ERR4816231 Other lineage4 None
SRR3675548 Sensitive lineage4.9 None
SRR3675553 Sensitive lineage4.9 None
ERR212034 HR-TB None
SRR3675577 Sensitive lineage4.9 None
ERR4816322 Other lineage4.9 None
ERR4816417 Other lineage4.9 None
SRR5341384 Sensitive lineage4.9 None
ERR216965 HR-TB lineage4.9 None
ERR4816702 RR-TB lineage4.6.2.2 None
ERR4816852 Other lineage4.9 None
ERR4815815 Sensitive lineage4 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR2513121 Sensitive lineage3.1.3 None
ERR4818710 Sensitive lineage4.9 None
ERR4817998 Other lineage3 None
ERR4817554 Other lineage1.1.1 None
ERR3275709 HR-TB lineage3 nl
ERR2512770 Other lineage4.2.1 None
ERR2513283 Other lineage5.1.4 None
ERR245675 Sensitive lineage1.1.2 None
ERR4818252 Other lineage4.1.1.2 None
ERR245794 HR-TB lineage4.3.4.2.1 None
SRR5341453 Sensitive None
SRR5153091 HR-TB lineage4.3.3 None
ERR2513724 Sensitive lineage4.3.2.1 None
ERR4818624 Other lineage4.3.4.2.1 None
SRR5341366 Sensitive lineage4 None
SRR5341396 Other lineage4 None
SRR5341387 Other lineage4 None
ERR4820290 Other lineage3 None
SRR5341425 Other lineage4 None
ERR4819357 Other lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR6152838 Other lineage2.2.1.1 ca
SRR5341437 Sensitive lineage4.9 None
SRR5341267 Pre-XDR-TB lineage3 None
SRR5341300 Other lineage4 None
SRR5341455 Sensitive lineage4 None
SRR5341296 Sensitive lineage4.9 None
SRR5341298 Sensitive lineage4 None
SRR5341308 Sensitive lineage4 None
SRR5341299 Sensitive lineage4 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR5341303 RR-TB lineage4 None
SRR5341319 Other lineage3 None
ERR4819933 Other lineage4.9 None
SRR5341310 Other lineage1.1.2 None
SRR5341323 Sensitive lineage4 None
ERR2446382 Other lineage4 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341345 Sensitive lineage4.9 None
SRR5341461 Sensitive lineage4 None
SRR5341467 Other lineage4 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
ERR2517475 Other lineage4 None
SRR5341469 Other lineage4 None
SRR6046210 Other lineage4 None
SRR6045519 HR-TB None
ERR502511 Sensitive lineage4.9;lineage2.1 None
SRR6045503 HR-TB None
ERR4821655 Sensitive lineage4 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR6046141 Other lineage4.9 None
SRR6045050 Sensitive lineage4.3.2.1 None
SRR6045795 HR-TB lineage2.2.1 None
SRR6045832 HR-TB lineage4.9 None
SRR6045892 Sensitive None
SRR6044835 Sensitive lineage4 None
SRR6044875 HR-TB lineage4.9 None
SRR6044876 Sensitive lineage4 None
SRR6045706 Sensitive lineage4 None
SRR6044819 Sensitive lineage4.9 None
SRR6045002 MDR-TB lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR6045371 Sensitive lineage4.2.1 None
SRR6046482 HR-TB None
SRR6046362 HR-TB None
ERR2851356 Sensitive lineage4.9 None
ERR4829530 Pre-XDR-TB lineage4.8 None
SRR6046460 HR-TB None
SRR6046737 Other lineage4.9 None
SRR6046729 Other None
SRR6046611 HR-TB lineage4.9 None
ERR323037 HR-TB lineage4 None
SRR6046863 Sensitive lineage1.1.2 None
SRR6511621 HR-TB None
SRR6046802 Other lineage4 None
SRR6046897 Sensitive lineage4 None
ERR485006 HR-TB lineage4.9 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4831657 MDR-TB lineage2.2.1 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR4831638 Sensitive None
SRR6832644 Other lineage4.3.3 None
ERR4831763 HR-TB lineage4.5;lineage2.2 None
SRR6789624 MDR-TB lineage4.1 None
SRR9970980 Other lineage4.1.2 None
ERR502943 HR-TB None
SRR9613550 HR-TB lineage4.1.2.1 None
ERR502510 Sensitive lineage4 None
SRR9970978 Sensitive lineage4.1.2 None
SRR9970979 Sensitive lineage4.8 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR9971114 Other lineage2.2.1 None
ERR323048 Pre-XDR-TB lineage4.9 None
SRR9971150 RR-TB lineage4.8.1 None
SRR7755654 Pre-XDR-TB lineage4.2.1 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR037234 Sensitive lineage4.9 None
ERR323066 Sensitive lineage4 None
ERR323085 Sensitive lineage4 None
ERR1035122 Sensitive None
ERR1023525 HR-TB lineage4 None
ERR067699 HR-TB lineage4 None
ERR1034634 HR-TB None
ERR1063855 Other lineage4 None
ERR10796571 Other lineage4.9 None
ERR1063883 Sensitive lineage4 None
ERR1063896 Sensitive None
ERR10796597 Other lineage4 None
ERR108471 HR-TB lineage4 None
ERR10796632 Other lineage4.3.3 None
ERR10796634 Other lineage4 None
ERR323115 Sensitive lineage4 None
ERR133825 Sensitive lineage4 None
ERR137286 Sensitive lineage4 None
ERR3273109 MDR-TB lineage4 None
ERR3283030 HR-TB lineage4.9 None
ERR3283014 HR-TB None
ERR3283028 Other None
ERR3283040 HR-TB None
ERR3283032 HR-TB None
ERR3283031 HR-TB None
ERR349296 Sensitive lineage4 None
ERR3283047 HR-TB None
ERR349265 Sensitive lineage4 None
ERR349298 Sensitive lineage4 None
ERR3283057 HR-TB lineage4 None
ERR349264 Sensitive lineage4 None
ERR349266 Sensitive lineage4.9 None
ERR349299 Sensitive lineage4 None
ERR349330 Sensitive lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR363421 Sensitive lineage4 None
ERR363426 Sensitive lineage4 None
ERR363445 Sensitive lineage4 None
ERR363437 Sensitive lineage4 None
ERR363446 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363499 Sensitive lineage4 None
ERR363479 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363456 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR363498 Sensitive lineage4 None
ERR363490 Sensitive lineage4 None
ERR369151 Sensitive lineage4.9 None
ERR363500 Sensitive lineage4 None
ERR363506 Sensitive lineage4 None
ERR363509 Sensitive lineage4 None
ERR363502 Sensitive lineage4 None
ERR369158 Sensitive lineage4 None
ERR369156 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR3797060 Other La1.8.1 None
ERR369162 Sensitive lineage4 None
ERR369163 Sensitive lineage4 None
ERR373945 HR-TB lineage4 None
ERR3797015 HR-TB None
ERR369159 Sensitive lineage4 None
ERR369160 Sensitive lineage4.9 None
ERR373946 Sensitive lineage4 None
ERR373947 Sensitive lineage4 None
ERR3797048 HR-TB None
ERR3797063 HR-TB None
ERR3797064 Sensitive None
ERR3797080 HR-TB lineage4.9 None
ERR3797079 Sensitive lineage4 None
ERR3797087 Sensitive lineage4 None
ERR3797081 Sensitive lineage4 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR400320 Sensitive lineage4 None
ERR400326 Sensitive lineage4 None
ERR4024991 Other None
ERR400336 Sensitive lineage4 None
ERR400345 Other lineage4 None
ERR473367 Sensitive lineage4.9 None
ERR405209 Sensitive lineage4 None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR4178309 Other lineage4.1.2.1 None
ERR473323 HR-TB lineage4.9 None
ERR4178161 Other lineage4.4.1.1 None
ERR4178226 Sensitive lineage4 None
ERR473303 Sensitive lineage4.9 None
ERR473332 Other lineage4 None
ERR473334 HR-TB lineage4.9 None
ERR4769418 Other La1.2 None
ERR4769442 HR-TB lineage4 None
ERR4797350 Sensitive lineage4.9 None
ERR4769474 HR-TB lineage4 None
ERR4796472 Pre-XDR-TB lineage2.2.1 None
ERR4796577 MDR-TB None
ERR4797184 Sensitive lineage4 None
ERR4797313 HR-TB None
ERR4769444 HR-TB lineage4.9 None
ERR4796254 Sensitive lineage4 None
ERR4796929 Sensitive lineage4 None
ERR4797193 HR-TB lineage1.1.2 None
ERR4797264 Sensitive None
ERR4799378 Sensitive lineage4 None
ERR4797474 Other None
ERR4798431 HR-TB None
ERR4798099 Other None
ERR4811031 Sensitive lineage4.5 None
ERR4799547 Sensitive lineage2.2.1 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR4811030 Sensitive None
ERR6359066 HR-TB lineage4 None
ERR4812155 Sensitive None
ERR6358979 Other None
ERR6358951 HR-TB lineage4 None
ERR6359069 Other lineage4.9 None
ERR6359070 Other lineage4.9 None
ERR6866547 Sensitive lineage4 None
ERR6359074 HR-TB lineage4.9 None
ERR6865446 Other lineage4.4.1.1 None
ERR6865513 Other lineage4.1.2.1 None
ERR6866022 Other None
ERR6866410 Sensitive None
ERR6865502 Sensitive lineage4 None
ERR736831 HR-TB lineage4.9 None
ERR6866639 Other None
ERR736837 Other lineage4.9 None
ERR736834 Sensitive lineage4 None
ERR751326 Sensitive lineage4 None
ERR736856 HR-TB lineage4 None
ERR736872 Sensitive lineage4 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR9634265 Sensitive None
ERR8665619 Pre-XDR-TB lineage2.2.1 None
ERR9786076 Sensitive lineage3 None
SRR1158918 Sensitive lineage4 None
SRR10808399 Sensitive lineage4 None
SRR10808490 Sensitive lineage2.2.1.1 None
SRR10809074 Sensitive lineage4 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR10315567 Other lineage2.2.1 None
SRR10808805 Sensitive None
SRR1175500 MDR-TB lineage4 None
SRR1173777 Other lineage4 None
SRR1173568 Other lineage4.9 None
SRR1175496 HR-TB lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
SRR1180996 HR-TB lineage4 None
SRR1175507 MDR-TB lineage4 None
SRR1175508 Other lineage4.9 None
SRR14801749 Sensitive None