Rv0006 - c.1725G>C
Drug resistance types
88 Sensitive
0 RR-TB
18 HR-TB
8 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
33 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 1 |
| lineage4.9 | 38 |
| La1.8.1 | 1 |
| lineage2.2.1 | 11 |
| lineage4 | 61 |
| 24 | |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.1 | 1 |
| lineage4.2;La1.7 | 1 |
| lineage4.1.1 | 1 |
| lineage4;lineage2 | 1 |
| lineage4.8 | 1 |
| lineage4.2.1 | 1 |
| lineage3 | 1 |
| lineage1.1.1 | 1 |
| lineage4.9;lineage4.6.2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage2.2 | 3 |
| lineage4.1.2.1 | 2 |
| lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 153 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR11349186 | MDR-TB | lineage4.3.3 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR11462861 | Other | La1.8.1 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR14801749 | Sensitive | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR20632814 | Sensitive | lineage4 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR12708416 | Sensitive | lineage4.1 | None | SAMN03246267 | Pre-XDR-TB | lineage2.2.1 | cn | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR6824629 | Pre-XDR-TB | lineage2.2.1 | cn | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675229 | Other | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR3675279 | Other | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675318 | Other | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675387 | Sensitive | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675522 | Other | None | SRR3675547 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | ERR4816762 | Other | lineage4;lineage2 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR4817998 | Other | lineage3 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4819051 | Other | lineage4 | None | ERR4818607 | Sensitive | lineage4.9 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5341396 | Other | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR1035138 | MDR-TB | None | ERR4821655 | Sensitive | lineage4 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR4820580 | Sensitive | lineage4.9;lineage4.6.2 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR2517475 | Other | lineage4 | None | SRR6045503 | HR-TB | None | SRR6046397 | Other | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6044780 | Other | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046802 | Other | lineage4 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR6046897 | Sensitive | lineage4 | None | ERR4831739 | MDR-TB | lineage2.2.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4831638 | Sensitive | None | ERR4831719 | MDR-TB | lineage2.2.1 | None | ERR502943 | HR-TB | None | SRR9971114 | Other | lineage2.2.1 | None | SRR7496471 | Sensitive | None | ERR323115 | Sensitive | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR3283014 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR3283028 | Other | None | ERR3283031 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363447 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR363502 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR363506 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369163 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR373947 | Sensitive | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797087 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR4798823 | HR-TB | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4797313 | HR-TB | None | ERR4798431 | HR-TB | None | ERR4188247 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4812155 | Sensitive | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4811030 | Sensitive | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6358979 | Other | None | ERR6865502 | Sensitive | lineage4 | None | ERR736848 | HR-TB | None | ERR6866547 | Sensitive | lineage4 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10306004 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | SRR10808399 | Sensitive | lineage4 | None |
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