Rv3245c - c.-458G>C


Drug resistance types
43 Sensitive 20 RR-TB 68 HR-TB 33 MDR-TB 4 Pre-XDR-TB 0 XDR-TB 79 Other
lineage Counts
lineage Count
lineage2.2.1.1 4
lineage4.9 130
La1.7;M.canetti;lineage4.9 2
La1.7;lineage4.9 9
lineage1.1.3.1 1
lineage1.2.2.1;lineage4.4.1.1 2
M.canetti;lineage4.9 4
lineage4.4.1.1.1 1
lineage2.2.1 15
La1.6;La3;M.canetti;lineage4.2.2 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.8.1 1
lineage4.8 3
lineage4 6
lineage3 4
M.canetti;lineage1 1
lineage4.1.2.1 2
lineage2.2 4
lineage4.6.2.2 2
lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage4.1;lineage4.9 1
M.canetti;lineage4.9;lineage9 1
lineage4.5 1
La1.2.BCG 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage4.3.3 1
La2;lineage4.9 1
M.canetti;lineage4.6.4;lineage4.9 1
La3;lineage4.3.4 1
La1;lineage4.9 2
M.canetti;lineage4.2;lineage4.9 2
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La1.7 1
lineage1.1.1 1
lineage4.3.1;lineage4.9;lineage6 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
La1;lineage4.1.2 1
lineage2.2.1;lineage4.9 1
lineage4.9;lineage9 1
lineage2.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
1
lineage4.1.1.1 1
La2;lineage2.2 1
La1.7.1 1
lineage4.1.2 1
lineage4.1.1.3 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage2.2.1;lineage4 1
lineage4.9;lineage6.1.3 1
lineage1.1.2 1
lineage4.3.2.1 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage2.2.1.2;lineage7 1
La3;lineage4.9 1
lineage2;lineage4.9 1
La1.7;lineage4.3.4.1 1
lineage4.9;lineage7 1
lineage4.2;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
M.canetti;lineage4.2 1
spoligotype Counts
spoligotype Count
None 247
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1183106 RR-TB lineage2.2.1.1 None
ERR6359082 Other lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR6045503 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR736856 HR-TB lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR6866807 RR-TB lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
ERR11465711 Other lineage1.2.2.1;lineage4.4.1.1 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR13423649 Other lineage2.2.1 None
ERR363421 Other lineage4.9 None
SRR6046492 Other lineage4.9 None
SRR3675270 Other lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR6045217 Other lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR12142339 HR-TB lineage2.2.1 None
ERR4831617 MDR-TB lineage2.2.1 None
SRR5341300 HR-TB lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR1181251 Other lineage2.2.1 None
SRR3675446 RR-TB lineage4.9 None
SRR9971150 RR-TB lineage4.8.1 None
SRR1175487 Sensitive lineage4.9 None
ERR4816762 Sensitive lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
ERR373946 Other lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR6865502 Sensitive lineage4 None
ERR323066 HR-TB lineage4.9 None
ERR4816470 HR-TB lineage3 None
SRR10315567 HR-TB lineage2.2.1 None
SRR15014655 Other M.canetti;lineage1 None
ERR3797043 Sensitive lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR2446566 Other lineage4.9 None
SRR3675585 HR-TB lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR751326 Other lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR6045706 Other lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
ERR323037 Other lineage4.9 None
ERR3801503 Other lineage4.6.2.2 None
SRR5341453 Other lineage4.9 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR363445 Other lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR1180444 Sensitive lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR363453 Other lineage4.9 None
SRR1180147 RR-TB lineage2.2.1.1 None
ERR4797184 HR-TB lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR9786711 Other lineage4.6.2.2 None
ERR4798431 Other lineage4.1;lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
ERR363500 Other lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
SRR1183144 RR-TB lineage2.2.1 None
SRR5341299 HR-TB lineage4.9 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR1180410 Sensitive lineage4.9 None
ERR369159 Other lineage4.9 None
ERR502511 HR-TB lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR3797080 Sensitive lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6045053 Other lineage4 None
ERR752229 Other lineage4.5 None
ERR369162 Other lineage4.9 None
ERR4797474 Other lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
SRR3675441 RR-TB lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR212034 HR-TB La1.7;lineage4.9 None
SAMN02585910 RR-TB lineage2.2.1 None
ERR4810624 MDR-TB lineage2.2 None
ERR373945 Other lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR369158 Other lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR3675390 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR20969731 Other lineage2.2.1 None
ERR363506 Sensitive lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR5153091 HR-TB lineage4.3.3 None
ERR4799025 Other lineage4.8 None
ERR9119669 MDR-TB lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR369161 Sensitive lineage4.9 None
SRR3675586 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR363426 Sensitive lineage4.9 None
SRR6046897 Sensitive lineage4.9 None
SRR26399490 Sensitive lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
SRR1175052 HR-TB lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR1180355 Sensitive lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR11465714 Other lineage1.2.2.1;lineage4.4.1.1 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
SRR10809074 HR-TB lineage4.9 None
ERR4830353 HR-TB La1.7 None
SRR12416842 HR-TB lineage4.9 None
SRR14066533 RR-TB lineage1.1.1 None
ERR4769444 HR-TB lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR1180391 Sensitive lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
ERR3797086 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
ERR363447 Other lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR5311094 HR-TB lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR502510 HR-TB lineage4.9 None
SRR22251329 Other lineage2.1 None
ERR736834 HR-TB lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR349266 Other lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR161037 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR108125 RR-TB lineage4.9 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR363446 Other lineage4.9 None
ERR1063896 HR-TB None
SRR28351584 HR-TB lineage2.2.1 None
ERR349300 Other lineage4.9 None
ERR137286 Other lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR4816113 Sensitive lineage4.1.1.1 None
SRR3675385 Other La1.7;lineage4.9 None
ERR4817998 Other lineage3 None
SRR1180300 Sensitive lineage4.9 None
ERR2514327 HR-TB lineage4.8 None
SRR5341330 Other lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR369157 Sensitive lineage4.9 None
SRR6046046 Other lineage4.9 None
ERR4798099 HR-TB lineage4.9 None
ERR702405 HR-TB lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR6046878 Other lineage4.9 None
ERR349296 Sensitive lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR9970980 HR-TB lineage4.1.2 None
SRR20969708 HR-TB lineage2.2 None
ERR6866639 HR-TB lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
ERR363474 Sensitive lineage4.9 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR6866410 HR-TB lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR11466044 Other lineage4.1.1.3 None
SRR6044942 HR-TB lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR1184021 Sensitive lineage4.9 None
SRR6045548 Other lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR349265 Other lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
SRR6045347 Other lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR5341310 Other lineage1.1.2 None
SRR1181349 Sensitive lineage4 None
ERR349330 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
ERR124636 HR-TB lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR349299 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR349264 Other lineage4.9 None
ERR1035122 HR-TB lineage4.9 None
ERR363498 Other lineage4.9 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR181744 HR-TB La3;lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
ERR4796254 Other lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
ERR736831 Other lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
ERR363490 Other lineage4.9 None
ERR3283042 HR-TB lineage4.9 None
ERR11465802 Other La1.7;lineage4.3.4.1 None
ERR363502 Other lineage4.9 None
ERR363509 Sensitive lineage4.9 None
ERR4178226 Sensitive lineage4 None
SRR1175512 Sensitive lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
SRR10808730 Other lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR373947 Other lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR502889 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR473323 HR-TB lineage4.9 None
SRR1180172 RR-TB lineage2.2.1 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR403298 MDR-TB M.canetti;lineage4.2 None