Rv0668 - c.342G>C
Drug resistance types
94 Sensitive
9 RR-TB
28 HR-TB
22 MDR-TB
1 Pre-XDR-TB
1 XDR-TB
62 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2;lineage4.9 | 2 |
| lineage4.9 | 123 |
| lineage2.2.1 | 13 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage1;lineage4.9 | 1 |
| lineage4.2.1 | 1 |
| 2 | |
| lineage4.3.3;lineage4.8 | 4 |
| lineage4.3.4.1 | 2 |
| lineage3 | 2 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.4.1.1.1 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage4.3.3 | 3 |
| lineage2;lineage4.9 | 1 |
| lineage4.1.2.1 | 4 |
| La1.3 | 1 |
| lineage4.8 | 4 |
| La3;lineage4.9 | 5 |
| lineage4.1.1.2 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4 | 8 |
| lineage4.9;lineage7 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.1;lineage4.9 | 2 |
| lineage4.5 | 2 |
| lineage2.2 | 1 |
| lineage4.3;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.2;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.8.1 | 1 |
| lineage4.6.1.2 | 3 |
| lineage4.1.1.3 | 2 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.3.2.1 | 2 |
| lineage1.1.1;lineage4 | 1 |
| lineage5.1.4 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1.1.1 | 2 |
| La2;lineage2.2 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage6.1.2 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage2;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 217 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | SRR1140724 | Other | lineage2.2.1 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1175474 | Other | lineage4.9 | None | ERR4817915 | Other | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR4796577 | HR-TB | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | ERR4816762 | Sensitive | lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR4817998 | Other | lineage3 | None | SRR1181403 | Other | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | ERR369163 | Sensitive | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR363498 | Sensitive | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR12708384 | Sensitive | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR363490 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR3675279 | Sensitive | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | SRR1169249 | Other | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR4816964 | Sensitive | lineage4.9 | None | ERR363437 | Sensitive | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR4816852 | Other | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR6045371 | Other | lineage4.9 | None | SRR6046802 | Other | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | ERR363499 | Sensitive | lineage4.9 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | SRR1062920 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | ERR176751 | Other | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR373947 | Other | lineage4.9 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR11252612 | Other | La3;lineage4.9 | None | ERR2517475 | Other | lineage4 | None | SRR1181256 | Other | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | ERR363500 | Sensitive | lineage4.9 | None | ERR4816322 | Other | lineage4.9 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | ERR369162 | Other | lineage4.9 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR036207 | Other | lineage4.3;lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR3675265 | Other | lineage4 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR4821276 | Sensitive | lineage3 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR363506 | Sensitive | lineage4.9 | None | SRR1165628 | Other | La3;lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | SRR29050859 | Other | lineage4.9 | None | ERR4816548 | HR-TB | lineage4.5 | None | ERR4178226 | Sensitive | lineage4 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4814396 | Sensitive | lineage4.1.1.3 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | ERR4796351 | Sensitive | lineage4.9 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR5341323 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675387 | Other | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR12708416 | Sensitive | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR6046485 | Other | lineage4.9 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR212033 | Other | lineage4.9 | None | SRR9971046 | MDR-TB | lineage4.8 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4819241 | Other | lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | SRR1180345 | Other | lineage4.9 | None | SRR1140574 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR3275450 | Other | lineage4 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | SRR3675580 | Sensitive | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR363479 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR108125 | RR-TB | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR1173515 | Sensitive | lineage4.9 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR4819933 | Sensitive | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | ERR349298 | Sensitive | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | SRR6046594 | Sensitive | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | ERR9787030 | RR-TB | lineage6.1.2 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR1181351 | Sensitive | lineage4.9 | None |
|---|
