Rv0006 - c.231T>G
Drug resistance types
85 Sensitive
7 RR-TB
40 HR-TB
14 MDR-TB
4 Pre-XDR-TB
3 XDR-TB
117 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.6.2.2 | 1 |
| lineage4.9 | 120 |
| 9 | |
| La1.7 | 2 |
| lineage4.1;lineage4.9 | 1 |
| lineage3 | 3 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.8 | 2 |
| lineage4.9;lineage6.3 | 6 |
| lineage4.3.3 | 3 |
| La3;lineage2.1;lineage4.9 | 3 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage4.3.4.2.1 | 4 |
| lineage2.1;lineage4.9 | 3 |
| lineage4.8 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| lineage4.1.2 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| La1.8.1 | 2 |
| La3;lineage4.9 | 15 |
| La1.7;lineage4.9 | 5 |
| lineage1.1.2 | 2 |
| lineage2.2.1 | 9 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 3 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage4.2.2.2 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.1.1.1 | 3 |
| lineage4.2.1 | 1 |
| lineage4.3.2.1 | 3 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| lineage6.1.2 | 1 |
| La1.2.BCG | 1 |
| lineage4 | 6 |
| lineage2.1 | 2 |
| lineage4.1.2.1 | 5 |
| La1.7;M.canetti;lineage4.9 | 2 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| La3;lineage4 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage2.2 | 1 |
| La1.6;La3;lineage4.9 | 1 |
| lineage6.1.3 | 2 |
| lineage4.1.1.2 | 1 |
| lineage3.1.1 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| La1;lineage4.9 | 1 |
| lineage1.1.2;lineage4.1.2.1;lineage4.1.3 | 2 |
| La1;lineage4.1.2 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage2.2.1.1 | 1 |
| M.canetti;lineage2.2 | 2 |
| lineage4.8;lineage4.9 | 2 |
| lineage3.1;lineage9 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La2;lineage2.2 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La2;lineage4.9 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage4.3.4.2 | 1 |
| lineage3.1 | 1 |
| La1.7;lineage4.2 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage1.1.1 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 270 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4819809 | HR-TB | lineage4.6.2.2 | None | ERR6866807 | Other | lineage4.9 | None | SRR7535082 | Sensitive | lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | ERR4407463 | HR-TB | None | SRR1158918 | Sensitive | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | SRR3675222 | Other | La1.7 | None | ERR369162 | Other | lineage4.9 | None | SRR1196583 | Other | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | SRR28351347 | Other | lineage3 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR4817893 | Other | La3;lineage4.8 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | SRR29096882 | Sensitive | lineage4.9 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | ERR369151 | Other | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | ERR4817735 | Other | lineage4.8 | None | SRR1159378 | Other | lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1791747 | Other | La1.8.1 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR11466072 | Sensitive | lineage4.3.4.2.1 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR2693231 | Other | La1.6;La3;lineage4.6.4;lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR363490 | Sensitive | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | ERR4821655 | HR-TB | lineage4.9 | None | SRR29096879 | Sensitive | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR2513470 | Other | lineage4.2.2.2 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR751326 | Other | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR3283032 | Other | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR4818958 | Sensitive | lineage4.1.1.1 | gb | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR363447 | Other | lineage4.9 | None | SRR29017461 | Other | La3;lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | SRR3675234 | Other | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR9787030 | RR-TB | lineage6.1.2 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR349296 | Sensitive | lineage4.9 | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR1184381 | MDR-TB | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR28351339 | MDR-TB | lineage4 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | SRR12142341 | HR-TB | lineage2.1 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | ERR2693252 | Sensitive | lineage4.9 | None | ERR4796254 | Sensitive | lineage4.9 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | SRR1196566 | Other | lineage4.9 | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | SRR1180137 | Other | lineage2.2.1 | None | ERR363453 | Sensitive | lineage4.9 | None | ERR4817998 | Other | lineage3 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | ERR1063896 | Sensitive | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR502511 | Sensitive | lineage4.9 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR6358979 | Other | lineage4.9 | None | SRR1169194 | Other | lineage4.9 | None | SRR5341455 | Sensitive | lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR10315466 | RR-TB | lineage2.2.1 | None | ERR702405 | Sensitive | lineage4.9 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | SRR1165628 | Other | La3;lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR4830353 | Other | La1.7 | None | ERR4798099 | Other | lineage4.9 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6045526 | Other | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR349265 | Other | lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | SRR29231298 | Sensitive | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR6789626 | Other | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR6865513 | Other | lineage4.1.2.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675248 | Other | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR1196474 | Other | lineage3.1.1 | None | SRR1196546 | Other | lineage4.9 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | ERR4814683 | Sensitive | lineage1.1.2;lineage4.1.2.1;lineage4.1.3 | None | ERR4816100 | Sensitive | lineage1.1.2;lineage4.1.2.1;lineage4.1.3 | None | ERR363502 | Other | lineage4.9 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | ERR176751 | Other | lineage4.9 | None | ERR12015083 | Other | La3;lineage4.8 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | ERR3797065 | RR-TB | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | SRR5341298 | Sensitive | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR11252612 | Other | La3;lineage4.9 | None | ERR2514692 | Other | None | ERR212001 | HR-TB | None | ERR212033 | Other | lineage4.9 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR363500 | Sensitive | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | SRR1172951 | Other | lineage4.9 | None | SRR1196768 | MDR-TB | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | ERR369163 | Sensitive | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR3675265 | Other | lineage4 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR26399973 | Other | La3;lineage4.9 | None | SRR3675292 | Sensitive | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | SRR5341425 | Other | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | ERR3273109 | HR-TB | lineage4 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None | SRR1165699 | Other | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | SRR1173400 | Other | lineage4.9 | None | SRR1172234 | Other | lineage4.9 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | SRR12416840 | MDR-TB | lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR373947 | Other | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | SRR1184346 | HR-TB | lineage3.1 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR26399265 | Other | lineage2.2.1 | None | SRR1184294 | Other | lineage4.9 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | SRR1180996 | Sensitive | lineage4.9 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | ERR13265833 | Other | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | SRR1172857 | Other | None | ERR4817060 | Other | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR6045503 | Sensitive | lineage4.9 | None |
|---|
