Rv0006 - c.-134C>G
Drug resistance types
123 Sensitive
2 RR-TB
62 HR-TB
8 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
68 Other
lineage Counts
| lineage | Count |
|---|---|
| 72 | |
| lineage4.1.2.1 | 5 |
| lineage4 | 94 |
| lineage4.9 | 55 |
| lineage4.3.4 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2.2.1 | 8 |
| lineage2.2.1.1 | 3 |
| lineage4.1 | 2 |
| lineage1.2.1.1 | 1 |
| lineage2.1 | 3 |
| lineage4.1.1 | 1 |
| lineage4.8 | 3 |
| lineage4.3.4.2.1 | 2 |
| lineage3 | 3 |
| lineage5.1.4 | 1 |
| lineage4.2.1 | 2 |
| lineage4.3.2.1 | 3 |
| lineage1.1.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.9;lineage2.1 | 1 |
| lineage4.4.2;lineage2.2.1 | 1 |
| lineage4.1.2 | 1 |
| La1.8.1 | 2 |
| lineage4.5 | 1 |
| lineage2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 270 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4812155 | Sensitive | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6359045 | HR-TB | None | ERR6865502 | Sensitive | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6866022 | Other | None | ERR6866410 | Sensitive | None | ERR6866639 | Other | None | ERR736834 | Sensitive | lineage4 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR736837 | Other | lineage4.9 | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR736875 | HR-TB | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1173568 | Other | lineage4.9 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1173777 | Other | lineage4 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR14782405 | HR-TB | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675477 | Other | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR4814331 | Sensitive | lineage4.9 | None | SRR3675488 | HR-TB | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675501 | HR-TB | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR4815471 | Other | lineage4.9 | None | SRR3675234 | Other | None | SRR3675222 | Other | None | SRR3675229 | Other | lineage4 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675246 | Sensitive | lineage4 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675522 | Other | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR3675270 | HR-TB | None | SRR3675279 | Other | None | SRR3675283 | Sensitive | lineage4.9 | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | SRR3675387 | Sensitive | None | SRR3675455 | Sensitive | lineage4 | None | ERR4816964 | Other | lineage4.9 | None | ERR4816466 | HR-TB | None | SRR3675537 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | SRR3675577 | Sensitive | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR212034 | HR-TB | None | SRR3675571 | HR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR2229319 | Sensitive | lineage4.8 | dk | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4817998 | Other | lineage3 | None | ERR2513438 | Sensitive | lineage4.1.2.1 | None | SRR5341453 | Sensitive | None | ERR2513283 | Other | lineage5.1.4 | None | ERR2512770 | Other | lineage4.2.1 | None | SRR5341373 | HR-TB | lineage4 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR4819215 | Other | lineage1.1.2 | gb | SRR5341387 | Other | lineage4 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR4819357 | Other | lineage4.9 | None | SRR5341396 | Other | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341313 | HR-TB | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | ERR4819933 | Other | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341315 | Sensitive | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341469 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None | ERR2693231 | Other | None | ERR2517475 | Other | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | ERR2693230 | Other | None | SRR6045503 | HR-TB | None | ERR2693257 | Other | None | ERR2693254 | Other | None | SRR5535933 | HR-TB | None | SRR6045519 | HR-TB | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR2660539 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045555 | HR-TB | None | SRR6046141 | Other | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6046133 | HR-TB | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045217 | Other | lineage4 | None | SRR6044925 | Sensitive | lineage4.9 | None | SRR6045053 | Other | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6046210 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6046362 | HR-TB | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046594 | HR-TB | lineage4 | None | ERR4830353 | Other | None | SRR6046460 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6046644 | HR-TB | None | SRR6046802 | Other | lineage4 | None | ERR323037 | HR-TB | lineage4 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | SRR6511621 | HR-TB | None | SRR6046897 | Sensitive | lineage4 | None | ERR4832002 | Pre-XDR-TB | lineage2.1 | None | ERR4832052 | HR-TB | lineage2.1 | vn | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR502943 | HR-TB | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831638 | Sensitive | None | ERR4831841 | HR-TB | lineage4.4.2;lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR502510 | Sensitive | lineage4 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR7496471 | Sensitive | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323066 | Sensitive | lineage4 | None | ERR323045 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR1035122 | Sensitive | None | ERR1063896 | Sensitive | None | ERR133825 | Sensitive | lineage4 | None | ERR3283028 | Other | None | ERR137286 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283014 | HR-TB | None | ERR3283024 | Other | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283032 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283031 | HR-TB | None | ERR3283047 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR363490 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR373945 | HR-TB | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR3797014 | Other | None | ERR373946 | Sensitive | lineage4 | None | ERR3797015 | HR-TB | None | ERR373947 | Sensitive | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797044 | Other | None | ERR3797017 | Other | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797060 | Other | La1.8.1 | None | ERR3797061 | Other | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797063 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3797079 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4188247 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR400529 | Other | lineage3 | None | ERR4024991 | Other | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769452 | HR-TB | None | ERR4797184 | Sensitive | lineage4 | None | ERR4769450 | HR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR4796577 | MDR-TB | None | ERR4797264 | Sensitive | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797313 | HR-TB | None | ERR4798431 | HR-TB | None | ERR4798099 | Other | None | ERR4797474 | Other | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4811030 | Sensitive | None |
|---|
