Rv1630 - c.219C>T


Drug resistance types
75 Sensitive 21 RR-TB 74 HR-TB 28 MDR-TB 8 Pre-XDR-TB 3 XDR-TB 115 Other
lineage Counts
lineage Count
lineage4.9 155
lineage4.9;lineage9 2
lineage2.2.1 19
lineage4.3.2.1 2
lineage3 7
lineage4.9;lineage6.3 2
M.canetti;lineage4.2;lineage4.9 1
La2;lineage4.9;lineage9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage4.4.1.1 1
lineage1.2.1.2 1
lineage4.1.2.1 6
La2;lineage4.9 1
La3;lineage4.9 13
lineage2.2.1.1 5
lineage4 6
lineage4.2;lineage4.8.1;lineage4.9 2
La1.7;lineage4.2 1
lineage3;lineage4.9 1
lineage4.8;lineage4.9 2
lineage4.1.1.3;lineage4.9 2
M.canetti;lineage2.2 2
lineage2.2.1;lineage4.4.2 1
6
lineage4.8 3
La1.7;lineage4.9;lineage6 1
lineage4.3.4.2.1 8
lineage4.1.1.2 1
lineage3.1.3 1
lineage4.2;lineage4.9 3
La3;lineage2.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage4.1.1.3 5
lineage4.9.1 1
lineage4.1.2 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La1;lineage4.9 2
lineage4.8.1 1
lineage5.2 2
M.canetti;lineage2.2.2;lineage6.2 2
lineage6.1.1 2
lineage4.6.2.2 4
lineage4.3.2;lineage4.9 1
lineage1.1.2 2
lineage4.1;lineage4.9 2
lineage1.1.1;lineage4 1
lineage5.1.4 1
lineage4.6.3;lineage4.9 2
lineage3.1;lineage9 1
La1.2 2
lineage2.2 1
La1.8.1 1
lineage4.2.1 1
lineage3.1.2.1;lineage3.1.2.2 1
M.canetti;lineage4.9 1
lineage4.1;lineage4.8 2
La1.6;La3;lineage4.9 1
lineage1;lineage4.9 1
lineage4.5 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.7 1
lineage4.3.3 2
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La1;lineage4.1.2 1
lineage6.1.3 1
La3;lineage2.1;lineage4.9;lineage6.3 1
La3;lineage4 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage4.2.1.1;lineage4.3.3 1
lineage2.2.1;lineage4 1
lineage1.2.2.2;lineage4.3.4.2.1 1
lineage1.2.1.1 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3.1.2.2 1
spoligotype Counts
spoligotype Count
None 324
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR8692782 Other lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR3283032 Other lineage4.9 None
SRR3675477 Sensitive lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR1180996 Other lineage4.9 None
SRR3675318 Other lineage4.9 None
ERR2514552 Sensitive lineage3 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR323062 HR-TB lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR3675522 Other lineage4.9 None
SRR5341387 Other lineage4.9 None
SRR3675235 HR-TB lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6045706 Other lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
SRR12006550 Other lineage1.2.1.2 None
ERR4796254 Other lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR176751 HR-TB lineage4.9 None
ERR323039 MDR-TB La2;lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
SRR12708384 Sensitive lineage4.9 None
SRR5341453 Other lineage4.9 None
SRR5341296 Sensitive lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
ERR4797313 Sensitive lineage2.2.1 None
ERR4178226 Sensitive lineage4 None
ERR363453 Other lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
SRR5341455 Sensitive lineage4.9 None
ERR4797184 HR-TB lineage4.9 None
SRR1158918 Other lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
SRR3675247 Other lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR23961559 Other La1.7;lineage4.2 None
ERR363500 Other lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
SRR5341396 Other lineage3;lineage4.9 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR3675209 Sensitive lineage4.9 None
ERR349266 Other lineage4.9 None
ERR4831841 HR-TB lineage2.2.1;lineage4.4.2 None
ERR363446 Other lineage4.9 None
SRR8692887 Other None
ERR9786843 Other None
ERR11252612 Other La3;lineage4.9 None
SRR12708416 Sensitive None
ERR3335734 Pre-XDR-TB lineage4 pk
ERR3335747 Pre-XDR-TB lineage4 pk
ERR9786444 Sensitive lineage4.8 None
ERR137286 Other lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR4797474 Other lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR4818710 Sensitive lineage4.9 None
SRR6046611 Sensitive lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR363449 Other lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR2660516 Other lineage4.3.4.2.1 None
ERR2514327 HR-TB lineage4.8 None
ERR4818252 HR-TB lineage4.1.1.2 None
ERR4819357 Sensitive lineage4.9 None
ERR2513121 Sensitive lineage3.1.3 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR4809167 Sensitive lineage4.3.4.2.1 za
ERR2513724 Sensitive lineage4.3.2.1 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR4769493 Other lineage4.9 None
ERR363499 Other lineage4.9 None
ERR369158 Other lineage4.9 None
ERR363421 Other lineage4.9 None
ERR369151 Other lineage4.9 None
ERR2693252 HR-TB lineage4.9 None
ERR212033 Other lineage4.9 None
ERR550637 MDR-TB lineage4.1.1.3 None
ERR245758 Other lineage4.9.1 None
ERR349296 Sensitive lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
ERR6866639 HR-TB lineage4.9 None
ERR4821686 Sensitive lineage4.1.2.1 None
ERR4816466 HR-TB lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR4769433 RR-TB lineage4.9 None
ERR363506 Sensitive lineage4.9 None
ERR4816151 Other lineage4.8 None
SRR3675455 Sensitive lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR6046245 Other lineage4.9 None
SRR23961542 Other La1;lineage4.9 None
ERR369161 Sensitive lineage4.9 None
SRR9971150 RR-TB lineage4.8.1 None
ERR4769439 HR-TB lineage4.9 None
ERR9119483 Pre-XDR-TB lineage5.2 None
ERR373946 Other lineage4.9 None
ERR1063855 Other lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR14801749 HR-TB lineage4.9 None
ERR349330 Sensitive lineage4.9 None
ERR3799304 RR-TB lineage6.1.1 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR400336 Sensitive lineage4.9 None
SRR3675580 Sensitive lineage4.9 None
ERR4811030 Other lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR349264 Other lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR3273109 HR-TB lineage4 None
ERR363498 Other lineage4.9 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
SRR6046210 Other lineage4.9 None
ERR4815471 HR-TB lineage4.9 None
SRR6046863 Sensitive lineage1.1.2 None
ERR4819462 Sensitive lineage4.9 None
ERR6359069 HR-TB lineage4.9 None
ERR363490 Other lineage4.9 None
ERR4812155 Other lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR363502 Other lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
ERR363447 Other lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR373947 Other lineage4.9 None
SRR5341467 Other lineage4.9 None
ERR4798431 Other lineage4.1;lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
ERR4809127 Sensitive lineage4.3.4.2.1 za
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR2513283 Sensitive lineage5.1.4 None
SRR6045503 Other lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR11252664 Other lineage2.2.1 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR212001 HR-TB None
ERR11082350 MDR-TB lineage4.6.2.2 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR349300 Other lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR4817998 Other lineage3 None
ERR3797087 Sensitive lineage4.9 None
ERR9786656 Sensitive lineage4.1.2.1 None
SRR23961549 Other La1.2 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
SRR13423649 Other lineage2.2.1 None
ERR369157 Sensitive lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
ERR702405 HR-TB lineage4.9 None
ERR9786076 Other lineage3 None
SRR1183049 RR-TB lineage2.2 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR3675292 Sensitive lineage4.9 None
ERR4798504 RR-TB lineage3 None
SRR1791747 Other La1.8.1 None
SRR26937107 MDR-TB lineage2.2.1 None
ERR363474 Sensitive lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR3283031 Other La3;lineage4.9 None
SRR1172310 MDR-TB lineage4.9 None
SRR1181020 Other lineage2.2.1 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR2512770 Sensitive lineage4.2.1 None
ERR4799547 HR-TB lineage2.2.1 None
ERR990545 RR-TB lineage3 None
SRR5341300 HR-TB lineage4.9 None
ERR369163 Other lineage4.9 None
SRR3675210 Sensitive lineage4.9 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR4818536 Other lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR349265 Other lineage4.9 None
ERR400345 Other lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
ERR2660416 Other lineage4.3.4.2.1 None
ERR2693254 Other La1.6;La3;lineage4.9 None
SRR5341310 Other lineage1.1.2 None
ERR6865502 Sensitive lineage4 None
ERR323066 HR-TB lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR3675548 Sensitive lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
ERR3797063 Other La3;lineage4.9 None
ERR4811031 Other lineage4.5 None
SRR5341461 HR-TB lineage4.9 None
ERR349299 Other lineage4.9 None
ERR400326 Other lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR7821082 Sensitive lineage4.3.4.2.1 None
ERR1035122 HR-TB lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
SRR3675585 HR-TB lineage4.9 None
ERR9786507 RR-TB lineage4.7 None
ERR751326 Other lineage4.9 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
ERR2515970 Other lineage4.3.4.2.1 za
SRR1183111 HR-TB lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
SRR12708409 HR-TB lineage4.3.3 None
SRR3675387 Other lineage4.9 None
SRR1181289 RR-TB lineage2.2.1 None
ERR6358951 Sensitive lineage4.9 None
ERR3283014 Other La3;lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
SRR3675246 Other lineage4.9 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
SRR3675514 Sensitive lineage4.9 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR9970978 Other La1;lineage4.1.2 None
ERR6198317 Other La1.2 None
ERR369156 Sensitive lineage4.9 None
ERR9787153 Other lineage6.1.3 None
SRR1180137 RR-TB lineage2.2.1 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR4819809 HR-TB lineage4.6.2.2 None
ERR4872077 Pre-XDR-TB lineage5.2 None
SRR11349186 MDR-TB lineage4.3.3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR502510 HR-TB lineage4.9 None
ERR473323 HR-TB lineage4.9 None
ERR7821163 Other lineage2.2.1 None
SRR1180172 RR-TB lineage2.2.1 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR736834 HR-TB lineage4.9 None
SRR1183144 RR-TB lineage2.2.1 None
SRR5341299 HR-TB lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR363479 Other lineage4.9 None
ERR2199988 MDR-TB lineage4.1.1.3 None
ERR473334 HR-TB lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
ERR369159 Other lineage4.9 None
ERR736856 HR-TB lineage4.9 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR502511 HR-TB lineage4.9 None
ERR3283028 Other La3;lineage4 None
ERR4769442 Sensitive lineage4.9 None
ERR1063896 HR-TB None
ERR11252736 Other lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR987722 MDR-TB None
ERR369162 Other lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR736872 HR-TB lineage4.9 None
ERR373945 Other lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR4798099 HR-TB lineage4.9 None
SRR5341298 Other lineage4.9 None
ERR9787014 RR-TB lineage6.1.1 None
ERR4816964 HR-TB lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR1159378 Other lineage4.9 None
SRR3675265 Other lineage4 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6045832 Other lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
ERR4178309 Other lineage4.1.2.1 None
ERR9896144 Other lineage3 None
SRR7535082 Other lineage4.9 None
ERR2660417 Sensitive lineage1.2.2.2;lineage4.3.4.2.1 None
ERR4814734 Other lineage1.2.1.1 None
SRR26159047 RR-TB lineage4.6.3;lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR1169306 Other La3;lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
SRR6046897 Sensitive lineage4.9 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR124636 HR-TB lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
SRR1175508 Sensitive lineage4.9 None