Rv0005 - c.1914G>C


Drug resistance types
46 Sensitive 5 RR-TB 43 HR-TB 14 MDR-TB 4 Pre-XDR-TB 2 XDR-TB 90 Other
lineage Counts
lineage Count
La1.8.1 1
lineage4.9 109
lineage4.3.3 1
La3;lineage4.9 7
lineage2.2.1 5
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.3.2.1 3
lineage4.1;lineage4.9 1
lineage4.1.2.1 3
M.canetti;lineage2.2 2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.2;lineage4.9 2
lineage4 5
2
lineage4.1.1.1 1
lineage3 2
lineage4.3.4 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage2.2.1;lineage4 1
lineage1.1.2;lineage2.2.1 1
La1.7;lineage4.9 4
lineage4.2.2 1
lineage4.3.4.1 2
lineage1;lineage4.9 1
lineage4.1.1.3 3
La1.7.1;La1.7.X-unk4 1
lineage4.5 1
lineage4.4.1.1 1
La1.7.1;lineage4.9 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage1.2.1.2.1 2
lineage2.1;lineage4.9 2
lineage4.2;lineage4.8.1;lineage4.9 2
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage1.1.1;lineage4 1
La3;lineage4 1
lineage4.2.1.1;lineage4.3.3 1
lineage2.1;lineage4.9;lineage7 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.9;lineage7 3
La1.7;M.canetti;lineage4.9 3
lineage1.2.1.2 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.2;lineage4.6.3;lineage4.9 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage6.1.3 1
lineage5.1.4 1
lineage1.1.3.1 1
M.canetti;lineage4.9 2
lineage4.4.1.1.1 1
lineage1.2.1.1 1
lineage4.2.1 1
lineage4.8 1
lineage4.6.3;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
lineage2.2 1
spoligotype Counts
spoligotype Count
None 204
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3797073 Other La1.8.1 None
ERR4817731 HR-TB lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
ERR3797064 Other La3;lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR363502 Other lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR3675514 Sensitive lineage4.9 None
SRR6045050 Sensitive lineage4.3.2.1 None
ERR363453 Other lineage4.9 None
ERR363447 Other lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR4798431 Other lineage4.1;lineage4.9 None
ERR363500 Other lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
ERR4819241 Other lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR926155 Other lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR6045503 Other lineage4.9 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR971389 Other lineage4.9 None
SRR6045053 Other lineage4 None
ERR4796577 HR-TB None
SRR12708416 Sensitive None
ERR4816113 Sensitive lineage4.1.1.1 None
ERR4817998 Other lineage3 None
ERR176651 Other lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR369158 Other lineage4.9 None
SRR3675265 Other lineage4 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR349296 Sensitive lineage4.9 None
ERR4797284 Pre-XDR-TB lineage1.1.2;lineage2.2.1 in
ERR4188247 HR-TB lineage4.9 None
ERR926165 Other lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
ERR4811340 Sensitive lineage4.2.2 cn
ERR369163 Other lineage4.9 None
ERR11068099 Sensitive lineage4 None
ERR3283030 HR-TB lineage4.9 None
ERR349265 Other lineage4.9 None
ERR363426 Sensitive lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR11465353 Sensitive lineage4.3.4.1 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR4811031 Other lineage4.5 None
ERR4811030 Other lineage4.9 None
ERR4797471 Pre-XDR-TB lineage4.9 in
SRR3675477 Sensitive lineage4.9 None
ERR349299 Other lineage4.9 None
SRR6046382 RR-TB lineage2.2.1 None
ERR349264 Other lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR176779 HR-TB lineage4.9 None
SRR6045706 Other lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR4819877 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
SRR3675387 Other lineage4.9 None
ERR3283014 Other La3;lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR16058126 HR-TB lineage1.2.1.2.1 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR373947 Other lineage4.9 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR4769450 Other lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR363479 Other lineage4.9 None
ERR349266 Other lineage4.9 None
ERR161037 HR-TB lineage4.9 None
ERR369159 Other lineage4.9 None
ERR3283028 Other La3;lineage4 None
ERR363446 Other lineage4.9 None
ERR369162 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
SRR6046611 Sensitive lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR363449 Other lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
ERR2513724 Sensitive lineage4.3.2.1 None
ERR369157 Sensitive lineage4.9 None
SRR6046046 Other lineage4.9 None
ERR363499 Other lineage4.9 None
ERR369151 Other lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR4818929 HR-TB lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR3797048 Other La3;lineage4.9 None
ERR4178309 Other lineage4.1.2.1 None
ERR926156 Other lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR181887 Other lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR6865502 Sensitive lineage4 None
SRR22424854 RR-TB lineage4.9 None
ERR349330 Sensitive lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR3797063 Other La3;lineage4.9 None
SRR3675580 Sensitive lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR3445502 HR-TB lineage4.9;lineage7 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR323107 HR-TB lineage4.9 None
SRR12006550 Other lineage1.2.1.2 None
ERR363490 Other lineage4.9 None
ERR4812155 Other lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR926164 Other lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR14782405 HR-TB lineage4.9 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR9125789 HR-TB lineage1.2.1.2.1 None
ERR473332 Other lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR1023236 Other lineage6.1.3 None
ERR212125 HR-TB lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
SRR6046485 Other lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
SRR11662690 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR349300 Other lineage4.9 None
SRR9971114 Other lineage2.2.1 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
ERR363421 Other lineage4.9 None
ERR11465665 Other lineage4.1.1.3 None
SRR3675292 Sensitive lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
ERR363474 Sensitive lineage4.9 None
ERR4821686 Sensitive lineage4.1.2.1 None
ERR4816466 HR-TB lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR4814734 Other lineage1.2.1.1 None
ERR363506 Sensitive lineage4.9 None
ERR736848 Other lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
ERR926157 Other lineage4.9 None
SRR6046245 Other lineage4.9 None
ERR2512770 Sensitive lineage4.2.1 None
SRR6045555 Other lineage4.9 None
ERR4799025 Other lineage4.8 None
ERR369161 Sensitive lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR14782054 Other lineage4.9 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
ERR373946 Other lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR400345 Other lineage4.9 None
SRR6046897 Sensitive lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR176778 HR-TB lineage4.9 None
ERR926160 Other lineage4.9 None
SRR3675582 Other lineage4.9 None
ERR400336 Sensitive lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR400326 Other lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR2514552 Sensitive lineage3 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR363498 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR3675488 Other La1.7;lineage4.9 None
ERR1063858 HR-TB lineage4.9 None