Rv0668 - c.1011G>C
Drug resistance types
162 Sensitive
49 RR-TB
258 HR-TB
75 MDR-TB
58 Pre-XDR-TB
1 XDR-TB
204 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 85 |
| 201 | |
| lineage3.1 | 5 |
| La2 | 2 |
| lineage4 | 128 |
| lineage4.1.2.1 | 28 |
| La1.8.1 | 8 |
| lineage4.7 | 2 |
| lineage4.1.2 | 3 |
| lineage4.6.1.1 | 2 |
| lineage4.8 | 12 |
| lineage4.3.2.1 | 1 |
| lineage4.3.3 | 8 |
| lineage4.9 | 135 |
| La1 | 1 |
| lineage4.4.1.2 | 1 |
| La1.7.X-unk4 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
| lineage4.1.3 | 2 |
| lineage5.1.2 | 1 |
| lineage4;lineage3.1 | 1 |
| lineage3 | 29 |
| La1.2 | 2 |
| lineage4.9;La1.3 | 1 |
| lineage3.1.2 | 2 |
| lineage1.1.2 | 4 |
| lineage2 | 4 |
| lineage2.2.2 | 19 |
| lineage4.5 | 6 |
| lineage2.2 | 27 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage4.6.5 | 2 |
| lineage4.3.2 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.1.1.3 | 4 |
| lineage4.6.2.2 | 4 |
| lineage4.1.1 | 3 |
| lineage6.3.1 | 1 |
| lineage6.1.3 | 1 |
| lineage6 | 2 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage2.2.1.1 | 3 |
| lineage4;lineage2.2.2 | 1 |
| lineage4.4.2 | 2 |
| lineage2.2.2;lineage2.2.1 | 2 |
| lineage4.9;lineage2 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.4.1.1.1 | 1 |
| La1.6 | 1 |
| lineage4.4.1.1 | 4 |
| lineage4.3.4.1 | 1 |
| lineage1.1.1 | 1 |
| lineage4.2.1 | 4 |
| lineage1.2.1.2.1 | 2 |
| lineage4.2.2.1 | 1 |
| La1.4 | 1 |
| La1.7.1 | 1 |
| lineage4.1 | 3 |
| lineage4;lineage2.2 | 1 |
| lineage4.3.4.2.1 | 5 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage2.1 | 3 |
| lineage3.1.2.1 | 2 |
| lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | 1 |
| lineage1.1 | 2 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.8;La3 | 1 |
| lineage3.1.3 | 1 |
| lineage4.1.1.2 | 1 |
| lineage5.1.4 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4;lineage1.1 | 1 |
| lineage4.9;lineage3.1.2.1 | 1 |
| lineage4.9;lineage2.1 | 1 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage3.1.1 | 1 |
| lineage4.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 807 |
Geographic prevalence
Country level data for this variant is available for 9 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR323036 | HR-TB | None | SRR6981961 | Sensitive | lineage2.2.1 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR502524 | HR-TB | La2 | None | ERR502510 | Sensitive | lineage4 | None | ERR502889 | Other | None | ERR502532 | HR-TB | None | ERR502943 | HR-TB | None | ERR5311099 | HR-TB | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR5311077 | RR-TB | La1.8.1 | None | ERR5311090 | HR-TB | None | ERR5311081 | HR-TB | None | SRR7496471 | Sensitive | None | ERR323038 | HR-TB | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7496523 | Other | lineage4.7 | None | SRR7496517 | Other | None | SRR7496509 | Other | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR7535086 | Other | None | ERR323066 | Sensitive | lineage4 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR323039 | HR-TB | None | ERR323041 | HR-TB | None | ERR323053 | HR-TB | None | ERR323063 | HR-TB | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR323043 | HR-TB | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323085 | Sensitive | lineage4 | None | ERR067681 | HR-TB | None | ERR323107 | Other | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR1034652 | Other | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR1063883 | Sensitive | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063855 | Other | lineage4 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR1063896 | Sensitive | None | ERR108471 | HR-TB | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283010 | Other | La1 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR133825 | Sensitive | lineage4 | None | ERR133986 | HR-TB | None | ERR137286 | Sensitive | lineage4 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283024 | Other | None | ERR3283017 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283027 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283043 | Other | lineage4.9 | None | ERR3283036 | HR-TB | None | ERR3283049 | Sensitive | lineage4.9 | None | ERR3283051 | Other | lineage4.9 | None | ERR3439265 | Other | lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3283032 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283058 | Other | lineage4.9 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3439432 | Other | None | ERR349265 | Sensitive | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349299 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR363506 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR373945 | HR-TB | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR3797043 | HR-TB | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797017 | Other | None | ERR3797016 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797014 | Other | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797036 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3797044 | Other | None | ERR3797069 | Other | None | ERR3797060 | Other | La1.8.1 | None | ERR3797061 | Other | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797086 | Other | lineage4.9 | None | ERR3797083 | HR-TB | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR400336 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR400350 | Sensitive | lineage4.9 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR400345 | Other | lineage4 | None | ERR4024991 | Other | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR403298 | HR-TB | lineage4 | None | ERR405209 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4188247 | HR-TB | None | ERR4188213 | HR-TB | La1.8.1 | None | ERR4188350 | HR-TB | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4407452 | Sensitive | lineage3 | None | ERR4407463 | HR-TB | None | ERR473303 | Sensitive | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR473332 | Other | lineage4 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797037 | Pre-XDR-TB | lineage3.1.2 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797264 | Sensitive | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4797313 | HR-TB | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4798099 | Other | None | ERR4798406 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797474 | Other | None | ERR4798431 | HR-TB | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798504 | Other | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4800341 | Other | lineage3 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4810598 | Sensitive | lineage2.2.1 | cn | ERR4811031 | Sensitive | lineage4.5 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4811022 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4811030 | Sensitive | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR4811105 | HR-TB | None | ERR4811493 | HR-TB | None | ERR5336148 | Other | None | ERR4811117 | Sensitive | lineage2.2.1 | cn | ERR4811142 | MDR-TB | None | ERR4812155 | Sensitive | None | ERR6358979 | Other | None | ERR6358837 | HR-TB | None | ERR6358951 | HR-TB | lineage4 | None | ERR6358991 | HR-TB | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359045 | HR-TB | None | ERR6359069 | Other | lineage4.9 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6865502 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR736837 | Other | lineage4.9 | None | ERR736835 | HR-TB | None | ERR736839 | Other | None | ERR6866022 | Other | None | ERR6866639 | Other | None | ERR702404 | HR-TB | None | ERR702406 | HR-TB | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736834 | Sensitive | lineage4 | None | ERR736848 | HR-TB | None | ERR736865 | HR-TB | None | ERR736867 | HR-TB | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR736872 | Sensitive | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR736874 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR8976043 | HR-TB | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR9117709 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9786604 | Other | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786843 | Other | None | ERR9786671 | Other | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9787165 | Other | lineage6 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR9787197 | Other | None | ERR9787336 | Other | lineage6 | None | ERR987722 | HR-TB | None | ERR9896144 | Other | lineage3 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR069989 | HR-TB | lineage2 | None | ERR990545 | Other | lineage3 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR1013554 | Pre-XDR-TB | lineage2.2 | None | SRR1013569 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013553 | Pre-XDR-TB | lineage2.2 | None | SRR1013567 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013568 | Pre-XDR-TB | lineage2.2 | None | SRR1013570 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013577 | MDR-TB | lineage2.2 | None | SRR1013578 | MDR-TB | lineage2.2 | None | SRR1013582 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013583 | HR-TB | lineage2.2 | None | SRR1013581 | Pre-XDR-TB | lineage2.2 | None | SRR1013590 | HR-TB | lineage2.2.1 | None | SRR1013584 | HR-TB | lineage2.2 | None | SRR1013595 | HR-TB | lineage3 | None | SRR1013589 | HR-TB | lineage2.2.1 | None | SRR1013598 | HR-TB | None | SRR1013597 | HR-TB | lineage2.2 | None | SRR1013596 | HR-TB | lineage3 | None | SRR1013601 | HR-TB | lineage2.2.1 | None | SRR1013600 | HR-TB | lineage2.2.1.1 | None | SRR1013599 | HR-TB | None | SRR1013603 | HR-TB | lineage2.2.1 | None | SRR1013607 | HR-TB | lineage2.2 | None | SRR1013610 | HR-TB | lineage4 | None | SRR1013602 | HR-TB | lineage2.2.1 | None | SRR1013609 | HR-TB | lineage4 | None | SRR1013604 | HR-TB | lineage2.2.1 | None | SRR1013608 | HR-TB | lineage2.2 | None | SRR1013617 | MDR-TB | None | SRR1013613 | HR-TB | lineage2.2.1 | None | SRR1013618 | MDR-TB | None | SRR1013622 | Pre-XDR-TB | lineage2.2 | None | SRR1013614 | HR-TB | lineage2.2 | None | SRR1013612 | HR-TB | lineage4 | None | SRR1013621 | Pre-XDR-TB | lineage2.2 | None | SRR1013629 | Pre-XDR-TB | lineage2.2 | None | SRR1013633 | MDR-TB | lineage2.2 | None | SRR1013630 | Pre-XDR-TB | lineage2.2 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR1013634 | MDR-TB | lineage2.2 | None | SRR1048868 | Pre-XDR-TB | lineage2.2.2 | None | SRR1047996 | MDR-TB | lineage2.2.2 | None | SRR1048853 | Pre-XDR-TB | lineage4;lineage2.2.2 | None | SRR1048866 | Pre-XDR-TB | lineage4.4.2 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1047993 | HR-TB | lineage2.2.1 | None | SRR1048852 | Pre-XDR-TB | lineage4.9 | None | SRR1048886 | MDR-TB | lineage2.2 | None | SRR1048869 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048870 | Pre-XDR-TB | lineage2.2 | None | SRR1048885 | MDR-TB | None | SRR1048966 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048965 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048985 | HR-TB | lineage2.2.1 | None | SRR1048969 | MDR-TB | lineage2.2.2 | None | SRR1048975 | HR-TB | lineage2.2.1 | None | SRR1048982 | HR-TB | None | SRR1048988 | HR-TB | lineage2.2 | None | SRR1048968 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SRR1048974 | HR-TB | lineage2.2.1 | None | SRR1048980 | HR-TB | lineage3 | None | SRR1048983 | HR-TB | None | SRR1048987 | HR-TB | lineage2.2.1 | None | SRR1048986 | HR-TB | lineage2.2.1 | None | SRR1048993 | HR-TB | lineage4.9 | None | SRR1048992 | HR-TB | lineage2.2.2 | None | SRR1048991 | HR-TB | lineage2.2.2 | None | SRR1048995 | HR-TB | lineage4.5 | None | SRR1048994 | HR-TB | lineage4.9 | None | SRR1048997 | HR-TB | lineage2.2.1 | None | SRR1048996 | HR-TB | lineage4.5 | None | SRR1049006 | MDR-TB | lineage2.2.2 | None | SRR1048998 | HR-TB | lineage2.2.1 | None | SRR1049005 | MDR-TB | lineage2.2.2 | None | SRR1049004 | MDR-TB | lineage2.2.2 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049022 | HR-TB | lineage4.9;lineage2 | None | SRR1049026 | Pre-XDR-TB | None | SRR1049040 | MDR-TB | lineage2.2.1 | None | SRR1049007 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049023 | HR-TB | lineage2.2 | None | SRR1049027 | Pre-XDR-TB | None | SRR1049041 | MDR-TB | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1141261 | MDR-TB | lineage4.9 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1144744 | HR-TB | lineage2.2.1 | None | SRR1144809 | HR-TB | lineage2.2.1 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1144759 | MDR-TB | lineage2.2 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1169194 | Other | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1172728 | MDR-TB | None | SRR1172234 | Other | None | SRR1172310 | HR-TB | None | SRR1172857 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172951 | Other | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173310 | MDR-TB | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173153 | HR-TB | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR1173384 | Other | lineage4 | None | SRR1173363 | HR-TB | None | SRR1173400 | Other | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173629 | Other | None | SRR1173568 | Other | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173706 | Other | lineage4.9 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1173778 | Other | None | SRR1173777 | Other | lineage4 | None | SRR1173788 | Other | None | SRR1175074 | MDR-TB | None | SRR1175049 | RR-TB | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175090 | Other | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1184294 | HR-TB | None | SRR1183049 | Other | lineage2.2 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1184388 | Other | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184380 | HR-TB | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1184372 | MDR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196566 | HR-TB | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR1196546 | HR-TB | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR12142341 | HR-TB | None | SRR12416824 | HR-TB | None | SRR13423544 | Other | lineage4.5 | None | SRR1196768 | MDR-TB | None | SRR13888750 | Other | La2 | None | SRR13861251 | RR-TB | lineage4.9 | None | SRR13861519 | Other | lineage4.9 | None | SRR13861528 | HR-TB | lineage4.9 | None | SRR13861571 | RR-TB | lineage4.9 | None | SRR13861646 | Other | lineage4.9 | None | SRR13861146 | Sensitive | lineage4.9 | None | SRR14334195 | Pre-XDR-TB | lineage2.2.1 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR14801720 | RR-TB | lineage4.8 | None | SRR14801749 | Sensitive | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR15368973 | Other | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR16149126 | MDR-TB | lineage4.2.2.1 | None | SRR1640750 | HR-TB | None | SRR16156832 | RR-TB | None | SRR16278274 | Other | La1.4 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR1791696 | Other | La1.8.1 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | SRR20632814 | Sensitive | lineage4 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969677 | HR-TB | lineage2 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR21469201 | Other | La1.7.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR11081258 | Other | lineage4.8 | None | SRR8692879 | HR-TB | lineage4.9 | None | SRR12708416 | Sensitive | lineage4.1 | None | ERR4815604 | HR-TB | None | SRR8692897 | Other | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | SRR8692905 | HR-TB | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675477 | Other | lineage4.9 | None | ERR176793 | Other | lineage4.1.1 | None | SRR3675465 | HR-TB | None | SRR6325445 | HR-TB | None | ERR1035239 | HR-TB | None | ERR158583 | HR-TB | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | SRR3675482 | HR-TB | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR3675502 | Other | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR161033 | HR-TB | None | SRR3675486 | HR-TB | None | ERR4815694 | Sensitive | lineage4.9 | None | SRR3675229 | Other | lineage4 | None | ERR3275450 | Other | lineage4 | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SAMN02360583 | HR-TB | lineage2.2.2 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675221 | HR-TB | None | ERR4815471 | Other | lineage4.9 | None | SRR3675236 | HR-TB | None | ERR1750907 | RR-TB | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR3675234 | Other | None | SRR3675265 | Other | lineage4 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | SRR3675279 | Other | None | ERR4815556 | RR-TB | lineage3 | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675318 | Other | lineage4.9 | None | SRR3675311 | Other | None | ERR4814976 | Other | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR3675383 | HR-TB | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR4815079 | RR-TB | lineage3 | None | ERR4816964 | Other | lineage4.9 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR176740 | HR-TB | None | SRR3675387 | Sensitive | None | ERR2229542 | Other | lineage4.8 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR4816991 | Sensitive | lineage4.9 | None | ERR3275220 | Other | lineage3 | nl | SRR3675542 | Other | lineage4.9 | None | SRR3675522 | Other | None | ERR4816999 | Other | None | ERR4816100 | Sensitive | lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | None | SRR3675547 | Other | lineage4.9 | None | ERR4816127 | Sensitive | lineage1.1 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR4816151 | Other | lineage4.8 | None | ERR2027263 | Other | lineage4 | None | SAMN02360581 | HR-TB | lineage2.2.1 | None | SRR3675545 | HR-TB | None | ERR4817069 | RR-TB | None | SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None | ERR2027290 | RR-TB | lineage3.1 | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR4816300 | Other | lineage4.1.2.1 | None | SRR3675550 | Other | None | SRR3675558 | HR-TB | None | ERR4816322 | Other | lineage4.9 | None | SRR3675572 | Other | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4816417 | Other | lineage4.9 | None | ERR4816466 | HR-TB | None | ERR212121 | HR-TB | None | ERR4816470 | Other | lineage3 | None | SRR3675574 | HR-TB | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816585 | Other | lineage2.2 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR3742665 | HR-TB | None | SAMN02360586 | HR-TB | lineage2.2.1 | None | ERR4816755 | Other | lineage4.1.1.3 | None | SAMN02360571 | HR-TB | lineage2.2.2;lineage2.2.1 | None | ERR4817204 | RR-TB | lineage4.9 | None | SAMN02360590 | MDR-TB | lineage2.2.2 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4816734 | Sensitive | lineage4.9 | None | ERR4816729 | Sensitive | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4816852 | Other | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SAMN02360574 | HR-TB | lineage2.2.1 | None | ERR4817915 | RR-TB | lineage4.9 | None | SRR7496472 | Other | None | ERR2513121 | Sensitive | lineage3.1.3 | None | SAMN02398710 | MDR-TB | lineage2.2.2 | None | ERR4817998 | Other | lineage3 | None | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | ERR4818021 | Other | La1.8.1 | None | ERR4818086 | Sensitive | lineage4.8 | None | ERR4818811 | Pre-XDR-TB | lineage2.2.1 | None | ERR2229143 | Other | lineage4.1.1 | None | ERR1035162 | Other | None | SAMN02360580 | HR-TB | lineage2.2.1 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR2513259 | Other | lineage3 | None | ERR4819051 | Other | lineage4 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4818347 | Other | lineage4.1.2 | None | ERR4818536 | Other | lineage4.9 | None | ERR4818615 | Other | None | ERR2513283 | Other | lineage5.1.4 | None | SAMN02360577 | HR-TB | lineage3 | None | ERR4818948 | Sensitive | lineage4.3.3 | gb | ERR2512770 | Other | lineage4.2.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007165 | MDR-TB | lineage3 | None | ERR4818583 | Other | lineage4.3.3 | None | ERR2446144 | Other | lineage3 | nl | ERR4818607 | Sensitive | lineage4.9 | None | SRR5007170 | RR-TB | lineage4.9 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | SRR5341453 | Sensitive | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR2513713 | Sensitive | lineage4 | gb | SRR5341373 | HR-TB | lineage4 | None | ERR4819198 | Other | lineage2.2.1 | None | SRR5341396 | Other | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR4819528 | RR-TB | lineage3 | None | SRR5341418 | Other | None | SAMN02360563 | Pre-XDR-TB | lineage2.2.2 | None | SRR5341425 | Other | lineage4 | None | SAMN02360564 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819462 | Other | lineage4 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR4820746 | RR-TB | lineage3 | None | SRR5341432 | HR-TB | lineage4 | None | ERR4820394 | Other | lineage4.3.4.2.1 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR2514552 | Sensitive | lineage3 | None | ERR2514390 | Sensitive | lineage4.9;lineage3.1.2.1 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341302 | HR-TB | None | ERR4819910 | Other | lineage4.9 | None | SRR5341313 | HR-TB | None | ERR4819933 | Other | lineage4.9 | None | ERR1023509 | Other | None | SRR5341310 | Other | lineage1.1.2 | None | ERR2446382 | Other | lineage4 | None | SRR5341315 | Sensitive | None | SRR5341323 | Sensitive | lineage4 | None | ERR4820586 | Other | lineage3 | gb | SRR5341345 | Sensitive | lineage4.9 | None | ERR4820043 | Sensitive | lineage4.1.2.1 | None | SRR5341333 | HR-TB | None | ERR6359082 | Other | lineage4.9 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02360585 | HR-TB | lineage4.5 | None | SRR5341467 | Other | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | ERR2693231 | Other | None | SRR5341469 | Other | lineage4 | None | ERR2517475 | Other | lineage4 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | ERR4821053 | Other | lineage3 | None | SRR5341470 | HR-TB | None | SRR6046210 | Other | lineage4 | None | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | ERR2693239 | HR-TB | None | ERR2693230 | Other | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR6045503 | HR-TB | None | ERR278594 | HR-TB | None | ERR4821143 | RR-TB | lineage4.9 | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR6045526 | HR-TB | None | ERR4821276 | Other | lineage3 | None | ERR4821176 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821254 | Sensitive | lineage4.9 | None | ERR4821195 | Sensitive | lineage4.9 | None | SRR6044790 | HR-TB | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR6045555 | HR-TB | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6045892 | Sensitive | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR4821550 | Other | lineage2.2.1 | None | ERR4821655 | Sensitive | lineage4 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6046133 | HR-TB | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6044838 | Other | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044855 | Other | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6045952 | HR-TB | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6046225 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045327 | HR-TB | None | SRR6045399 | Other | None | SRR6045264 | Sensitive | lineage2.2.1 | None | SRR6046066 | HR-TB | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6325442 | HR-TB | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046250 | Other | lineage4.9 | None | SRR6046305 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | ERR3275196 | Other | lineage2.2.1 | nl | SRR6325444 | HR-TB | None | SRR6046385 | Other | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR6046482 | HR-TB | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | SRR6046514 | HR-TB | None | SRR6046492 | Other | None | SRR6325448 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046594 | HR-TB | lineage4 | None | ERR323037 | HR-TB | lineage4 | None | SRR6046824 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6511621 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | SRR6046644 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046802 | Other | lineage4 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR294248 | HR-TB | None | ERR4831117 | HR-TB | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831638 | Sensitive | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831618 | MDR-TB | lineage2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR6785413 | Other | lineage2.2.1 | None | SRR6789626 | Other | None | SRR6832249 | Other | lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6832644 | Other | lineage4.3.3 | None | SRR6832685 | Pre-XDR-TB | lineage4.2.1.1 | None |
|---|
