Rv3457c - c.621G>C
Drug resistance types
90 Sensitive
11 RR-TB
32 HR-TB
12 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
57 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 118 |
| La1;lineage4.1.2 | 1 |
| lineage2.2.1 | 11 |
| lineage3.1.2.1 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.8;lineage4.9 | 2 |
| lineage3 | 7 |
| 4 | |
| La3;lineage4.9 | 9 |
| lineage4.6.2.2 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.3.2.1 | 2 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| La3;lineage4 | 1 |
| lineage2.2 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4 | 5 |
| La1;lineage2;lineage4.9 | 1 |
| lineage4.9;lineage9 | 2 |
| lineage4.1.2.1 | 3 |
| La2;lineage4.9;lineage9 | 1 |
| lineage4.2.1 | 1 |
| lineage1.1.3.1 | 1 |
| La3 | 2 |
| lineage6.1.1 | 2 |
| lineage5.1.2 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| La1.8.1 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.3.3 | 1 |
| lineage4.3.4.2 | 1 |
| La1;lineage4.9 | 2 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage1.1.2 | 2 |
| lineage3.1.3 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1.2 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| lineage6.1.3 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.3.4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 204 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341308 | Sensitive | lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR5341298 | Sensitive | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR987722 | MDR-TB | None | SRR29096448 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | SRR1184372 | MDR-TB | None | SRR6045002 | RR-TB | lineage4.9 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR363500 | Sensitive | lineage4.9 | None | SRR7535082 | Sensitive | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | ERR3283028 | Other | La3;lineage4 | None | ERR1063896 | Sensitive | None | ERR369158 | Other | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | SRR6046210 | Other | lineage4.9 | None | ERR6358979 | Other | lineage4.9 | None | SRR1196677 | Other | lineage2.2 | None | ERR2513259 | Other | lineage3 | None | ERR13285068 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | SRR29049025 | Sensitive | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4816470 | HR-TB | lineage3 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR5341453 | Other | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR1172817 | Other | La3 | None | ERR363447 | Other | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR373947 | Other | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | SRR28351339 | MDR-TB | lineage4 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | SRR30182471 | Sensitive | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR369162 | Other | lineage4.9 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR29097026 | Other | lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | SRR28351347 | Other | lineage3 | None | ERR9787014 | Other | lineage6.1.1 | None | SRR29096882 | Sensitive | lineage4.9 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR369163 | Sensitive | lineage4.9 | None | SRR1175074 | Other | None | SRR3675265 | Other | lineage4 | None | ERR9786592 | Other | lineage4.3.4.2 | None | SRR10315466 | RR-TB | lineage2.2.1 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR702405 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096935 | Sensitive | lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR363490 | Sensitive | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR4821655 | HR-TB | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR3797065 | RR-TB | lineage4.9 | None | SRR29050859 | Other | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR17832802 | HR-TB | lineage3 | None | ERR4796254 | Sensitive | lineage4.9 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR29096410 | Other | lineage4.9 | None | SRR1158918 | Sensitive | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | ERR4817998 | Other | lineage3 | None | SRR6044875 | Sensitive | lineage4.9 | None | ERR502511 | Sensitive | lineage4.9 | None | SRR1159378 | Other | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR5341455 | Sensitive | lineage4.9 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR3675292 | Sensitive | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR6866410 | Sensitive | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | SRR1184312 | Other | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR4798504 | RR-TB | lineage3 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | SRR29096150 | Other | lineage4.9 | None | SRR29096530 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR1172728 | RR-TB | La3 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None |
|---|
