Rv3596c - c.1536A>G
Drug resistance types
108 Sensitive
6 RR-TB
35 HR-TB
15 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
50 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 143 |
| La1.8.1 | 2 |
| lineage4.3.3 | 1 |
| lineage4.3.4 | 1 |
| lineage4.4.1.1.1 | 1 |
| La2;lineage2.2 | 1 |
| lineage2.2.1 | 10 |
| lineage4 | 6 |
| lineage2;lineage4.9 | 1 |
| lineage4.1.2 | 1 |
| lineage4.1.2.1 | 5 |
| lineage2.2.1;lineage4.9 | 2 |
| La2;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage3.1 | 1 |
| lineage6.1.2 | 1 |
| lineage4.8;lineage4.9 | 2 |
| lineage2.2.1.1 | 1 |
| lineage2.2.1;lineage4 | 2 |
| lineage4.9;lineage7 | 3 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage3 | 2 |
| lineage2.2 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| 1 | |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage1.1.2 | 2 |
| lineage1;lineage4.9 | 1 |
| lineage4.8 | 1 |
| lineage4.1.1.2 | 1 |
| La1.2.BCG | 1 |
| La1.7;lineage4.9 | 3 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage4.6.2.2 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage6.1.3 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 216 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4796254 | Sensitive | lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR387051 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR3675265 | Other | lineage4 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR5341455 | Sensitive | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | ERR4178309 | Other | lineage4.1.2.1 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR363490 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4.9 | None | SRR3675582 | Other | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR6866639 | Other | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR28351442 | HR-TB | lineage3.1 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | ERR9787030 | RR-TB | lineage6.1.2 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR28351342 | HR-TB | lineage2.2.1;lineage4 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR363500 | Sensitive | lineage4.9 | None | SRR7535082 | Sensitive | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR1158918 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR4817998 | Other | lineage3 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR369163 | Sensitive | lineage4.9 | None | ERR1063896 | Sensitive | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR1159378 | Other | lineage4.9 | None | ERR9119669 | HR-TB | lineage4.9 | None | ERR9786592 | Other | lineage4.3.4.2 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR702405 | Sensitive | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR6865502 | Sensitive | lineage4 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR161037 | Other | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | SRR3675280 | RR-TB | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR1915487 | Other | La1.2.BCG | None | SRR1180996 | Sensitive | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR28351339 | MDR-TB | lineage4 | None | SRR10808730 | Other | lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR6046385 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | ERR926155 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR28351347 | Other | lineage3 | None | SRR1180345 | Other | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | ERR502511 | Sensitive | lineage4.9 | None | ERR6358979 | Other | lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | ERR11466072 | Sensitive | lineage4.3.4.2.1 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR349265 | Other | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR11465279 | Sensitive | lineage4.3.4.1 | None | ERR3273109 | HR-TB | lineage4 | None | ERR926163 | Other | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR1181349 | Sensitive | lineage4 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR363447 | Other | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR5341298 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None |
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