Rv0006 - c.195C>G
Drug resistance types
58 Sensitive
3 RR-TB
78 HR-TB
12 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
44 Other
lineage Counts
| lineage | Count |
|---|---|
| 67 | |
| lineage4.8 | 16 |
| lineage4.9 | 19 |
| lineage4 | 58 |
| lineage4.2.1 | 2 |
| lineage4.3.2.1 | 2 |
| lineage4.8;lineage4.3.3 | 3 |
| lineage1.1.2 | 1 |
| La1.6 | 1 |
| lineage2.2.1 | 5 |
| lineage2.2 | 2 |
| La1.8.1 | 1 |
| lineage4.1.2.1 | 5 |
| La1.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage3 | 2 |
| lineage6 | 1 |
| lineage4.3.3 | 4 |
| lineage3.1 | 2 |
| lineage1.2.1.2 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage2.1 | 3 |
| lineage2 | 1 |
| lineage4.1.1 | 1 |
| lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | 1 |
| lineage4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 202 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045503 | HR-TB | None | ERR133909 | HR-TB | lineage4.8 | ru | ERR2693227 | Other | lineage4.9 | None | SRR6045519 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6044780 | Other | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6045217 | Other | lineage4 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6046492 | Other | None | SRR6356944 | Pre-XDR-TB | lineage4.8;lineage4.3.3 | None | SRR6046802 | Other | lineage4 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6356938 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR6046897 | Sensitive | lineage4 | None | ERR11268038 | Other | La1.6 | None | SRR6356992 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6831741 | Other | lineage4.8 | None | ERR323045 | HR-TB | None | SRR7645931 | Other | lineage4.8 | None | ERR323043 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR3283028 | Other | None | ERR3283014 | HR-TB | None | ERR3283021 | HR-TB | None | ERR11043168 | RR-TB | lineage4.8 | None | ERR3283047 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283055 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363447 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797015 | HR-TB | None | ERR3797067 | Other | La1.8.1 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797046 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR3797064 | Sensitive | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR403261 | HR-TB | lineage4.8 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR473332 | Other | lineage4 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR2514721 | Sensitive | lineage3 | gb | ERR4769521 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4798431 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4811022 | HR-TB | None | ERR12341701 | Other | lineage4.8 | None | ERR6866807 | HR-TB | lineage4 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6359045 | HR-TB | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR702404 | HR-TB | None | ERR9787030 | Sensitive | lineage6 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR11049971 | Other | lineage4.8 | None | ERR9634265 | Sensitive | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | SRR1173153 | HR-TB | None | SRR1172951 | Other | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172857 | MDR-TB | None | SRR1184294 | HR-TB | None | SRR1173400 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173788 | Other | None | SRR1175049 | RR-TB | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173384 | Other | lineage4 | None | SRR1173629 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1173778 | Other | None | SRR1175074 | MDR-TB | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184381 | MDR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184388 | Other | None | SRR1184380 | HR-TB | None | SRR1196546 | HR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196566 | HR-TB | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196768 | MDR-TB | None | SRR14782019 | Other | lineage4.8 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR14781928 | Other | lineage4.8 | None | SRR14782405 | HR-TB | None | SRR15368973 | Other | None | SRR14782413 | Other | lineage4.8 | None | SRR14801754 | Sensitive | lineage4.8 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR15014682 | MDR-TB | lineage4.8 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR16157123 | Other | lineage4.9 | None | SRR1710057 | Other | lineage2.1 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR18715288 | Other | lineage4.8 | None | SRR3675501 | HR-TB | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR11082907 | Other | lineage4.8 | None | ERR176779 | HR-TB | None | SRR3416776 | Other | lineage2.1 | None | SRR18715457 | Other | lineage4.8 | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | ERR176778 | HR-TB | None | SRR3675488 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675222 | Other | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675265 | Other | lineage4 | None | SRR3675292 | Sensitive | lineage4 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | ERR4816100 | Sensitive | lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR212125 | HR-TB | lineage4 | None | ERR4816151 | Other | lineage4.8 | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4816466 | HR-TB | None | ERR4816656 | HR-TB | None | SRR3675571 | HR-TB | None | ERR4817998 | Other | lineage3 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR2446566 | Other | lineage4.1 | None | ERR4819051 | Other | lineage4 | None | ERR234659 | HR-TB | None | ERR4818929 | HR-TB | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341313 | HR-TB | None | ERR6359082 | Other | lineage4.9 | None | SRR5341315 | Sensitive | None | SRR5341330 | HR-TB | None |
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