Rv3596c - c.663C>T
Drug resistance types
49 Sensitive
12 RR-TB
52 HR-TB
16 MDR-TB
6 Pre-XDR-TB
2 XDR-TB
82 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 114 |
| lineage2.2.1 | 14 |
| lineage1.1.3.2 | 1 |
| lineage4 | 2 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| M.canetti;lineage2.2 | 2 |
| lineage4.8 | 18 |
| 2 | |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.1.2.1 | 5 |
| lineage4.3.4.2 | 1 |
| lineage4.8;lineage4.9 | 2 |
| lineage4.4.1.1.1 | 1 |
| lineage2.2 | 2 |
| La1.8.1 | 2 |
| La3;lineage4.9 | 13 |
| lineage4.3.3 | 4 |
| lineage4.6.2.2 | 3 |
| lineage1.2.1.2 | 1 |
| lineage4.1.1.3 | 3 |
| lineage4.1;lineage4.9 | 1 |
| lineage5.1.2 | 1 |
| lineage4.1.1.1 | 2 |
| lineage3 | 5 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage2.2.2 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage1.1.2 | 2 |
| lineage4.3.2.1 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage4.2.1 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La3;lineage4 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.1.2 | 1 |
| lineage6.1.3 | 1 |
| lineage4.5 | 1 |
| lineage4.1;lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 219 |
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10809074 | HR-TB | lineage4.9 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR363445 | Other | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | ERR7821126 | Other | lineage1.1.3.2 | None | SRR3675246 | Other | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR363447 | Other | lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR473323 | HR-TB | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR349266 | Other | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4815705 | Sensitive | lineage4.8 | None | ERR369159 | Other | lineage4.9 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR363446 | Other | lineage4.9 | None | ERR11252736 | Other | lineage4.9 | None | ERR212001 | HR-TB | None | ERR137286 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR373945 | Other | lineage4.9 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR6046385 | Sensitive | lineage4.9 | None | ERR4820978 | Sensitive | lineage4.8 | gb | SRR11342673 | RR-TB | lineage4.3.4.2 | None | ERR4024991 | HR-TB | lineage4.8;lineage4.9 | None | ERR4821143 | Other | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR4798099 | HR-TB | lineage4.9 | None | SRR5341298 | Other | lineage4.9 | None | ERR4818974 | Sensitive | lineage4.8 | gb | ERR3797079 | Sensitive | lineage4.9 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4818536 | Other | lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR1180996 | Other | lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR363498 | Other | lineage4.9 | None | SRR3675585 | HR-TB | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR4815471 | HR-TB | lineage4.9 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | SRR14781862 | HR-TB | lineage4.8 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR363453 | Other | lineage4.9 | None | SRR5341455 | Sensitive | lineage4.9 | None | ERR4797184 | HR-TB | lineage4.9 | None | SRR1158918 | Other | lineage4.9 | None | ERR11049335 | Sensitive | lineage4.8 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR373947 | Other | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | ERR4798431 | Other | lineage4.1;lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR736834 | HR-TB | lineage4.9 | None | SRR23339977 | Sensitive | lineage4.8 | None | ERR6866022 | HR-TB | lineage4.8;lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR736856 | HR-TB | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR11252612 | Other | La3;lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR4817998 | Other | lineage3 | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR363499 | Other | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | ERR363421 | Other | lineage4.9 | None | ERR4816964 | HR-TB | lineage4.9 | None | ERR212033 | Other | lineage4.9 | None | SRR1159378 | Other | lineage4.9 | None | SRR16156804 | Sensitive | lineage4.9 | None | ERR6866639 | HR-TB | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR9896144 | Other | lineage3 | None | SRR23340091 | MDR-TB | lineage4.8 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR369163 | Other | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR6865502 | Sensitive | lineage4 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR323066 | HR-TB | lineage4.9 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | SRR3675580 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR1035122 | HR-TB | lineage4.9 | None | ERR323062 | HR-TB | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR5341387 | Other | lineage4.9 | None | SRR3675235 | HR-TB | lineage4.9 | None | ERR4796254 | Other | lineage4.9 | None | SRR8692863 | Other | lineage2.2;lineage4 | None | ERR176751 | HR-TB | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR5341453 | Other | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR3283014 | Other | La3;lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR6359069 | HR-TB | lineage4.9 | None | ERR11044377 | Sensitive | lineage4.8 | None | ERR363490 | Other | lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR16156775 | Other | lineage4.9 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | ERR4814748 | Other | lineage4.8 | None | SRR1165628 | Other | La3;lineage4.9 | None | ERR4820329 | Sensitive | lineage4.8 | gb | SRR6785510 | Sensitive | lineage4.8 | None | SRR1180137 | RR-TB | lineage2.2.1 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341425 | Other | lineage4.9 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | ERR363500 | Other | lineage4.9 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR363479 | Other | lineage4.9 | None | SRR6045503 | Other | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR1063896 | HR-TB | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | SRR6045795 | Other | lineage2.2.1 | None | ERR349300 | Other | lineage4.9 | None | SRR3675441 | RR-TB | lineage4.9 | None | ERR1465946 | Sensitive | lineage4.8 | ch | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR363449 | Other | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4817771 | Sensitive | lineage4.8 | gb | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | ERR9786076 | Other | lineage3 | None | ERR3797065 | RR-TB | lineage4.9 | None | SRR3675292 | Sensitive | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283031 | Other | La3;lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR990545 | RR-TB | lineage3 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR349265 | Other | lineage4.9 | None | ERR373946 | Other | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR1183965 | Sensitive | lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR2229198 | Sensitive | lineage4.8 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR124636 | HR-TB | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR4816548 | HR-TB | lineage4.5 | None | SRR5341308 | HR-TB | lineage4.9 | None | ERR3797063 | Other | La3;lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | SRR6832472 | Sensitive | lineage4.8 | None | ERR349264 | Other | lineage4.9 | None | SRR18714862 | Sensitive | lineage4.8 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR9786525 | RR-TB | lineage4.1;lineage4.8 | None | SRR6045706 | Other | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR2514709 | Sensitive | lineage4.8 | gb | ERR4818038 | HR-TB | lineage4.8 | gb |
|---|
