Rv3596c - c.663C>T
Drug resistance types
95 Sensitive
16 RR-TB
40 HR-TB
17 MDR-TB
14 Pre-XDR-TB
0 XDR-TB
68 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.6.2.2 | 3 |
| lineage2.2.1 | 25 |
| lineage4.8;lineage4.1 | 1 |
| lineage4.1.2.1 | 6 |
| lineage6.1.3 | 1 |
| lineage3 | 7 |
| La3 | 1 |
| lineage4 | 83 |
| lineage4.4.1.1.1 | 1 |
| lineage4.3.3 | 4 |
| 28 | |
| lineage4.9 | 33 |
| lineage2.2 | 5 |
| lineage1.2.1.2 | 1 |
| lineage4.2.1 | 3 |
| lineage4.8 | 22 |
| La1.8.1 | 2 |
| lineage2.2.2 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4;lineage2.2 | 1 |
| lineage4.4.2 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage4.1 | 1 |
| lineage4.3 | 1 |
| lineage5 | 2 |
| lineage4.1.1 | 1 |
| lineage4.5 | 1 |
| lineage1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage1.1.2 | 2 |
| lineage2.1 | 1 |
| lineage4.1.2 | 2 |
| lineage4.3.2.1 | 1 |
| lineage5.1.2 | 1 |
| lineage1.1.3.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 250 |
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9896144 | Other | lineage3 | None | ERR990545 | Other | lineage3 | None | SRR1169249 | Other | La3 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1167384 | Other | lineage4 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1169306 | Other | None | SRR1173568 | Other | lineage4.9 | None | SRR1173777 | Other | lineage4 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1183049 | Other | lineage2.2 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR14781862 | HR-TB | lineage4.8 | None | SRR16156775 | Other | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18714862 | Sensitive | lineage4.8 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR8692879 | HR-TB | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR8692790 | RR-TB | lineage4 | None | SRR8692905 | HR-TB | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR8692800 | Other | lineage4 | None | SRR8692899 | Other | lineage4.9 | None | SRR8692887 | Other | None | ERR176751 | HR-TB | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR4814312 | Other | lineage4 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR4815705 | Sensitive | lineage4.8 | None | SRR3675246 | Sensitive | lineage4 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | ERR4814748 | Other | lineage4.8 | None | ERR4815471 | Other | lineage4.9 | None | ERR4815502 | Other | lineage4.1 | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR3675292 | Sensitive | lineage4 | None | ERR4816964 | Other | lineage4.9 | None | ERR176568 | Other | lineage4.3 | None | ERR176643 | HR-TB | None | ERR4816967 | RR-TB | lineage5 | None | ERR4816466 | HR-TB | None | ERR4816113 | Sensitive | lineage4.1.1 | None | ERR212001 | HR-TB | None | ERR212033 | HR-TB | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4818655 | Other | lineage4.3.3 | None | ERR4818536 | Other | lineage4.9 | None | ERR2513438 | Sensitive | lineage4.1.2.1 | None | ERR4818393 | RR-TB | lineage3 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR4817998 | Other | lineage3 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4818811 | Pre-XDR-TB | lineage2.2.1 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR4819357 | Other | lineage4.9 | None | SRR5341461 | Sensitive | lineage4 | None | ERR4819217 | Other | lineage1.2.2.2 | None | SRR5341387 | Other | lineage4 | None | ERR4819462 | Other | lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR4820324 | Other | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341300 | Other | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341456 | Other | None | ERR4820151 | RR-TB | lineage4.8 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819933 | Other | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR23340091 | MDR-TB | lineage4.8 | None | SRR5341467 | Other | lineage4 | None | SRR5341469 | Other | lineage4 | None | ERR1465946 | Sensitive | lineage4.8 | ch | SRR6045503 | HR-TB | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR11049335 | Sensitive | lineage4.8 | None | ERR4821143 | RR-TB | lineage4.9 | None | SRR23339977 | Sensitive | lineage4.8 | None | ERR4821310 | Other | lineage5 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045706 | Sensitive | lineage4 | None | ERR4831618 | MDR-TB | lineage2.1 | None | SRR6046299 | HR-TB | None | SRR6046385 | Other | lineage4.9 | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046802 | Other | lineage4 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6511621 | HR-TB | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR6045384 | Other | lineage4.1.2 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR6785510 | Sensitive | lineage4.8 | None | SRR6832472 | Sensitive | lineage4.8 | None | ERR4818974 | Sensitive | lineage4.8 | gb | ERR4817771 | Sensitive | lineage4.8 | gb | ERR4818038 | HR-TB | lineage4.8 | gb | SRR9970980 | Other | lineage4.1.2 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR323085 | Sensitive | lineage4 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR323066 | Sensitive | lineage4 | None | ERR4820329 | Sensitive | lineage4.8 | gb | ERR11044377 | Sensitive | lineage4.8 | None | ERR1035122 | Sensitive | None | ERR1063855 | Other | lineage4 | None | ERR1063896 | Sensitive | None | ERR4820978 | Sensitive | lineage4.8 | gb | ERR137286 | Sensitive | lineage4 | None | ERR3283031 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR349264 | Sensitive | lineage4 | None | ERR3283047 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3283057 | HR-TB | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349265 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR3797063 | HR-TB | None | ERR369160 | Sensitive | lineage4.9 | None | ERR373945 | HR-TB | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR3797079 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR3797064 | Sensitive | None | ERR400345 | Other | lineage4 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR4024991 | Other | None | ERR4178226 | Sensitive | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4796254 | Sensitive | lineage4 | None | ERR2514709 | Sensitive | lineage4.8 | gb | ERR4799378 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4828884 | Sensitive | lineage4.8 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4798099 | Other | None | ERR4798431 | HR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359070 | Other | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6866022 | Other | None | ERR7821126 | Sensitive | lineage1.1.3.2 | None | ERR6866639 | Other | None | ERR736837 | Other | lineage4.9 | None | ERR736856 | HR-TB | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None |
|---|
