Rv3596c - c.663C>T


Drug resistance types
95 Sensitive 16 RR-TB 40 HR-TB 17 MDR-TB 14 Pre-XDR-TB 0 XDR-TB 68 Other
lineage Counts
lineage Count
lineage4 83
lineage4.9 33
lineage4.8 22
lineage4.9;lineage3.1.1 1
lineage4.4.2 1
lineage4.3.4.2.1 2
lineage4.1 1
lineage4.3 1
28
lineage5 2
lineage4.1.1 1
lineage4.1.2.1 6
lineage4.5 1
lineage4.3.3 4
lineage3 7
lineage1 1
lineage2.2.1 25
lineage1.2.2.2 1
lineage4.6.2.2 3
lineage1.1.2 2
lineage4.2.1 3
lineage4.1.2 2
lineage2.2 5
lineage2.1 1
lineage2.2.1.1 2
lineage4.3.2.1 1
La1.8.1 2
lineage5.1.2 1
lineage4.8;lineage4.1 1
lineage1.1.3.2 1
lineage6.1.3 1
lineage4.4.1.1.1 1
La3 1
lineage1.2.1.2 1
lineage2.2.2 1
lineage4;lineage2.2 1
spoligotype Counts
spoligotype Count
None 250
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675246 Sensitive lineage4 None
SRR3675209 Sensitive lineage4.9 None
ERR4815705 Sensitive lineage4.8 None
ERR171142 Other lineage4.9;lineage3.1.1 None
ERR4814748 Other lineage4.8 None
ERR4815301 Other lineage4.4.2 None
ERR4814312 Other lineage4 None
ERR161034 Other lineage4.3.4.2.1 None
ERR4815471 Other lineage4.9 None
SRR3675265 Other lineage4 None
ERR4815502 Other lineage4.1 None
ERR176568 Other lineage4.3 None
SRR3675292 Sensitive lineage4 None
ERR176643 HR-TB None
ERR4816967 RR-TB lineage5 None
ERR4816964 Other lineage4.9 None
ERR4816466 HR-TB None
ERR4816113 Sensitive lineage4.1.1 None
ERR212033 HR-TB None
SRR3675527 RR-TB lineage4.9 None
ERR212001 HR-TB None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR4816548 MDR-TB lineage4.5 None
ERR2229198 MDR-TB lineage4.8 None
ERR216965 HR-TB lineage4.9 None
ERR2513438 Sensitive lineage4.1.2.1 None
ERR4818655 Other lineage4.3.3 None
ERR4818710 Sensitive lineage4.9 None
ERR4817998 Other lineage3 None
ERR4818536 Other lineage4.9 None
ERR4818126 RR-TB lineage1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4818811 Pre-XDR-TB lineage2.2.1 None
ERR4818393 RR-TB lineage3 None
ERR4818522 Pre-XDR-TB lineage3 None
SRR5153091 HR-TB lineage4.3.3 None
SRR5007204 Other lineage4.1.2.1 None
SRR5341366 Sensitive lineage4 None
ERR4819217 Other lineage1.2.2.2 None
SRR5341461 Sensitive lineage4 None
ERR4819357 Other lineage4.9 None
SRR5341387 Other lineage4 None
ERR4819462 Other lineage4 None
ERR4820324 Other lineage4 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR5341425 Other lineage4 None
SRR5341455 Sensitive lineage4 None
SRR5341298 Sensitive lineage4 None
SRR5341300 Other lineage4 None
SRR5341308 Sensitive lineage4 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR5341299 Sensitive lineage4 None
SRR5341303 RR-TB lineage4 None
ERR4819933 Other lineage4.9 None
SRR5341456 Other None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341310 Other lineage1.1.2 None
ERR4820151 RR-TB lineage4.8 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
SRR5341467 Other lineage4 None
ERR1465946 Sensitive lineage4.8 ch
ERR11049335 Sensitive lineage4.8 None
SRR5341469 Other lineage4 None
ERR4821143 RR-TB lineage4.9 None
SRR6045664 Other lineage4.2.1 None
SRR6045503 HR-TB None
SRR23339977 Sensitive lineage4.8 None
ERR4821310 Other lineage5 None
SRR23340091 MDR-TB lineage4.8 None
SRR6045706 Sensitive lineage4 None
SRR6044835 Sensitive lineage4 None
SRR6045795 HR-TB lineage2.2.1 None
SRR6046611 HR-TB lineage4.9 None
SRR6045371 Sensitive lineage4.2.1 None
SRR6046299 HR-TB None
SRR6046385 Other lineage4.9 None
ERR2851356 Sensitive lineage4.9 None
SRR6046594 HR-TB lineage4 None
SRR6045384 Other lineage4.1.2 None
SRR6511621 HR-TB None
SRR6046897 Sensitive lineage4 None
SRR6046802 Other lineage4 None
ERR4818038 HR-TB lineage4.8 gb
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR4831657 MDR-TB lineage2.2.1 None
SRR6785510 Sensitive lineage4.8 None
ERR4831545 Pre-XDR-TB lineage2.2 None
ERR4831546 HR-TB lineage2.2 None
ERR4831618 MDR-TB lineage2.1 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
SRR6832472 Sensitive lineage4.8 None
ERR4817771 Sensitive lineage4.8 gb
ERR4818974 Sensitive lineage4.8 gb
SRR9970981 RR-TB lineage4.3.2.1 None
SRR9970979 Sensitive lineage4.8 None
SRR9970980 Other lineage4.1.2 None
SRR9971113 Other lineage2.2.1 None
SRR9971112 Other lineage2.2.1 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR1035122 Sensitive None
ERR323085 Sensitive lineage4 None
ERR4820329 Sensitive lineage4.8 gb
ERR323066 Sensitive lineage4 None
ERR1063855 Other lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR1063896 Sensitive None
ERR4820978 Sensitive lineage4.8 gb
ERR3283014 HR-TB None
ERR3283057 HR-TB lineage4 None
ERR3468488 RR-TB La1.8.1 None
ERR349264 Sensitive lineage4 None
ERR349265 Sensitive lineage4 None
ERR349298 Sensitive lineage4 None
ERR349296 Sensitive lineage4 None
ERR11044377 Sensitive lineage4.8 None
ERR137286 Sensitive lineage4 None
ERR3283028 Other None
ERR3283031 HR-TB None
ERR3283047 HR-TB None
ERR3445504 HR-TB None
ERR349266 Sensitive lineage4.9 None
ERR349299 Sensitive lineage4 None
ERR363421 Sensitive lineage4 None
ERR349330 Sensitive lineage4 None
ERR363437 Sensitive lineage4 None
ERR363426 Sensitive lineage4 None
ERR363446 Sensitive lineage4 None
ERR363445 Sensitive lineage4 None
ERR363490 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363456 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR363479 Sensitive lineage4 None
ERR363499 Sensitive lineage4 None
ERR363498 Sensitive lineage4 None
ERR369160 Sensitive lineage4.9 None
ERR363502 Sensitive lineage4 None
ERR363509 Sensitive lineage4 None
ERR369158 Sensitive lineage4 None
ERR363500 Sensitive lineage4 None
ERR363506 Sensitive lineage4 None
ERR369159 Sensitive lineage4 None
ERR3797048 HR-TB None
ERR369163 Sensitive lineage4 None
ERR373946 Sensitive lineage4 None
ERR369162 Sensitive lineage4 None
ERR373945 HR-TB lineage4 None
ERR373947 Sensitive lineage4 None
ERR3797087 Sensitive lineage4 None
ERR3797063 HR-TB None
ERR3797065 MDR-TB lineage4 None
ERR3797079 Sensitive lineage4 None
ERR3797064 Sensitive None
ERR4178226 Sensitive lineage4 None
ERR400345 Other lineage4 None
ERR400538 RR-TB lineage5.1.2 None
ERR4024991 Other None
ERR4178309 Other lineage4.1.2.1 None
ERR473323 HR-TB lineage4.9 None
ERR473303 Sensitive lineage4.9 None
ERR4769554 RR-TB lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR4769442 HR-TB lineage4 None
ERR4769444 HR-TB lineage4.9 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4797184 Sensitive lineage4 None
ERR4796254 Sensitive lineage4 None
ERR4796929 Sensitive lineage4 None
ERR2514709 Sensitive lineage4.8 gb
ERR4799378 Sensitive lineage4 None
ERR4797264 Sensitive None
ERR4798099 Other None
ERR4828884 Sensitive lineage4.8 None
ERR4797193 HR-TB lineage1.1.2 None
ERR4798431 HR-TB None
ERR6358951 HR-TB lineage4 None
ERR4799513 HR-TB lineage2.2 None
ERR4799547 Sensitive lineage2.2.1 None
ERR6359069 Other lineage4.9 None
ERR6359066 HR-TB lineage4 None
ERR6359070 Other lineage4.9 None
ERR6866022 Other None
ERR6359074 HR-TB lineage4.9 None
ERR6865502 Sensitive lineage4 None
ERR6865513 Other lineage4.1.2.1 None
ERR736837 Other lineage4.9 None
ERR736834 Sensitive lineage4 None
ERR6866639 Other None
ERR751326 Sensitive lineage4 None
ERR736856 HR-TB lineage4 None
ERR736872 Sensitive lineage4 None
ERR9786525 Other lineage4.8;lineage4.1 None
ERR7911670 Pre-XDR-TB lineage2.2 None
ERR9786076 Sensitive lineage3 None
ERR7821126 Sensitive lineage1.1.3.2 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR9896144 Other lineage3 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR9787256 Other lineage6.1.3 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR10315567 Other lineage2.2.1 None
SRR10809074 Sensitive lineage4 None
ERR990545 Other lineage3 None
SRR10315556 Sensitive lineage2.2.1 None
SRR1169306 Other None
SRR1158918 Sensitive lineage4 None
SRR11349186 MDR-TB lineage4.3.3 None
SRR1167384 Other lineage4 None
SRR1169249 Other La3 None
SRR1183965 Sensitive lineage4.9 None
SRR1183049 Other lineage2.2 None
SRR1173568 Other lineage4.9 None
SRR1173777 Other lineage4 None
SRR1180137 Other lineage2.2.1 None
SRR1180996 HR-TB lineage4 None
SRR1181020 Other lineage2.2.1 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR11972367 Sensitive lineage2.2.1 None
SRR12006550 Other lineage1.2.1.2 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR16156775 Other lineage4.9 None
SRR14781862 HR-TB lineage4.8 None
SRR16156804 RR-TB lineage4.9 None
SRR1791747 Other La1.8.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR18003023 Other lineage2.2.1 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SRR18003024 RR-TB lineage2.2.1 None
SRR19303820 RR-TB lineage4.8 None
SRR18003042 Other lineage2.2.1 None
SRR18003046 MDR-TB lineage2.2.1 None
SRR18714862 Sensitive lineage4.8 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
SRR8692879 HR-TB lineage4.9 None
SRR22424778 RR-TB lineage2.2.1.1 None
SRR22424787 Sensitive lineage4.9 None
SRR8692790 RR-TB lineage4 None
SRR8692800 Other lineage4 None
SRR8692863 Other lineage4;lineage2.2 None
SRR8692887 Other None
ERR176751 HR-TB None
SRR8692905 HR-TB None
SRR8692899 Other lineage4.9 None