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SRA data
Rv0005
- c.1920C>T
Drug resistance types
67 Sensitive
1 RR-TB
22 HR-TB
3 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
28 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
93
lineage4
3
lineage1.2.2.2
3
lineage4.8
2
lineage2.2.1
2
lineage4.8;lineage4.9
2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
2
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3
1
lineage2.1;lineage4.9;lineage6.3
1
lineage2.2.1.1
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
123
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1035122
Sensitive
lineage4.9
None
ERR1063896
Sensitive
None
ERR124636
Sensitive
lineage4.9
None
ERR13265833
Other
lineage4.9
None
ERR137286
Other
lineage4.9
None
ERR2026695
MDR-TB
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3
None
ERR2026696
MDR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3
None
ERR2026697
HR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
None
ERR2026698
HR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
None
ERR212138
HR-TB
lineage4.9
None
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