Rv3596c - c.798G>A
Drug resistance types
61 Sensitive
8 RR-TB
33 HR-TB
12 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
38 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 18 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.9 | 76 |
| lineage2.2.2 | 4 |
| lineage4.4.1.2 | 1 |
| lineage4.3.2.1 | 6 |
| La1;lineage4.1.2 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage4.8 | 1 |
| lineage4.1.1.3 | 3 |
| lineage3 | 4 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.2;lineage4.9 | 1 |
| lineage4.3.4 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage6.1.3 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage1.2.1.1 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4 | 3 |
| lineage4.1.1.2 | 1 |
| lineage4.1.2.1 | 5 |
| lineage1.1.3.1 | 1 |
| La1;lineage4.9 | 2 |
| lineage4.3.4.2 | 1 |
| lineage4.9;lineage7 | 3 |
| lineage4.4.1.1.1 | 1 |
| lineage4.4.2 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.1.2 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.5 | 1 |
| lineage4.3.3 | 3 |
| lineage1.1.2 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage2.2.1.2 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage1.2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 158 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR12708392 | Other | lineage2.2.1 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR1035122 | Sensitive | lineage4.9 | None | DRR185024 | Other | lineage2.2.2 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | ERR349264 | Sensitive | lineage4.9 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4797474 | Sensitive | lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | SRR6046385 | Sensitive | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | ERR363500 | Sensitive | lineage4.9 | None | SRR7535082 | Sensitive | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | ERR363479 | Sensitive | lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR3675260 | Sensitive | lineage4.9 | None | DRR184629 | Other | lineage2.2.1 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR363447 | Other | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | ERR2514292 | Sensitive | lineage3 | gb | ERR369162 | Other | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR4817998 | Other | lineage3 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | ERR369163 | Sensitive | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR3675292 | Sensitive | lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | ERR6866410 | Sensitive | lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR363490 | Sensitive | lineage4.9 | None | ERR176741 | Other | lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR4816548 | HR-TB | lineage4.5 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR349299 | Other | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | SRR7070546 | Sensitive | lineage3 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR1140724 | Other | lineage2.2.1 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | SRR6045503 | Sensitive | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR323066 | Sensitive | lineage4.9 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | ERR363453 | Sensitive | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR387051 | Other | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR10315466 | RR-TB | lineage2.2.1 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR18002963 | Other | lineage2.2.1 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR216965 | Sensitive | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None |
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