Rv0006 - c.1623C>T


Drug resistance types
58 Sensitive 3 RR-TB 28 HR-TB 9 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 40 Other
lineage Counts
lineage Count
lineage4.9 74
lineage1.1.2;lineage4.1.2.1;lineage4.1.3 1
lineage4.9.1 1
lineage4.9;lineage7 1
M.canetti;lineage4.9 3
lineage6.1.1 2
La1.7;M.canetti;lineage4.9 2
La3;lineage4.9 8
lineage1.1.1;lineage4 1
La1.7;lineage4.9 3
lineage4.6.3;lineage4.9 1
lineage1.2.2.1;lineage4.4.1.1 1
lineage4.1.2.1 5
lineage2.2.1 6
La3;lineage4 1
lineage4 4
lineage2.2.1;lineage4 1
La1.7;lineage4.9;lineage7 3
lineage4.9;lineage9 2
lineage3 3
La1.7.1;La1.7.X-unk4 1
La1.7;lineage3;lineage4.9;lineage7 1
lineage4.3.2;lineage4.9 1
lineage4.9;lineage6.3 1
lineage4.2.1.1;lineage4.3.3 1
lineage4.3.4 1
lineage1;lineage4.9 1
lineage5.1.2 1
1
La1;lineage4.9 1
lineage2.2.1.2;lineage7 1
lineage4.1.1.1 1
lineage4.1;lineage4.9 1
La1.7.1 1
lineage3.1.2.2 1
La2;lineage4.9;lineage9 1
La1.7.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 140
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR369160 Sensitive lineage4.9 None
ERR4816100 Sensitive lineage1.1.2;lineage4.1.2.1;lineage4.1.3 None
ERR11466062 Sensitive lineage4.9.1 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR363447 Other lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
ERR3799304 Other lineage6.1.1 None
ERR373947 Other lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
ERR373946 Sensitive lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR349296 Sensitive lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
ERR349264 Sensitive lineage4.9 None
ERR11465714 Other lineage1.2.2.1;lineage4.4.1.1 None
ERR349330 Sensitive lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR4818811 Pre-XDR-TB lineage2.2.1 None
ERR176651 Other lineage4.9 None
ERR369162 Other lineage4.9 None
ERR3283028 Other La3;lineage4 None
ERR369158 Other lineage4.9 None
SRR3675265 Other lineage4 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR6046210 Other lineage4.9 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR363421 Sensitive lineage4.9 None
ERR369161 Sensitive lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR349265 Other lineage4.9 None
ERR373945 Sensitive lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR6865502 Sensitive lineage4 None
ERR363449 Sensitive lineage4.9 None
ERR4798504 RR-TB lineage3 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR363445 Other lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR363502 Other lineage4.9 None
SRR3675441 Other lineage4.9 None
ERR473332 Other lineage4.9 None
ERR349266 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR181824 HR-TB lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR176778 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR6045503 Sensitive lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR1063858 HR-TB lineage4.9 None
ERR363500 Sensitive lineage4.9 None
SRR29096410 Other lineage4.9 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR5341373 Other lineage4.9 None
ERR363453 Sensitive lineage4.9 None
ERR9787014 Other lineage6.1.1 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR736817 HR-TB lineage4.3.4 None
SRR12142339 HR-TB lineage2.2.1 None
ERR369163 Sensitive lineage4.9 None
ERR363498 Sensitive lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
ERR9119669 HR-TB lineage4.9 None
SRR3675292 Sensitive lineage4.9 None
ERR363490 Sensitive lineage4.9 None
ERR349300 Sensitive lineage4.9 None
ERR363479 Sensitive lineage4.9 None
ERR216965 Sensitive lineage4.9 None
SRR6046492 Other lineage4.9 None
SRR3675577 Sensitive lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR6865513 Other lineage4.1.2.1 None
SRR7496471 Sensitive lineage4 None
SRR3675209 Sensitive lineage4.9 None
ERR349299 Other lineage4.9 None
ERR2514552 Sensitive lineage3 None
SRR29096399 Sensitive lineage2.2.1 None
SRR29096150 Other lineage4.9 None
ERR400336 Sensitive lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
ERR400538 RR-TB lineage5.1.2 None
ERR212125 HR-TB lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR987722 MDR-TB None
ERR369159 Sensitive lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR363446 Sensitive lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
SRR29097026 Other lineage4.9 None
ERR4816113 Sensitive lineage4.1.1.1 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR4817998 Other lineage3 None
ERR369151 Other lineage4.9 None
SRR6045191 Sensitive lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
ERR3797048 Other La3;lineage4.9 None
ERR4178309 Other lineage4.1.2.1 None
ERR363506 Sensitive lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
ERR181887 Other lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
SRR6046897 Sensitive lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR363474 Sensitive lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR3283011 Other La3;lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR363499 Sensitive lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None