Rv0667 - c.1344A>T
Drug resistance types
82 Sensitive
24 RR-TB
62 HR-TB
12 MDR-TB
3 Pre-XDR-TB
2 XDR-TB
96 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.1 | 1 |
| lineage4.9 | 158 |
| lineage1.2.1.1 | 2 |
| lineage4.3.3 | 3 |
| lineage4.8;lineage4.9 | 2 |
| lineage4.4.1.1.1 | 1 |
| lineage4 | 5 |
| lineage2.2.1;lineage4 | 2 |
| La1.8.1 | 3 |
| lineage3 | 3 |
| La1.7;lineage4.9;lineage7 | 3 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.1.1.3 | 4 |
| lineage4.4.1.1 | 4 |
| M.canetti;lineage4.9 | 3 |
| La1.7;lineage4.9 | 5 |
| lineage4.5 | 2 |
| lineage2.2.2 | 1 |
| lineage1.2.2.2 | 1 |
| La1.7;M.canetti;lineage4.9 | 4 |
| lineage4.2.1 | 3 |
| lineage2.2.1 | 17 |
| lineage1.1.3.2 | 1 |
| lineage3.1.1 | 3 |
| lineage4.9;lineage7 | 1 |
| La1.7 | 2 |
| lineage4.6.2.2 | 2 |
| lineage4.9.1 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage4.1;lineage4.9 | 2 |
| lineage1.1.1;lineage4 | 1 |
| M.canetti;lineage2.2 | 2 |
| 3 | |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.3.2.1 | 4 |
| lineage4.3.4.2.1 | 2 |
| La1.7.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.8 | 2 |
| lineage4.2.2.2 | 1 |
| lineage4.8.1 | 2 |
| lineage4.1.3 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage5.1.2 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.1.2.1 | 4 |
| La1.2.BCG | 1 |
| lineage5.1.4 | 1 |
| lineage1.1.2 | 1 |
| lineage4.3.1 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage2.2.1;lineage4.4.2 | 1 |
| lineage1.1.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 281 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4816113 | Sensitive | lineage4.1.1.1 | None | SRR3675441 | RR-TB | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR373945 | Other | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR4024991 | HR-TB | lineage4.8;lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR369158 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR11462861 | Other | La1.8.1 | None | ERR2513259 | Other | lineage3 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR5341313 | Other | La1.7;lineage4.9;lineage7 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR373946 | Other | lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR5341308 | HR-TB | lineage4.9 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | ERR4811031 | Other | lineage4.5 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR4811030 | Other | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR3675235 | HR-TB | lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR926159 | Sensitive | lineage4.9 | None | SRR6045706 | Other | lineage4.9 | None | ERR4796254 | Other | lineage4.9 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR5341432 | Other | La1.7;lineage4.9;lineage7 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR12708384 | Sensitive | lineage4.9 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | SRR3675387 | Other | lineage4.9 | None | ERR363490 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR7821126 | Other | lineage1.1.3.2 | None | SRR12708372 | Sensitive | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | SRR3675246 | Other | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR4797184 | HR-TB | lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR3675222 | Other | La1.7 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | ERR502510 | HR-TB | lineage4.9 | None | ERR363500 | Other | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | ERR736834 | HR-TB | lineage4.9 | None | ERR6866022 | HR-TB | lineage4.8;lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR6045503 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR369159 | Other | lineage4.9 | None | ERR971389 | Other | lineage4.9 | None | ERR1063896 | HR-TB | None | ERR11252736 | Other | lineage4.9 | None | ERR212001 | HR-TB | None | SRR12708416 | Sensitive | None | ERR752229 | Other | lineage4.5 | None | ERR4797474 | Other | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR363449 | Other | lineage4.9 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR4798099 | HR-TB | lineage4.9 | None | ERR363499 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR1791747 | Other | La1.8.1 | None | ERR6866639 | HR-TB | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR926156 | Other | lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR4769508 | RR-TB | lineage4.9 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR6865502 | Sensitive | lineage4 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR323066 | HR-TB | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | SRR3675580 | Sensitive | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR3675477 | Sensitive | lineage4.9 | None | ERR349264 | Other | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | SRR3675585 | HR-TB | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR3797073 | Other | La1.8.1 | None | ERR4830353 | HR-TB | La1.7 | None | ERR4178226 | Sensitive | lineage4 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | ERR363447 | Other | lineage4.9 | None | SRR1158918 | Other | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR369156 | Sensitive | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR4798431 | Other | lineage4.1;lineage4.9 | None | ERR400538 | RR-TB | lineage5.1.2 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR7821163 | Other | lineage2.2.1 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR6865513 | Other | lineage4.1.2.1 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR926155 | Other | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | ERR363479 | Other | lineage4.9 | None | SRR1915487 | Other | La1.2.BCG | None | ERR2513283 | Sensitive | lineage5.1.4 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR363446 | Other | lineage4.9 | None | SRR10315558 | RR-TB | lineage2.2.1 | None | ERR369162 | Other | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR4817998 | Other | lineage3 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1181403 | Other | lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR1180345 | Other | lineage4.9 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR363421 | Other | lineage4.9 | None | ERR702405 | HR-TB | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR926165 | Other | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR736848 | Other | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR926157 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR369163 | Other | lineage4.9 | None | SRR26399239 | Sensitive | lineage4.9 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR4821655 | HR-TB | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | ERR124636 | HR-TB | lineage4.9 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR1175508 | Sensitive | lineage4.9 | None | ERR926160 | Other | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR349299 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6511621 | HR-TB | lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR1035122 | HR-TB | lineage4.9 | None | ERR323062 | HR-TB | lineage4.9 | None | ERR363498 | Other | lineage4.9 | None | SRR6046210 | Other | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR5341453 | Other | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR19295647 | HR-TB | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | ERR363453 | Other | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR349266 | Other | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR502511 | HR-TB | lineage4.9 | None | ERR4831841 | HR-TB | lineage2.2.1;lineage4.4.2 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | ERR11252664 | Other | lineage2.2.1 | None | ERR349300 | Other | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None |
|---|
