Rv0668 - c.1018T>C


Drug resistance types
154 Sensitive 59 RR-TB 84 HR-TB 42 MDR-TB 12 Pre-XDR-TB 2 XDR-TB 107 Other
lineage Counts
lineage Count
lineage4 114
lineage4.8 11
lineage4.9 138
57
lineage6.2.3;lineage1.1.2 1
La1.7.X-unk4 1
La1.8.1 4
lineage4.1.2.1 12
lineage4.6.2.2 3
lineage5.1.2 1
lineage4;lineage3.1 1
lineage3 7
La1.2 3
La1.3 1
lineage4.9;La1.3 1
lineage2.2.1 25
lineage1.1.2 3
lineage4.5 2
lineage4.5;lineage2.2.1 1
lineage1.1.3.1 1
lineage4.6.5 2
lineage4.1.1.3 3
lineage6 2
lineage4.3.3 6
lineage6.1.3 1
lineage4.7 1
lineage4.6.1.2 5
lineage4.8;lineage4.3.3 4
lineage4.4.1.1.1 1
lineage2.2.1.1 5
lineage1.1.1 2
lineage1.2.1.2 1
lineage4.3.4.1 2
La1.4 1
lineage4.2.1 3
La1.7.1 2
lineage2.2 4
lineage3.1.3 2
lineage4.4.2 1
lineage4.1 2
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage4.3.4 1
lineage4.3.4.2.1 5
lineage1.2.1.1 1
lineage2.1 3
lineage3.1.2.1 2
lineage1.1 1
lineage4;lineage2 1
lineage4.1.1.2 1
lineage5.1.4 1
lineage4.1.1.3.1 1
lineage4.9;lineage4.2.1 1
lineage4.9;lineage2.1 1
lineage4.1.2 2
lineage2.2.2 1
spoligotype Counts
spoligotype Count
None 460
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR323115 Sensitive lineage4 None
ERR12015084 Other lineage4.8 None
ERR3273109 MDR-TB lineage4 None
ERR3439265 Other lineage4.9 None
ERR3283025 HR-TB None
ERR3283049 Sensitive lineage4.9 None
ERR3324368 RR-TB lineage6.2.3;lineage1.1.2 None
ERR3283033 Sensitive lineage4.9 None
ERR3283046 MDR-TB lineage4.9 None
ERR3439432 Other None
ERR363421 Sensitive lineage4 None
ERR349264 Sensitive lineage4 None
ERR349299 Sensitive lineage4 None
ERR3445487 Other La1.7.X-unk4 None
ERR349265 Sensitive lineage4 None
ERR349266 Sensitive lineage4.9 None
ERR349298 Sensitive lineage4 None
ERR349296 Sensitive lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR349330 Sensitive lineage4 None
ERR363437 Sensitive lineage4 None
ERR363426 Sensitive lineage4 None
ERR363446 Sensitive lineage4 None
ERR363456 Sensitive lineage4 None
ERR363445 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR363479 Sensitive lineage4 None
ERR363498 Sensitive lineage4 None
ERR363499 Sensitive lineage4 None
ERR363500 Sensitive lineage4 None
ERR363490 Sensitive lineage4 None
ERR369157 Sensitive lineage4.9 None
ERR363506 Sensitive lineage4 None
ERR369156 Sensitive lineage4.9 None
ERR363502 Sensitive lineage4 None
ERR363509 Sensitive lineage4 None
ERR369151 Sensitive lineage4.9 None
ERR369159 Sensitive lineage4 None
ERR369158 Sensitive lineage4 None
ERR369162 Sensitive lineage4 None
ERR369160 Sensitive lineage4.9 None
ERR373947 Sensitive lineage4 None
ERR373945 HR-TB lineage4 None
ERR373946 Sensitive lineage4 None
ERR369163 Sensitive lineage4 None
ERR3797086 Other lineage4.9 None
ERR3797036 HR-TB None
ERR3797060 Other La1.8.1 None
ERR3797073 HR-TB La1.8.1 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR400320 Sensitive lineage4 None
ERR400326 Sensitive lineage4 None
ERR400345 Other lineage4 None
ERR400350 Sensitive lineage4.9 None
ERR405191 Other lineage4.9 None
ERR400538 RR-TB lineage5.1.2 None
ERR4024991 Other None
ERR403298 HR-TB lineage4 None
ERR405209 Sensitive lineage4 None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR4188213 HR-TB La1.8.1 None
ERR4178226 Sensitive lineage4 None
ERR4178309 Other lineage4.1.2.1 None
ERR4188247 HR-TB None
ERR4596902 HR-TB lineage3 None
ERR473323 HR-TB lineage4.9 None
ERR473303 Sensitive lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR4769427 Other La1.2 None
ERR4769442 HR-TB lineage4 None
ERR4769474 HR-TB lineage4 None
ERR4769444 HR-TB lineage4.9 None
ERR4769521 HR-TB None
ERR4769516 Other La1.3 None
ERR4769508 RR-TB lineage4.9 None
ERR4769530 RR-TB lineage4.9 None
ERR4796254 Sensitive lineage4 None
ERR4769550 Other lineage4.9;La1.3 None
ERR4797264 Sensitive None
ERR4796472 Pre-XDR-TB lineage2.2.1 None
ERR4796577 MDR-TB None
ERR4797193 HR-TB lineage1.1.2 None
ERR4796351 MDR-TB lineage4.9 None
ERR4796929 Sensitive lineage4 None
ERR4797184 Sensitive lineage4 None
ERR4798099 Other None
ERR4797474 Other None
ERR4797313 HR-TB None
ERR4797350 Sensitive lineage4.9 None
ERR4798406 HR-TB None
ERR4798431 HR-TB None
ERR4811031 Sensitive lineage4.5 None
ERR4799378 Sensitive lineage4 None
ERR4798823 HR-TB lineage4 None
ERR4811030 Sensitive None
ERR4811035 Pre-XDR-TB lineage4.5;lineage2.2.1 None
ERR4812155 Sensitive None
ERR6198317 Other La1.2 None
ERR6865502 Sensitive lineage4 None
ERR6359045 HR-TB None
ERR6359074 HR-TB lineage4.9 None
ERR6358951 HR-TB lineage4 None
ERR6358979 Other None
ERR6359066 HR-TB lineage4 None
ERR6359070 Other lineage4.9 None
ERR6359069 Other lineage4.9 None
ERR736837 Other lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR736831 HR-TB lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
ERR6866022 Other None
ERR6866410 Sensitive None
ERR6866547 Sensitive lineage4 None
ERR6866639 Other None
ERR6866807 HR-TB lineage4 None
ERR702404 HR-TB None
ERR736834 Sensitive lineage4 None
ERR736848 HR-TB None
ERR736835 HR-TB None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR736872 Sensitive lineage4 None
ERR773806 Sensitive lineage2.2.1 None
ERR7801175 RR-TB lineage4.6.5 None
ERR751326 Sensitive lineage4 None
ERR7801176 RR-TB lineage4.6.5 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR9786076 Sensitive lineage3 None
ERR9786164 RR-TB lineage4.1.1.3 None
ERR970449 RR-TB lineage4.1.1.3 None
ERR9786444 Sensitive lineage4.8 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR9787030 Sensitive lineage6 None
ERR9992879 XDR-TB lineage4.3.3 None
ERR9787256 Other lineage6.1.3 None
ERR987707 MDR-TB lineage4.7 None
ERR9896144 Other lineage3 None
ERR9787336 Other lineage6 None
SRR1049581 MDR-TB lineage4.6.1.2 None
SRR10315751 MDR-TB lineage4.8 None
SRR1049677 MDR-TB lineage4.8;lineage4.3.3 None
SRR1049676 MDR-TB lineage4.8;lineage4.3.3 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR10808399 Sensitive lineage4 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR1062920 MDR-TB lineage4.8;lineage4.3.3 None
SRR10809074 Sensitive lineage4 None
SRR10808668 Sensitive lineage2.2.1 None
SRR10808805 Sensitive None
SRR1172807 Sensitive lineage4.9 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR1141261 MDR-TB lineage4.9 None
SRR1140574 MDR-TB lineage4.8;lineage4.3.3 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1158918 Sensitive lineage4 None
SRR1166872 MDR-TB lineage4.3.3 None
SRR1172885 HR-TB lineage4.9 None
SRR1173185 HR-TB lineage4.9 None
SRR1173385 Sensitive lineage4.9 None
SRR1173450 RR-TB lineage4.9 None
SRR1173568 Other lineage4.9 None
SRR1173515 HR-TB lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
SRR1173777 Other lineage4 None
SRR1175474 HR-TB lineage4.9 None
SRR1175473 Other lineage4.9 None
SRR1175472 MDR-TB lineage4 None
SRR1175491 MDR-TB lineage4 None
SRR1175500 MDR-TB lineage4 None
SRR1175496 HR-TB lineage4.9 None
SRR1175508 Other lineage4.9 None
SRR1175507 MDR-TB lineage4 None
SRR1181091 Other lineage2.2.1.1 None
SRR1180147 Other lineage2.2.1.1 None
SRR1180172 Other lineage2.2.1 None
SRR1180270 Other lineage2.2.1 None
SRR1180996 HR-TB lineage4 None
SRR1183144 Other lineage2.2.1 None
SRR1181251 Other lineage2.2.1 None
SRR1183106 Other lineage2.2.1.1 None
SRR1183145 Other lineage2.2.1 None
SRR1184329 MDR-TB lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
SRR1184024 Other lineage2.2.1.1 None
SRR1184308 Sensitive lineage4.9 None
SRR1196478 MDR-TB lineage4.9 None
SRR11972438 HR-TB lineage1.1.1 None
SRR1196545 HR-TB lineage4.9 None
SRR13837647 Other lineage4.9 None
SRR12006550 Other lineage1.2.1.2 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR13861218 RR-TB lineage4.9 None
SRR13861140 MDR-TB lineage4.9 None
SRR13861149 RR-TB lineage4.9 None
SRR13861197 RR-TB lineage4.9 None
SRR13861138 RR-TB lineage4.9 None
SRR13861152 Sensitive lineage4.9 None
SRR13861276 RR-TB lineage4.9 None
SRR13861216 RR-TB lineage4.9 None
SRR13861245 RR-TB lineage4.9 None
SRR13861267 Other lineage4.9 None
SRR13861222 RR-TB lineage4.9 None
SRR13861277 RR-TB lineage4.9 None
SRR13861292 RR-TB lineage4.9 None
SRR13861337 RR-TB lineage4.9 None
SRR13861310 RR-TB lineage4.9 None
SRR13861320 RR-TB lineage4.9 None
SRR13861316 RR-TB lineage4.9 None
SRR13861385 Sensitive lineage4.9 None
SRR13861338 Sensitive lineage4.9 None
SRR13861341 RR-TB lineage4.9 None
SRR13861386 HR-TB lineage4.9 None
SRR13861393 Sensitive lineage4.9 None
SRR13861408 MDR-TB lineage4.9 None
SRR13861520 RR-TB lineage4.9 None
SRR13861451 RR-TB lineage4.9 None
SRR13861484 RR-TB lineage4.9 None
SRR13861501 RR-TB lineage4.9 None
SRR13861500 RR-TB lineage4.9 None
SRR13861443 RR-TB lineage4.9 None
SRR13861486 Other lineage4.9 None
SRR13861488 RR-TB lineage4.9 None
SRR13861503 Other lineage4.9 None
SRR13861519 Other lineage4.9 None
SRR13861543 RR-TB lineage4.9 None
SRR13861549 RR-TB lineage4.9 None
SRR13861547 RR-TB lineage4.9 None
SRR13861563 RR-TB lineage4.9 None
SRR13861561 RR-TB lineage4.9 None
SRR13861571 RR-TB lineage4.9 None
SRR13861590 RR-TB lineage4.9 None
SRR13861603 RR-TB lineage4.9 None
SRR13861618 RR-TB lineage4.9 None
SRR13861662 RR-TB lineage4.9 None
SRR13861629 RR-TB lineage4.9 None
SRR13861736 RR-TB lineage4.9 None
SRR13861663 Sensitive lineage4.9 None
SRR13861686 RR-TB lineage4.9 None
SRR13861722 RR-TB lineage4.9 None
SRR14334194 Pre-XDR-TB lineage2.2.1 None
SRR13861737 RR-TB lineage4.9 None
SRR14801720 RR-TB lineage4.8 None
SRR14801749 Sensitive None
SRR1791747 Other La1.8.1 None
SRR16156804 RR-TB lineage4.9 None
SRR16157123 Other lineage4.9 None
SRR16278274 Other La1.4 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR16156188 HR-TB lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR18910194 HR-TB lineage2.2 None
SRR18511647 Sensitive lineage2.2.1 None
SRR19295647 Sensitive lineage4.9 None
SRR18913742 Sensitive lineage3.1.3 None
SRR21469201 Other La1.7.1 None
SRR20969542 Other lineage4.4.2 None
SRR22424765 MDR-TB lineage4 None
SRR3675455 Sensitive lineage4 None
SRR22424787 Sensitive lineage4.9 None
SRR12708416 Sensitive lineage4.1 None
SRR8692887 Other None
SRR23961549 Other La1.2 None
ERR550636 MDR-TB lineage4.1.1.3 None
SRR3675473 Sensitive lineage4.9 None
SRR3675477 Other lineage4.9 None
ERR158583 HR-TB None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
SRR3601585 Pre-XDR-TB lineage2.2 None
SAMN02585910 Other lineage2.2.1 None
ERR161039 Sensitive lineage4.3.4 None
SRR3675502 Other None
SRR3675209 Sensitive lineage4.9 None
ERR181744 HR-TB None
SRR3619764 Pre-XDR-TB lineage2.2 None
ERR4814639 HR-TB lineage4 None
SRR3675229 Other lineage4 None
SRR3675210 Sensitive lineage4.9 None
ERR4815471 Other lineage4.9 None
ERR3275450 Other lineage4 None
ERR176518 Sensitive lineage4.3.4.2.1 None
SRR3675246 Sensitive lineage4 None
ERR4814734 Other lineage1.2.1.1 None
ERR702405 Sensitive lineage2.1 None
ERR1750907 RR-TB None
SRR3675247 Other lineage4.9 None
SRR3675318 Other lineage4.9 None
SRR3675265 Other lineage4 None
ERR176580 Sensitive lineage4.3.4.2.1 None
SRR3675279 Other None
SRR3675292 Sensitive lineage4 None
SRR3675387 Sensitive None
ERR4815022 Other lineage3.1.2.1 None
SRR3675514 Sensitive lineage4.9 None
ERR4816964 Other lineage4.9 None
SRR3675547 Other lineage4.9 None
SRR3675522 Other None
SRR3675553 Sensitive lineage4.9 None
ERR4816127 Sensitive lineage1.1 None
SRR3675548 Sensitive lineage4.9 None
SRR3675550 Other None
SRR5341422 HR-TB lineage2.1 None
ERR212123 Other None
ERR4816417 Other lineage4.9 None
ERR216965 HR-TB lineage4.9 None
SRR3675571 HR-TB None
ERR2229197 Sensitive lineage4 None
ERR4816548 MDR-TB lineage4.5 None
ERR2229198 MDR-TB lineage4.8 None
SRR5341384 Sensitive lineage4.9 None
ERR4816717 RR-TB lineage3.1.2.1 None
ERR4817204 RR-TB lineage4.9 None
SRR3742667 Sensitive lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR4816762 Other lineage4;lineage2 None
ERR4816849 HR-TB lineage4.1.2.1 None
ERR4818710 Sensitive lineage4.9 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR4815815 Sensitive lineage4 None
ERR4817667 HR-TB lineage4.8 None
ERR4817915 RR-TB lineage4.9 None
ERR4818252 Other lineage4.1.1.2 None
ERR4817998 Other lineage3 None
ERR2513121 Sensitive lineage3.1.3 None
ERR4818086 Sensitive lineage4.8 None
ERR4818811 Pre-XDR-TB lineage2.2.1 None
ERR1035162 Other None
ERR4818536 Other lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR4818561 HR-TB lineage4 None
ERR2512770 Other lineage4.2.1 None
ERR2513283 Other lineage5.1.4 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
SRR5341453 Sensitive None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR4818624 Other lineage4.3.4.2.1 None
SRR5153091 HR-TB lineage4.3.3 None
SRR5341373 HR-TB lineage4 None
ERR4819198 Other lineage2.2.1 None
ERR4819314 Other lineage1.1.1 None
SRR5341387 Other lineage4 None
SRR5341396 Other lineage4 None
SRR5341400 HR-TB lineage4 None
ERR4819546 HR-TB lineage3 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR5341425 Other lineage4 None
SRR5341418 Other None
ERR4819462 Other lineage4 None
ERR2514327 HR-TB lineage4.8 None
ERR4820394 Other lineage4.3.4.2.1 None
SRR5341296 Sensitive lineage4.9 None
SRR5341432 HR-TB lineage4 None
SRR5341455 Sensitive lineage4 None
SRR5341293 HR-TB lineage4 None
SRR5341437 Sensitive lineage4.9 None
SRR5341299 Sensitive lineage4 None
SRR5341300 Other lineage4 None
SRR5341298 Sensitive lineage4 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR5341308 Sensitive lineage4 None
SRR5341303 RR-TB lineage4 None
ERR4819933 Other lineage4.9 None
SRR5341323 Sensitive lineage4 None
SRR5341313 HR-TB None
ERR2446382 Other lineage4 None
SRR5341315 Sensitive None
SRR5341310 Other lineage1.1.2 None
ERR4820043 Sensitive lineage4.1.2.1 None
SRR5341467 Other lineage4 None
SRR5341345 Sensitive lineage4.9 None
SRR5341461 Sensitive lineage4 None
SRR5341366 Sensitive lineage4 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
ERR4821747 MDR-TB lineage4.9;lineage4.2.1 None
SRR5341469 Other lineage4 None
ERR4821811 RR-TB lineage4.9 None
ERR4821143 RR-TB lineage4.9 None
SRR6045503 HR-TB None
ERR4821655 Sensitive lineage4 None
ERR2517475 Other lineage4 None
ERR502511 Sensitive lineage4.9;lineage2.1 None
ERR4821254 Sensitive lineage4.9 None
ERR4821276 Other lineage3 None
ERR4821686 Sensitive lineage4.1.2.1 None
ERR4821704 MDR-TB lineage4.3.3 None
SRR6045706 Sensitive lineage4 None
SRR6045555 HR-TB None
SRR6046141 Other lineage4.9 None
SRR6046133 HR-TB None
SRR6045371 Sensitive lineage4.2.1 None
SRR6045832 HR-TB lineage4.9 None
SRR6045892 Sensitive None
SRR6044819 Sensitive lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR6046259 Sensitive lineage4.9 None
SRR6046385 Other lineage4.9 None
SRR6046362 HR-TB None
ERR2851356 Sensitive lineage4.9 None
SRR6046397 Other None
ERR4829530 Pre-XDR-TB lineage4.8 None
SRR6046802 Other lineage4 None
SRR6046460 HR-TB None
SRR6046594 HR-TB lineage4 None
SRR6046824 HR-TB None
SRR6046863 Sensitive lineage1.1.2 None
ERR485006 HR-TB lineage4.9 None
SRR6046897 Sensitive lineage4 None
ERR323037 HR-TB lineage4 None
SRR6511621 HR-TB None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4831618 MDR-TB lineage2.1 None
ERR4831620 MDR-TB lineage2.2.1 None
SRR6832644 Other lineage4.3.3 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR4872269 XDR-TB lineage2.2.1 None
SRR6832249 Other lineage2.2.1 None
SRR6789624 MDR-TB lineage4.1 None
ERR4831657 MDR-TB lineage2.2.1 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
SRR6981961 Sensitive lineage2.2.1 None
ERR11465353 Sensitive lineage4.3.4.1 None
SRR6832787 RR-TB lineage2.2.1 None
ERR294266 HR-TB None
ERR4817628 Sensitive lineage4.8 gb
ERR502889 Other None
ERR502510 Sensitive lineage4 None
ERR323048 Pre-XDR-TB lineage4.9 None
SRR9970980 Other lineage4.1.2 None
SRR7535082 Sensitive lineage4 None
SRR9970979 Sensitive lineage4.8 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR9971080 RR-TB lineage2.2.1 None
SRR9970978 Sensitive lineage4.1.2 None
ERR036207 Other lineage4.9 None
ERR323066 Sensitive lineage4 None
DRR213597 MDR-TB lineage2.2.2 None
ERR323108 HR-TB lineage4 None
ERR323085 Sensitive lineage4 None
ERR067699 HR-TB lineage4 None
ERR323107 Other lineage4 None
ERR067681 HR-TB None
ERR1063883 Sensitive lineage4 None
ERR1035122 Sensitive None
ERR1063855 Other lineage4 None
ERR067712 HR-TB lineage4 None
ERR1023525 HR-TB lineage4 None
ERR1063839 HR-TB lineage2.2 None
ERR1063857 HR-TB None
ERR1063896 Sensitive None
ERR137286 Sensitive lineage4 None
ERR133825 Sensitive lineage4 None
ERR10796569 Other lineage4.9 None
ERR133986 HR-TB None