Rv3596c - c.1440C>T


Drug resistance types
82 Sensitive 0 RR-TB 20 HR-TB 6 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 38 Other
lineage Counts
lineage Count
lineage4.9 86
lineage5.1.4 1
lineage2.2.1 7
lineage4.9;lineage7 1
lineage4.9;lineage6.1.3 1
lineage4.3.2.1 2
lineage3 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.2.1.1;lineage4.3.3 1
lineage4.3.3 1
M.canetti;lineage4.9;lineage9 1
La1.7;lineage4.9 3
La3;M.canetti;lineage4.9 1
lineage4.8 2
lineage4.4.1.1 1
lineage4 4
lineage4.1.1.2 1
lineage4.1.1.3 1
lineage4.1.2.1 5
La1;lineage4.9 2
lineage4.5 2
lineage1.1.1;lineage4 1
lineage1;lineage4.9 1
lineage2.2.1.2;lineage7 1
lineage4.1;lineage4.9 1
lineage4.3.1;lineage4.9;lineage6 1
La1;lineage2;lineage4.9 1
lineage1.1.3.1 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage2.2 1
La3;lineage2.1;lineage4.9;lineage6.3 1
1
lineage4.1.1.3;lineage4.9 1
La1.6;lineage4 1
La1.7;M.canetti;lineage4.9 1
lineage2.2.1;lineage4 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
M.canetti;lineage1 1
lineage2.2.1.1 1
La1.7.1;La1.7.X-unk4;lineage7 1
La1;lineage4.1.2 1
spoligotype Counts
spoligotype Count
None 146
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR373946 Sensitive lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
SRR5341456 Other lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
ERR3445502 Sensitive lineage4.9;lineage7 None
SRR6045217 Sensitive lineage4.9 None
ERR363500 Sensitive lineage4.9 None
SRR7535082 Sensitive lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR2513724 Sensitive lineage4.3.2.1 None
SRR10808668 Sensitive lineage2.2.1 None
ERR4817998 Other lineage3 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR12708409 HR-TB lineage4.3.3 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR400320 Sensitive lineage4.9 None
SRR3675522 Other lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR26112147 Sensitive lineage4.8 None
SRR6045548 Sensitive lineage4.9 None
ERR4799547 HR-TB lineage2.2.1 None
ERR363421 Sensitive lineage4.9 None
ERR373945 Sensitive lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR363426 Sensitive lineage4.9 None
SRR5341330 Other lineage4.9 None
ERR400345 Other lineage4.9 None
SRR6046897 Sensitive lineage4.9 None
ERR363474 Sensitive lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR4818252 Sensitive lineage4.1.1.2 None
SRR6046245 Other lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR363499 Sensitive lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR108471 HR-TB lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR363502 Other lineage4.9 None
SRR3675247 Other lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
ERR373947 Other lineage4.9 None
ERR12328162 Other lineage4.5 None
ERR349266 Sensitive lineage4.9 None
ERR736834 Sensitive lineage4.9 None
ERR779852 Sensitive lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR4796929 Sensitive lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR349296 Sensitive lineage4.9 None
SRR10808730 Other lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR369162 Other lineage4.9 None
ERR363453 Sensitive lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
SRR6044875 Sensitive lineage4.9 None
ERR369163 Sensitive lineage4.9 None
ERR369158 Other lineage4.9 None
ERR502511 Sensitive lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR4178309 Other lineage4.1.2.1 None
ERR702405 Sensitive lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR323107 Sensitive lineage4.9 None
ERR363479 Sensitive lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
ERR349265 Other lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
SRR10808399 Sensitive lineage4.9 None
ERR349299 Other lineage4.9 None
ERR400326 Other lineage4.9 None
SRR6045371 Other lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR6045050 Sensitive lineage4.3.2.1 None
ERR3797046 HR-TB lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR12708416 Sensitive None
SRR2010299 MDR-TB lineage2.2.1 None
ERR369159 Sensitive lineage4.9 None
ERR349264 Sensitive lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR349330 Sensitive lineage4.9 None
ERR363446 Sensitive lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR3675477 Sensitive lineage4.9 None
SRR28351554 Sensitive La1.6;lineage4 None
ERR2693252 Sensitive lineage4.9 None
SRR6045503 Sensitive lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
SRR12142339 HR-TB lineage2.2.1 None
ERR363498 Sensitive lineage4.9 None
SRR3675580 Sensitive lineage4.9 None
SRR3675265 Other lineage4 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR3675292 Sensitive lineage4.9 None
ERR6866410 Sensitive lineage4.9 None
ERR363506 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
ERR349300 Sensitive lineage4.9 None
ERR4799025 Other lineage4.8 None
SRR3675267 Other La1.7;lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR502510 Sensitive lineage4.9 None
SRR16156817 Other lineage4.9 None
ERR6865502 Sensitive lineage4 None
SRR11662694 Other lineage4.9 None
ERR363449 Sensitive lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
SRR15014655 Other M.canetti;lineage1 None
SRR10808805 Other La1;lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR5341323 Sensitive lineage4.9 None
ERR400336 Sensitive lineage4.9 None
ERR3273109 HR-TB lineage4 None
SRR3675260 Sensitive lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR10808490 Sensitive lineage2.2.1.1 None
SRR3675387 Other lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR9970978 Sensitive La1;lineage4.1.2 None