Rv0668 - c.1209C>G


Drug resistance types
62 Sensitive 34 RR-TB 56 HR-TB 51 MDR-TB 15 Pre-XDR-TB 0 XDR-TB 134 Other
lineage Counts
lineage Count
lineage4.9 120
lineage4.3.4.2.1 7
La3;lineage4.9 9
lineage2.2.2 5
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.7 1
lineage2.2.1;lineage4.5 1
lineage4.2.1 4
M.canetti 10
lineage2.2 2
lineage4.9;lineage7 1
La2;lineage4.9;lineage9 1
lineage3 15
lineage4.1.1.1 5
La3;M.canetti 9
lineage4.3.1 1
lineage4.3.2.1 6
lineage1.1.2 2
lineage2.2.1 33
M.canetti;lineage4.9 3
lineage2.2.1.1 5
lineage4.4.1.1.1 1
lineage4.8 7
lineage1.1.1.1 1
La1.2.BCG 3
lineage6.1.2 1
La1.7;lineage4.9 3
lineage4.6.3;lineage4.9 1
4
lineage3.1.2.1 3
lineage1.2.1.1 1
lineage4.1.2 3
lineage4.6.5 2
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La1.7;lineage4.9;lineage7 3
lineage4.3.4.1 3
lineage4.6.1.1 1
lineage4 4
lineage4.1.2.1 7
La1.7;M.canetti;lineage4.9 3
La1.7.1;La1.7.X-unk4 1
lineage4.9;lineage9 2
lineage4.1.2.1;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.3.2;lineage4.9 1
lineage3;lineage4 2
lineage1.1.2;lineage4.1.2.1;lineage4.1.3 1
lineage4.6.2.2 3
lineage4.3.3 6
lineage4.2;lineage4.9 1
lineage1.2.2.2 2
lineage4.1.1.3 2
La1.7;lineage3;lineage4.9;lineage7 1
La1.7;lineage4.2 1
lineage4.1.2.1;lineage4.4.1 1
lineage4.8.1 1
La1.6 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.3.4 1
La2;lineage2.2 1
lineage3;lineage4.9 1
lineage4.2.2.2 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La2;lineage4.9 2
lineage3.1.2.1;lineage3.1.2.2 1
lineage4.4 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.3.4.2 2
lineage1;lineage4.9 1
lineage3.1.2.2 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.9;lineage6.3 1
La1.3 1
La1.7.1;lineage4.9 1
lineage4.1.1.3.1;lineage4.9 1
lineage4.1.2.1;lineage4.4.1.1 1
lineage1.1.1 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.1;lineage4.9 1
La3;lineage4 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage6.1.1 2
La2;M.canetti 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.1.3 1
spoligotype Counts
spoligotype Count
None 352
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR176778 HR-TB lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
ERR3797063 Other La3;lineage4.9 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR7645928 Other lineage4.7 None
ERR1063849 HR-TB lineage4.9 None
ERR4811035 Pre-XDR-TB lineage2.2.1;lineage4.5 None
SRR7755649 MDR-TB lineage4.2.1 None
ERR3797043 Sensitive lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR551182 Sensitive M.canetti None
ERR363498 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR1140716 Other lineage3 None
ERR11466014 Sensitive lineage4.3.4.2.1 None
ERR4818958 Sensitive lineage4.1.1.1 gb
ERR1336820 Sensitive La3;M.canetti None
ERR4829039 RR-TB lineage4.3.1 None
SRR1183111 HR-TB lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
SRR6046863 Sensitive lineage1.1.2 None
SRR9971112 HR-TB lineage2.2.1 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR18572454 RR-TB lineage4.9 None
ERR867567 RR-TB lineage3 None
SRR1173170 Other lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
ERR3283042 HR-TB lineage4.9 None
ERR363445 Other lineage4.9 None
DRR185024 Other lineage2.2.2 None
ERR363509 Sensitive lineage4.9 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
ERR3797047 MDR-TB lineage4.9 None
SRR5341293 Sensitive lineage4.9 None
SRR9971046 MDR-TB lineage4.8 None
ERR363447 Other lineage4.9 None
SRR12708392 Other lineage2.2.1 None
ERR1043163 Other La3;M.canetti None
ERR752012 HR-TB lineage1.1.1.1 None
ERR373947 Other lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR4819383 RR-TB lineage4.9 None
SRR1915485 Other La1.2.BCG None
ERR212125 HR-TB lineage4.9 None
ERR9787030 RR-TB lineage6.1.2 None
ERR1043164 Other La3;M.canetti None
ERR7821163 Other lineage2.2.1 None
SRR1062919 HR-TB lineage2.2.1 None
SRR1173770 Other lineage4.9 None
SRR1183144 RR-TB lineage2.2.1 None
ERR867525 Pre-XDR-TB lineage2.2.1 None
ERR6359082 Other lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
SRR1915487 Other La1.2.BCG None
SRR18002947 MDR-TB lineage2.2.1 None
ERR736856 HR-TB lineage4.9 None
ERR971389 Other lineage4.9 None
ERR181824 MDR-TB lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR11252664 Other lineage2.2.1 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR7535086 Other None
ERR987722 MDR-TB None
ERR4817060 Other None
ERR9786444 Sensitive lineage4.8 None
ERR266125 Other La3;M.canetti None
ERR4819011 Other lineage3.1.2.1 None
ERR4798262 HR-TB La1.2.BCG None
ERR4810624 MDR-TB lineage2.2 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR20632814 Sensitive lineage4.9 None
ERR2513724 Sensitive lineage4.3.2.1 None
ERR369157 Sensitive lineage4.9 None
SRR6046046 Other lineage4.9 None
ERR363499 Other lineage4.9 None
ERR369151 Other lineage4.9 None
SRR6045217 Other lineage4.9 None
ERR349296 Sensitive lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR1140724 Other lineage2.2.1 None
DRR184629 Other lineage2.2.1 None
ERR363474 Sensitive lineage4.9 None
ERR7801176 RR-TB lineage4.6.5 None
SRR5341400 Sensitive lineage4.9 None
ERR3283031 Other La3;lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
ERR363506 Sensitive lineage4.9 None
ERR926162 Sensitive lineage4.9 None
SRR1172310 MDR-TB lineage4.9 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
SRR1735596 RR-TB lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR7645973 Other lineage4.3.4.1 None
ERR369161 Sensitive lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR6358755 Other lineage4.6.1.1 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR373946 Other lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR11342686 MDR-TB lineage4.8 None
SRR11342651 MDR-TB lineage4.1.1.1 None
ERR4798823 HR-TB lineage4 None
SRR1140736 Other lineage4.1.2.1 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR867554 Other lineage4.3.4.1 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR7645901 MDR-TB lineage2.2.1 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR926160 Other lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR3283011 Other La3;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR349299 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
SRR7645906 Other lineage2.2.1 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
SRR1173740 Other lineage3;lineage4 None
ERR926163 Other lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR926159 Sensitive lineage4.9 None
SRR6045706 Other lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
ERR3797081 Sensitive lineage4.9 None
ERR4816100 Sensitive lineage1.1.2;lineage4.1.2.1;lineage4.1.3 None
ERR3801503 Other lineage4.6.2.2 None
SRR12708409 HR-TB lineage4.3.3 None
SRR10315556 Sensitive lineage2.2.1 None
SRR8217918 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR363502 Other lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR6045050 Sensitive lineage4.3.2.1 None
ERR363453 Other lineage4.9 None
ERR473332 Other lineage4.9 None
ERR4814748 Other lineage4.8 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR11342658 RR-TB lineage4.1.2 None
ERR4821408 Sensitive lineage4.1.2 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
ERR369156 Sensitive lineage4.9 None
SRR11342647 MDR-TB lineage4.1.1.3 None
ERR4797588 MDR-TB lineage3 None
ERR9786711 Other lineage4.6.2.2 None
SRR11349186 MDR-TB lineage4.3.3 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR23961559 Other La1.7;lineage4.2 None
ERR363500 Other lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
SRR1062871 RR-TB lineage4.3.4.2.1 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR1336826 Sensitive La3;M.canetti None
ERR6865513 Other lineage4.1.2.1 None
ERR3283018 HR-TB lineage4.9 None
SRR6046594 Other lineage4.9 None
ERR926155 Other lineage4.9 None
SRR1062918 Other lineage3 None
SRR6045503 Other lineage4.9 None
ERR4820586 Other lineage3 gb
SRR3675209 Sensitive lineage4.9 None
ERR11465279 Sensitive lineage4.3.4.1 None
ERR369159 Other lineage4.9 None
ERR551179 Sensitive M.canetti None
ERR363446 Other lineage4.9 None
ERR234659 HR-TB None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
ERR349300 Other lineage4.9 None
ERR369162 Other lineage4.9 None
SRR1049675 HR-TB lineage2.2.1 None
ERR3797029 Other lineage4.9 None
SRR5341373 Other lineage4.9 None
SRR9971114 Other lineage2.2.1 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR10993951 RR-TB La1.6 None
ERR1336821 Sensitive La3;M.canetti None
ERR373945 Other lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR6046385 Sensitive lineage4.9 None
SRR1049673 Pre-XDR-TB lineage3 None
ERR736817 HR-TB lineage4.3.4 None
ERR369158 Other lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR3675265 Other lineage4 None
SRR6079962 HR-TB lineage2.2.1.1 None
ERR4820833 Other lineage3;lineage4.9 None
ERR4818393 RR-TB lineage3;lineage4 None
ERR4798504 RR-TB lineage3 None
SRR6045832 Other lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR11342695 MDR-TB lineage4.8 None
SRR6046141 Other lineage4.9 None
ERR4178309 Other lineage4.1.2.1 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR926156 Other lineage4.9 None
ERR2513259 Other lineage3 None
ERR1336824 Sensitive La3;M.canetti None
ERR926154 Sensitive lineage4.9 None
ERR736848 Other lineage4.9 None
ERR926157 Other lineage4.9 None
SRR5153091 HR-TB lineage4.3.3 None
SRR6045555 Other lineage4.9 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR4799025 Other lineage4.8 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR9119669 MDR-TB lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR4816762 Sensitive lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR7069800 Other lineage3.1.2.1 None
ERR349265 Other lineage4.9 None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
SRR16627752 RR-TB lineage4.4 None
ERR1063855 Other lineage4.9 None
ERR363426 Sensitive lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR1336825 Sensitive La3;M.canetti None
ERR6865502 Sensitive lineage4 None
ERR4819528 RR-TB lineage3 None
ERR349330 Sensitive lineage4.9 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR12708414 HR-TB lineage2.2.1 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR11342636 MDR-TB lineage4.3.3 None
SRR6045219 HR-TB lineage4.9 None
ERR4819706 MDR-TB lineage4.3.4.2 None
ERR926158 Sensitive lineage4.9 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR10315567 HR-TB lineage2.2.1 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
SRR1181328 Other lineage2.2.1 None
SRR12708411 HR-TB lineage1.2.2.2 None
ERR349264 Other lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR7645899 Other lineage2.2.1 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR736875 HR-TB lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR867541 MDR-TB lineage4.2.1 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR551180 Sensitive M.canetti None
SRR12708413 HR-TB lineage4.1.1.3 None
ERR4769436 Other La1.3 None
ERR4799171 Pre-XDR-TB lineage4.8 None
SRR11342664 MDR-TB lineage2.2.2 None
ERR1336822 Sensitive M.canetti None
ERR1336823 Sensitive La3;M.canetti None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR5007161 RR-TB lineage4.1.1.3.1;lineage4.9 None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
ERR3283014 Other La3;lineage4.9 None
SRR1173281 Other lineage3 None
ERR363490 Other lineage4.9 None
ERR4798139 RR-TB lineage1.1.2 None
SRR14066533 RR-TB lineage1.1.1 None
ERR926164 Other lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR9786346 Sensitive lineage4.3.4.2 None
ERR4798431 Other lineage4.1;lineage4.9 None
SRR1140753 RR-TB lineage4.3.4.2.1 None
ERR2509886 Other lineage3 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR1180172 RR-TB lineage2.2.1 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR1034634 HR-TB lineage4.9 None
SRR6046485 Other lineage4.9 None
ERR363479 Other lineage4.9 None
SRR9971168 Other lineage4.3.2.1 None
SRR1735598 RR-TB lineage4.9 None
ERR349266 Other lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR3283028 Other La3;lineage4 None
ERR363456 Sensitive lineage4.9 None
SRR18289195 Sensitive M.canetti None
ERR11252736 Other lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR3597004 Sensitive M.canetti None
ERR6866807 RR-TB lineage4.9 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR4816113 Sensitive lineage4.1.1.1 None
ERR363449 Other lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR4817998 Other lineage3 None
ERR3797087 Sensitive lineage4.9 None
ERR176651 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
ERR4821176 Other lineage2.2.1 None
ERR11465514 MDR-TB lineage4.1.1.1 None
SRR13423649 Other lineage2.2.1 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
ERR363421 Other lineage4.9 None
ERR9787014 RR-TB lineage6.1.1 None
ERR3797079 Sensitive lineage4.9 None
ERR9786528 Sensitive lineage4.6.2.2 None
SRR10522763 Sensitive M.canetti None
SRR18910194 HR-TB lineage2.2.2 None
SRR3675292 Sensitive lineage4.9 None
SRR7755655 Other lineage4.1.2.1 None
ERR4188247 HR-TB lineage4.9 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR4816717 RR-TB lineage3.1.2.1 None
ERR926165 Other lineage4.9 None
ERR7801175 HR-TB lineage4.6.5 None
ERR176741 Other lineage4.9 None
ERR266126 Other La2;M.canetti None
SRR18003047 MDR-TB lineage2.2.1 None
SRR1180226 HR-TB lineage4.9 None
ERR4816610 Other lineage4.3.3 None
ERR369163 Other lineage4.9 None
SRR6045548 Other lineage4.9 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR10522783 Sensitive M.canetti None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR867573 Other lineage4.9 None
SRR11342671 RR-TB lineage4.1.3 None
ERR3275709 HR-TB lineage3 nl
ERR181887 Other lineage4.9 None
SRR17832802 HR-TB lineage3 None
SRR12708415 HR-TB lineage2.2.1 None
SRR6046133 HR-TB lineage4.9 None
ERR266120 Other M.canetti None
SRR24061597 Sensitive M.canetti None
SRR6046897 Sensitive lineage4.9 None
SRR1049674 HR-TB lineage2.2.1 None
ERR3799304 RR-TB lineage6.1.1 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR9029360 MDR-TB lineage2.2.1 None