Rv0668 - c.1209C>G
Drug resistance types
74 Sensitive
54 RR-TB
90 HR-TB
27 MDR-TB
20 Pre-XDR-TB
0 XDR-TB
100 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.1 | 7 |
| lineage3 | 27 |
| lineage1.1.3.1 | 3 |
| lineage4.9 | 37 |
| lineage4 | 66 |
| lineage4.8 | 9 |
| lineage4.1 | 2 |
| lineage1.2.1.1 | 2 |
| 68 | |
| lineage4.1.2.1 | 16 |
| lineage5 | 1 |
| lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | 1 |
| lineage2.1 | 2 |
| lineage3.1 | 1 |
| lineage4.1.1 | 4 |
| lineage4.3.3 | 6 |
| lineage2.2.1 | 33 |
| lineage3.1.2.1 | 2 |
| lineage4.7 | 2 |
| lineage4;lineage2 | 1 |
| lineage4.2.1.1 | 1 |
| lineage2.2.2 | 3 |
| lineage4.3.4.2 | 3 |
| lineage4.1.1.3.1 | 3 |
| lineage4.3.2.1 | 4 |
| lineage1.2.1.2.1 | 1 |
| lineage3.1.1 | 3 |
| lineage4.4.1.1 | 2 |
| lineage1.2.2.2 | 2 |
| lineage4.1.2 | 3 |
| lineage3.1.2.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage1.1.2 | 3 |
| lineage4.3.1 | 1 |
| lineage4.3.1.1 | 1 |
| lineage2.2.1.1 | 5 |
| La2 | 1 |
| lineage4.3.4.2.1 | 5 |
| lineage4.1.1.1 | 2 |
| lineage4.3.4.1 | 2 |
| lineage2.2 | 4 |
| La1.8.1 | 1 |
| lineage4.6.2.2 | 3 |
| lineage6.1.1 | 2 |
| lineage5.1.2 | 1 |
| La1.3 | 1 |
| La1 | 1 |
| lineage3.1.2 | 1 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.6.1.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.6.5 | 2 |
| lineage6 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| La1.6 | 1 |
| lineage1.1.1 | 1 |
| lineage4.4 | 1 |
| lineage4.2;La1.7 | 1 |
| lineage1.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 365 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4815394 | RR-TB | lineage4.2.1 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4814617 | Other | lineage1.1.3.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR181824 | HR-TB | lineage4 | None | ERR4814748 | Other | lineage4.8 | None | SRR3675265 | Other | lineage4 | None | ERR4814841 | Other | lineage4.1 | None | SRR3675261 | Other | lineage1.2.1.1 | None | ERR4815528 | Other | lineage4.8 | None | ERR181887 | HR-TB | None | ERR176651 | HR-TB | None | SRR3675292 | Sensitive | lineage4 | None | ERR4815910 | Other | lineage4.1.2.1 | None | ERR176740 | HR-TB | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR4816967 | RR-TB | lineage5 | None | SRR3675510 | Other | None | ERR4815909 | Other | lineage4.8 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR4816100 | Sensitive | lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816227 | RR-TB | lineage3 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | ERR4816183 | Other | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4817060 | RR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR212138 | HR-TB | lineage4 | None | ERR4816464 | Other | lineage3 | None | ERR4817131 | Pre-XDR-TB | None | SRR3675571 | HR-TB | None | SRR3742667 | Sensitive | lineage4.9 | None | ERR4816510 | Other | lineage4.1.2.1 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR2229791 | RR-TB | lineage4.9 | None | ERR4817189 | Other | lineage4.7 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4816756 | RR-TB | None | ERR4815811 | HR-TB | lineage4.2.1.1 | None | ERR4816831 | Other | lineage4.1.2.1 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4817874 | Other | lineage3 | None | ERR4816425 | Other | lineage2.2.2 | None | ERR2512986 | Other | lineage3 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR2512849 | RR-TB | lineage1.1.3.1 | None | ERR4817998 | Other | lineage3 | None | ERR234659 | HR-TB | None | ERR2513259 | Other | lineage3 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR2509886 | RR-TB | lineage3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR2513438 | Sensitive | lineage4.1.2.1 | None | ERR4818811 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR4818393 | RR-TB | lineage3 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4818977 | RR-TB | lineage4.1.2.1 | None | SRR5007170 | RR-TB | lineage4.9 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR5341373 | HR-TB | lineage4 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4820266 | RR-TB | lineage3 | None | ERR4819305 | RR-TB | lineage4.9 | None | SRR5341400 | HR-TB | lineage4 | None | ERR4819515 | HR-TB | lineage4.2.1 | None | ERR4820324 | Other | lineage4 | None | ERR4819456 | Other | lineage4.8 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR4820746 | RR-TB | lineage3 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | SRR5341432 | HR-TB | lineage4 | None | ERR4820503 | Other | lineage2.2.1 | None | ERR4819765 | Other | lineage4.1 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | SRR5341293 | HR-TB | lineage4 | None | ERR4819948 | Other | lineage4.4.1.1 | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | ERR2514968 | Other | lineage4.3.3 | None | ERR4820030 | Other | lineage4.9 | None | ERR4820026 | Other | lineage3 | None | ERR4820833 | HR-TB | None | ERR4820959 | Other | lineage4.1.2.1 | None | ERR6359082 | Other | lineage4.9 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR4821007 | RR-TB | lineage1.2.2.2 | None | SRR5341470 | HR-TB | None | ERR4821214 | RR-TB | None | SRR6045503 | HR-TB | None | ERR4821915 | RR-TB | lineage4.9 | None | SRR6045450 | Other | lineage4.9 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821176 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR4821408 | Sensitive | lineage4.1.2 | None | SRR6045555 | HR-TB | None | ERR4822222 | Other | lineage3.1.2.2 | None | ERR4822104 | RR-TB | lineage3 | None | ERR4821572 | Other | lineage2.1 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR5818685 | Sensitive | None | SRR6046133 | HR-TB | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6044841 | Other | lineage4.9 | None | SRR6044838 | Other | lineage4.9 | None | SRR6044936 | Other | lineage4 | None | SRR6045233 | HR-TB | None | SRR6045957 | Other | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6045217 | Other | lineage4 | None | SRR6045327 | HR-TB | None | SRR6046046 | Other | None | SRR6045267 | RR-TB | lineage4 | None | SRR6046385 | Other | lineage4.9 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR6045384 | Other | lineage4.1.2 | None | SRR6045399 | Other | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046397 | Other | None | ERR4829039 | RR-TB | lineage4.3.1 | None | SRR6046482 | HR-TB | None | ERR4830856 | MDR-TB | lineage4.4.1.1 | None | SRR6046644 | HR-TB | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6046802 | Other | lineage4 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | ERR502524 | HR-TB | La2 | None | ERR11466014 | Sensitive | lineage4.3.4.2.1 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR8217918 | HR-TB | None | ERR4818958 | Sensitive | lineage4.1.1.1 | gb | SRR9971372 | MDR-TB | lineage4.1.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7535086 | Other | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR7645973 | Other | lineage4.3.4.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | DRR185024 | Other | lineage2.2.2 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR323039 | HR-TB | None | DRR184629 | Other | lineage2.2.1 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR9971168 | Other | lineage4.3.2.1 | None | ERR323045 | HR-TB | None | ERR323053 | HR-TB | None | ERR11465279 | Sensitive | lineage4.3.4.1 | None | ERR1023525 | HR-TB | lineage4 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR11465514 | MDR-TB | lineage4.1.1.1 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1034634 | HR-TB | None | ERR3283014 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063859 | HR-TB | None | ERR10796571 | Other | lineage4.9 | None | ERR1063855 | Other | lineage4 | None | ERR1063857 | HR-TB | None | ERR1063858 | HR-TB | None | ERR4820586 | Other | lineage3 | gb | ERR3283025 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3283028 | Other | None | ERR3283031 | HR-TB | None | ERR3283047 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3283057 | HR-TB | lineage4 | None | ERR3445501 | HR-TB | None | ERR3445503 | HR-TB | None | ERR349298 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349299 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR3797043 | HR-TB | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797036 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797060 | Other | La1.8.1 | None | ERR3797064 | Sensitive | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR3797086 | Other | lineage4.9 | None | ERR3797087 | Sensitive | lineage4 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4798431 | HR-TB | None | ERR4188247 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR4769521 | HR-TB | None | ERR4798139 | Sensitive | lineage1.1.2 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4798262 | HR-TB | La1 | None | ERR4798504 | Other | lineage3 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | ERR6197044 | RR-TB | lineage4.9 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR736848 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736835 | HR-TB | None | ERR736839 | Other | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6359045 | HR-TB | None | ERR6865502 | Sensitive | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR736875 | HR-TB | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR736865 | HR-TB | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR9029360 | MDR-TB | lineage2.2.1 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR9119669 | HR-TB | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR987722 | HR-TB | None | ERR9787014 | Other | lineage6.1.1 | None | ERR9787030 | Sensitive | lineage6 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | SRR11342643 | MDR-TB | lineage4.1.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1140736 | RR-TB | None | SRR1173170 | Other | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173770 | Other | lineage4.9 | None | SRR1173740 | Other | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1181328 | Other | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR14782405 | HR-TB | None | SRR17658565 | Other | lineage3 | None | SRR17832802 | HR-TB | lineage3 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18572454 | RR-TB | lineage4.9 | None | SRR20632814 | Sensitive | lineage4 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR24061597 | Sensitive | None | ERR176778 | HR-TB | None | ERR4815225 | RR-TB | lineage1.2.2 | None | ERR176779 | HR-TB | None | ERR4814312 | Other | lineage4 | None | ERR4815777 | Other | lineage4.9 | None |
|---|
