Rv3457c - c.378C>G
Drug resistance types
95 Sensitive
3 RR-TB
131 HR-TB
22 MDR-TB
11 Pre-XDR-TB
0 XDR-TB
135 Other
lineage Counts
| lineage | Count |
|---|---|
| 143 | |
| La2 | 1 |
| lineage4.1.2 | 2 |
| lineage2.2.1 | 24 |
| lineage4 | 73 |
| lineage4.8 | 7 |
| lineage4.9 | 52 |
| lineage4.4.1.2 | 1 |
| La1 | 2 |
| lineage4.6.1.1 | 3 |
| lineage4.1.2.1 | 15 |
| lineage4.6.2.2 | 6 |
| lineage4.1.3 | 2 |
| lineage3 | 8 |
| lineage4;lineage3.1 | 1 |
| lineage6.1.1 | 2 |
| lineage5.1.2 | 1 |
| lineage2 | 3 |
| lineage1.1.2 | 4 |
| lineage1.2.2.2 | 2 |
| lineage3.1.2 | 1 |
| lineage2.2 | 7 |
| lineage4.5 | 2 |
| lineage4.3.2 | 1 |
| lineage5.2 | 3 |
| lineage4.1 | 2 |
| lineage4.8;lineage4.1 | 2 |
| lineage4.1.1 | 3 |
| lineage6.1.3 | 1 |
| lineage6 | 1 |
| lineage6.3.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.3.3 | 2 |
| lineage2.2.1.1 | 5 |
| lineage3.1 | 2 |
| lineage1.2.1.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.3.4.1 | 1 |
| lineage1.1.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.3.4.2.1 | 1 |
| La1.8.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage5.1.4 | 1 |
| lineage4.2.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 397 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR502532 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR294266 | HR-TB | None | ERR502943 | HR-TB | None | SRR8217918 | HR-TB | None | SRR7496517 | Other | None | SRR7496509 | Other | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323039 | HR-TB | None | SRR9971114 | Other | lineage2.2.1 | None | ERR323043 | HR-TB | None | ERR323107 | Other | lineage4 | None | ERR11049020 | Other | lineage4.8 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR323053 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR1035157 | Other | lineage4.9 | None | ERR3283047 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR3283031 | HR-TB | None | ERR3283051 | Other | lineage4.9 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR3283024 | Other | None | ERR3283027 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283036 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283058 | Other | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349265 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349299 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR373947 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797044 | Other | None | ERR3797043 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797061 | Other | None | ERR3797048 | HR-TB | None | ERR3797058 | Other | lineage4.9 | None | ERR3797071 | Other | lineage4.9 | None | ERR3797063 | HR-TB | None | ERR3797069 | Other | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR387051 | HR-TB | None | ERR400320 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR400529 | Other | lineage3 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4178226 | Sensitive | lineage4 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4407463 | HR-TB | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | ERR4797313 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4798139 | Sensitive | lineage1.1.2 | None | ERR4799025 | Pre-XDR-TB | None | ERR4798431 | HR-TB | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4800341 | Other | lineage3 | None | ERR4810741 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None | ERR4811142 | MDR-TB | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR5336148 | Other | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6358991 | HR-TB | None | ERR6359045 | HR-TB | None | ERR6865502 | Sensitive | lineage4 | None | ERR736839 | Other | None | ERR736835 | HR-TB | None | ERR702404 | HR-TB | None | ERR702406 | HR-TB | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | None | ERR736874 | HR-TB | None | ERR736867 | HR-TB | None | ERR7821163 | Other | lineage2.2.1 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9117709 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786440 | Other | lineage4.1 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR9786515 | Other | lineage4.1.2.1 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786604 | Other | None | ERR9786671 | Other | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786843 | Other | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9787165 | Other | lineage6 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR9787197 | Other | None | ERR987722 | HR-TB | None | SRR1169194 | Other | None | ERR990545 | Other | lineage3 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR1172234 | Other | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1173118 | Other | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172857 | MDR-TB | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1172951 | Other | None | SRR1173629 | Other | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173384 | Other | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173153 | HR-TB | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR1173363 | HR-TB | None | SRR1173400 | Other | None | SRR1175074 | MDR-TB | None | SRR1173778 | Other | None | SRR1175049 | RR-TB | None | SRR1173706 | Other | lineage4.9 | None | SRR1173788 | Other | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1184388 | Other | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184380 | HR-TB | None | SRR1184294 | HR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184372 | MDR-TB | None | SRR1184381 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR1196566 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196677 | HR-TB | lineage2 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR12142341 | HR-TB | None | SRR1196768 | MDR-TB | None | SRR12416824 | HR-TB | None | SRR13591342 | HR-TB | lineage4.1.1.3 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR13837696 | HR-TB | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR15368973 | Other | None | SRR16157123 | Other | lineage4.9 | None | SRR17658565 | Other | lineage3 | None | SRR20969677 | HR-TB | lineage2 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | ERR11082350 | MDR-TB | lineage4.6.2.2 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR8692905 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675455 | Sensitive | lineage4 | None | ERR176793 | Other | lineage4.1.1 | None | ERR4815604 | HR-TB | None | SRR3675477 | Other | lineage4.9 | None | SRR3675221 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR181744 | HR-TB | None | SRR3675465 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675488 | HR-TB | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675234 | Other | None | SRR3675222 | Other | None | SRR3675236 | HR-TB | None | SRR3675229 | Other | lineage4 | None | SRR3675265 | Other | lineage4 | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675387 | Sensitive | None | SRR3675279 | Other | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675311 | Other | None | SRR3675501 | HR-TB | None | ERR176740 | HR-TB | None | ERR2229542 | Other | lineage4.8 | None | SRR3675456 | HR-TB | None | SRR3675522 | Other | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | SRR3675542 | Other | lineage4.9 | None | ERR4816999 | Other | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR4817060 | RR-TB | None | ERR2027263 | Other | lineage4 | None | ERR4816151 | Other | lineage4.8 | None | ERR212034 | HR-TB | None | SRR3675555 | HR-TB | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR212001 | HR-TB | None | ERR212123 | Other | None | SRR3675577 | Sensitive | lineage4.9 | None | SRR3675572 | Other | None | ERR212121 | HR-TB | None | SRR3742665 | HR-TB | None | SRR3675571 | HR-TB | None | ERR4816466 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR4816656 | HR-TB | None | ERR553132 | MDR-TB | lineage4.1.2.1 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4817735 | Other | lineage4.8 | None | ERR4818021 | Other | La1.8.1 | None | ERR4817998 | Other | lineage3 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR4818536 | Other | lineage4.9 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4818929 | HR-TB | None | ERR234659 | HR-TB | None | ERR4818252 | Other | lineage4.1.1.2 | None | SRR5341373 | HR-TB | lineage4 | None | ERR2513283 | Other | lineage5.1.4 | None | SRR5007188 | Other | lineage4 | None | ERR2512770 | Other | lineage4.2.1 | None | SRR5341396 | Other | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | ERR2514125 | Other | lineage3 | None | ERR4819462 | Other | lineage4 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR5341432 | HR-TB | lineage4 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5266542 | Pre-XDR-TB | lineage2.2.1 | ru | ERR2514552 | Sensitive | lineage3 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR2514692 | Other | None | SRR5341313 | HR-TB | None | SRR5341302 | HR-TB | None | ERR2514821 | Other | lineage2.2.1 | None | SRR5341323 | Sensitive | lineage4 | None | ERR2446382 | Other | lineage4 | None | SRR5341315 | Sensitive | None | SRR5341333 | HR-TB | None | ERR2693231 | Other | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR2517475 | Other | lineage4 | None | SRR5341470 | HR-TB | None | ERR2693230 | Other | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR6045503 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045519 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | ERR2706950 | MDR-TB | lineage5.2 | cd | SRR6045555 | HR-TB | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6044790 | HR-TB | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044838 | Other | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR6044876 | Sensitive | lineage4 | None | SRR6046210 | Other | lineage4 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6044890 | Other | lineage4.9 | None | SRR6044925 | Sensitive | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6045264 | Sensitive | lineage2.2.1 | None | SRR6045327 | HR-TB | None | ERR2693232 | Other | lineage4.9 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046066 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046225 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | SRR6045399 | Other | None | SRR6046245 | Other | lineage4.9 | None | SRR6046594 | HR-TB | lineage4 | None | ERR4830353 | Other | None | SRR6046397 | Other | None | SRR6046540 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6046802 | Other | lineage4 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR323037 | HR-TB | lineage4 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4831117 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4831638 | Sensitive | None | SRR6789626 | Other | None |
|---|
