Rv0639 - c.171G>T


Drug resistance types
61 Sensitive 4 RR-TB 21 HR-TB 11 MDR-TB 1 Pre-XDR-TB 1 XDR-TB 34 Other
lineage Counts
lineage Count
lineage4.9 81
lineage3;lineage4.2.2 1
lineage4.9;lineage6.3 1
lineage2.2.1 3
lineage3 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage2.2.1;lineage4.9 1
lineage1;lineage4.9 1
lineage4 3
La1.7.1;La1.7.X-unk4 1
lineage4.6.2.2 2
La1.7;lineage4.9 1
La1.7.1;lineage4.9 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage2.2.1.1 2
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
M.canetti;lineage4.2 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.6;lineage4 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.9;lineage6.1.3 1
lineage4.1;lineage4.9 1
lineage4.4.1.1.1 1
La1.6;La3;M.canetti;lineage4.2.2 1
M.canetti;lineage4.2;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage4.8 1
lineage4.1.2.1 2
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La3;lineage4.9 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage1.1.3.1 1
1
lineage4.9;lineage7 1
lineage4.1.1.1 1
lineage3.1;lineage9 1
La1.7;lineage4.9;lineage6 1
lineage4.3.4 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage4.3.1;lineage4.9;lineage6 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 133
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675260 Sensitive lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR4798776 Sensitive lineage3;lineage4.2.2 in
ERR926164 Other lineage4.9 None
ERR373946 Sensitive lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR6046225 Other lineage4.9;lineage6.3 None
ERR349296 Sensitive lineage4.9 None
ERR349264 Sensitive lineage4.9 None
ERR349330 Sensitive lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
ERR926156 Sensitive lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
SRR6832787 Sensitive lineage2.2.1 None
ERR926165 Sensitive lineage4.9 None
ERR363453 Sensitive lineage4.9 None
ERR4817998 Other lineage3 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR926162 Sensitive lineage4.9 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
ERR373945 Sensitive lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR363426 Sensitive lineage4.9 None
SRR6046897 Sensitive lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR1063862 HR-TB lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR363509 Sensitive lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR29096530 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4 None
ERR971389 Sensitive lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR1175512 Sensitive lineage4.9 None
ERR373947 Other lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR779852 Sensitive lineage4.9 None
ERR349266 Sensitive lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR6045892 Sensitive lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR4815815 Sensitive lineage4.9 None
ERR181824 HR-TB lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR176778 HR-TB lineage4.9 None
SRR28351554 Sensitive La1.6;lineage4 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR6045503 Sensitive lineage4.9 None
ERR363500 Sensitive lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR926157 Sensitive lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR369162 Other lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
SRR28351347 Other lineage3 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR369158 Other lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR4188247 HR-TB lineage4.9 None
ERR6358979 Other lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR736848 Other lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR363421 Sensitive lineage4.9 None
ERR363479 Sensitive lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
ERR6359066 HR-TB lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
ERR181887 Other lineage4.9 None
ERR349265 Other lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
ERR349299 Other lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR363499 Sensitive lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR1023509 Other lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR6045706 Sensitive lineage4.9 None
SRR6832249 Sensitive lineage2.2.1 None
SRR1180147 Other lineage2.2.1.1 None
SRR5341456 Other lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR9786843 Other None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR369159 Sensitive lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR736875 HR-TB lineage4.9 None
SRR6046385 Sensitive lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
ERR4820112 Sensitive lineage4.1.1.1 None
ERR1063858 HR-TB lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR176651 Other lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR3797029 Other lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR369163 Sensitive lineage4.9 None
ERR363498 Sensitive lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR4178309 Other lineage4.1.2.1 None
ERR363506 Sensitive lineage4.9 None
ERR363490 Sensitive lineage4.9 None
ERR349300 Sensitive lineage4.9 None
SRR3675446 RR-TB lineage4.9 None
ERR926160 Sensitive lineage4.9 None
SRR5341330 Other lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR6865502 Sensitive lineage4 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR363449 Sensitive lineage4.9 None
ERR363474 Sensitive lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR926163 Other lineage4.9 None