Rv0668 - c.1713G>C
Drug resistance types
115 Sensitive
2 RR-TB
173 HR-TB
18 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
132 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 75 |
| 163 | |
| lineage5.1.2 | 1 |
| lineage4.1.2.1 | 19 |
| lineage3 | 7 |
| lineage4.9 | 86 |
| lineage2 | 4 |
| lineage2.2.1 | 20 |
| lineage1.2.2.2 | 1 |
| La1 | 1 |
| lineage3.1.2 | 1 |
| lineage2.2 | 6 |
| lineage4.5 | 2 |
| lineage4.3.2 | 2 |
| lineage5.2 | 2 |
| lineage1.1.2 | 1 |
| lineage4.8;lineage4.1 | 1 |
| lineage4.1.1 | 2 |
| lineage4.1.3 | 2 |
| lineage4.6.2.2 | 1 |
| lineage6.1.3 | 1 |
| lineage6 | 2 |
| lineage6.3.1 | 1 |
| lineage4.4.1.1 | 2 |
| lineage2.2.1.1 | 2 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage3.1 | 4 |
| lineage4.3.3 | 2 |
| lineage1.2.1.2 | 1 |
| La1.7.1 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage3.1.3 | 1 |
| lineage4.8 | 4 |
| lineage4.1 | 3 |
| lineage3;lineage2.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4;lineage2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.8;La3 | 1 |
| La1.8.1 | 2 |
| lineage4.3.4.2.1 | 8 |
| lineage4.3.4.1 | 1 |
| lineage4.3.4.2.1;lineage4.3.4.1 | 1 |
| lineage5.1.4 | 1 |
| lineage4.7 | 2 |
| lineage4.2.1 | 2 |
| lineage1.1 | 1 |
| La2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 449 |
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4188350 | HR-TB | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4407463 | HR-TB | None | ERR4769419 | Other | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473332 | Other | lineage4 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769521 | HR-TB | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797313 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4798431 | HR-TB | None | ERR4800341 | Other | lineage3 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4798504 | Other | lineage3 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4811022 | HR-TB | None | ERR4810741 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR4811142 | MDR-TB | None | ERR5336148 | Other | None | ERR6358837 | HR-TB | None | ERR6359069 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR4811105 | HR-TB | None | ERR4812155 | Sensitive | None | ERR6359045 | HR-TB | None | ERR6359070 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR702406 | HR-TB | None | ERR702404 | HR-TB | None | ERR736865 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736839 | Other | None | ERR8976043 | HR-TB | None | ERR736874 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR736867 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9117709 | HR-TB | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786515 | Other | lineage4.1.2.1 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9119669 | HR-TB | None | ERR9786604 | Other | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786843 | Other | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR987722 | HR-TB | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9787197 | Other | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR9787030 | Sensitive | lineage6 | None | ERR9787165 | Other | lineage6 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR1169194 | Other | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1172234 | Other | None | SRR1172717 | Other | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1173363 | HR-TB | None | SRR1172857 | MDR-TB | None | SRR1173153 | HR-TB | None | SRR1173166 | Other | lineage4.9 | None | SRR1172951 | Other | None | SRR1173400 | Other | None | SRR1173384 | Other | lineage4 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173788 | Other | None | SRR1173629 | Other | None | SRR1173778 | Other | None | SRR1174897 | HR-TB | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175074 | MDR-TB | None | SRR1175090 | Other | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1184381 | MDR-TB | None | SRR1184294 | HR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184372 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196566 | HR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR12416824 | HR-TB | None | SRR1196768 | MDR-TB | None | SRR12142341 | HR-TB | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR13861528 | HR-TB | lineage4.9 | None | SRR15368973 | Other | None | SRR16157123 | Other | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19303884 | HR-TB | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR19304036 | HR-TB | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969677 | HR-TB | lineage2 | None | SRR3675455 | Sensitive | lineage4 | None | ERR11081257 | Other | lineage4.8 | None | ERR11081864 | Other | lineage3 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR8692887 | Other | None | ERR4815604 | HR-TB | None | SRR3675465 | HR-TB | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR6325445 | HR-TB | None | SRR3675477 | Other | lineage4.9 | None | ERR176793 | Other | lineage4.1.1 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR1035239 | HR-TB | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | ERR4815471 | Other | lineage4.9 | None | SRR3675486 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR181744 | HR-TB | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675221 | HR-TB | None | SRR3675488 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR3275450 | Other | lineage4 | None | SRR3675229 | Other | lineage4 | None | SRR3675236 | HR-TB | None | SRR3675222 | Other | None | SRR3675501 | HR-TB | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675279 | Other | None | SRR3675318 | Other | lineage4.9 | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675311 | Other | None | SRR3675387 | Sensitive | None | SRR3675383 | HR-TB | None | ERR176740 | HR-TB | None | ERR4816964 | Other | lineage4.9 | None | ERR4815752 | Other | lineage4.9 | None | SRR3675456 | HR-TB | None | ERR2229542 | Other | lineage4.8 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | ERR4816999 | Other | None | ERR212001 | HR-TB | None | ERR2027263 | Other | lineage4 | None | SRR3675545 | HR-TB | None | ERR4817037 | Other | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR4817060 | RR-TB | None | ERR212034 | HR-TB | None | SRR3675555 | HR-TB | None | SRR3675558 | HR-TB | None | SRR3675572 | Other | None | ERR212123 | Other | None | SRR3675577 | Sensitive | lineage4.9 | None | SRR3675574 | HR-TB | None | ERR4816762 | Other | lineage4;lineage2 | None | SRR3742665 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | SRR3675571 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4817998 | Other | lineage3 | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR7496472 | Other | None | ERR4818021 | Other | La1.8.1 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR2446566 | Other | lineage4.1 | None | ERR234659 | HR-TB | None | ERR245790 | Sensitive | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR245787 | Sensitive | lineage4.3.4.2.1 | mw | ERR245799 | Sensitive | lineage4.3.4.1 | mw | ERR4819051 | Other | lineage4 | None | ERR245797 | Sensitive | lineage4.3.4.2.1;lineage4.3.4.1 | mw | ERR245798 | Sensitive | lineage4.3.4.2.1 | mw | ERR245812 | Sensitive | lineage4.3.4.2.1 | mw | ERR245808 | Sensitive | lineage4.3.4.2.1 | mw | ERR245815 | Sensitive | lineage4.3.4.2.1 | None | ERR245821 | Other | lineage4.3.4.2.1 | None | ERR245824 | Sensitive | lineage4.3.4.2.1 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR4818394 | Other | lineage4.9 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4818615 | Other | None | SRR5007188 | Other | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | ERR4819357 | Other | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR1035138 | MDR-TB | None | ERR4819781 | Other | lineage2.2.1 | None | ERR2446382 | Other | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341302 | HR-TB | None | ERR4819933 | Other | lineage4.9 | None | SRR5341313 | HR-TB | None | ERR4819932 | Other | lineage4.7 | None | SRR5341315 | Sensitive | None | SRR5341333 | HR-TB | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR2515228 | Other | lineage2.2.1 | None | ERR2517475 | Other | lineage4 | None | ERR2517514 | Sensitive | lineage4.8 | None | SRR5341470 | HR-TB | None | ERR2693230 | Other | None | ERR2693239 | HR-TB | None | ERR2693257 | Other | None | SRR6045664 | Other | lineage4.2.1 | None | ERR2693227 | Other | lineage4.9 | None | SRR6045503 | HR-TB | None | SRR6045526 | HR-TB | None | ERR278594 | HR-TB | None | SRR6046141 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6044780 | Other | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044838 | Other | lineage4.9 | None | SRR6044855 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6045233 | HR-TB | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046066 | HR-TB | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6045327 | HR-TB | None | SRR6045399 | Other | None | SRR6046305 | Other | lineage4.9 | None | SRR6325442 | HR-TB | None | SRR6046245 | Other | lineage4.9 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6325444 | HR-TB | None | SRR6046362 | HR-TB | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR6046397 | Other | None | SRR6046514 | HR-TB | None | ERR3275196 | Other | lineage2.2.1 | nl | SRR6046460 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6046897 | Sensitive | lineage4 | None | SRR6325447 | HR-TB | None | SRR6046802 | Other | lineage4 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR294248 | HR-TB | None | ERR4831638 | Sensitive | None | SRR6831950 | Other | lineage4.3.3 | None | ERR294266 | HR-TB | None | SRR6982365 | Other | lineage2.2.1 | None | SRR6789626 | Other | None | ERR323034 | HR-TB | lineage3.1 | None | ERR502943 | HR-TB | None | ERR323036 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR502532 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311090 | HR-TB | None | ERR5311081 | HR-TB | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR7496509 | Other | None | ERR323038 | HR-TB | None | SRR7496471 | Sensitive | None | SRR7496517 | Other | None | SRR7496523 | Other | lineage4.7 | None | ERR323039 | HR-TB | None | SRR7585435 | Other | lineage4.9 | None | ERR323041 | HR-TB | None | ERR323043 | HR-TB | None | ERR323053 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR1034634 | HR-TB | None | ERR323063 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR067712 | HR-TB | lineage4 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1034652 | Other | None | ERR1035157 | Other | lineage4.9 | None | ERR108471 | HR-TB | lineage4 | None | ERR1063857 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR3283017 | HR-TB | None | ERR11049020 | Other | lineage4.8 | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283027 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR349265 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR373947 | Sensitive | lineage4 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3468544 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR3797016 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3797058 | Other | lineage4.9 | None | ERR3797069 | Other | None | ERR3797063 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797083 | HR-TB | None | ERR3797087 | Sensitive | lineage4 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR387051 | HR-TB | None |
|---|
