Rv0668 - c.297G>C
Drug resistance types
99 Sensitive
45 RR-TB
41 HR-TB
32 MDR-TB
13 Pre-XDR-TB
1 XDR-TB
108 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 65 |
| lineage4 | 67 |
| lineage3.1.1 | 3 |
| lineage2.2.1 | 32 |
| lineage4.3.3 | 10 |
| lineage1.1.1 | 1 |
| lineage4.2.2.1 | 1 |
| lineage3 | 19 |
| lineage2.2.2 | 4 |
| La1.8.1 | 6 |
| lineage2.2.1.1 | 2 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.6.2.2 | 4 |
| lineage2.2 | 3 |
| lineage4.1 | 4 |
| lineage1.2.2 | 1 |
| 46 | |
| lineage4.1.2.1 | 13 |
| lineage4.1.1.3 | 2 |
| lineage4.8 | 8 |
| lineage5 | 1 |
| lineage4.1.1 | 2 |
| lineage3.1 | 1 |
| lineage3.1.2.1 | 2 |
| lineage4.5 | 3 |
| lineage6 | 1 |
| lineage5.1.4 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.2.1 | 5 |
| lineage4.8.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.4.1.1 | 4 |
| lineage4.3.2.1 | 2 |
| lineage4.3.4.2 | 1 |
| lineage4.9;lineage4.6.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.1.3 | 1 |
| lineage2.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.3.1 | 1 |
| lineage5.1.1 | 1 |
| lineage4.6.1.1 | 2 |
| lineage4.9;lineage1.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
| La1.2 | 2 |
| lineage4.7;lineage4.3.4.2 | 2 |
| lineage4.6.5 | 2 |
| lineage4.1.1.2 | 1 |
| lineage4.4.1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 339 |
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR12882669 | RR-TB | lineage3.1.1 | None | SRR1175508 | Other | lineage4.9 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR13837507 | HR-TB | lineage4.9 | None | SRR13837530 | Sensitive | lineage4.9 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR16149133 | MDR-TB | lineage4.2.2.1 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR17658565 | Other | lineage3 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR1792011 | Other | La1.8.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR19303773 | Other | lineage4.6.2.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR2100067 | Other | lineage4.3.3 | None | SRR20970016 | Other | lineage2.2 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR4814312 | Other | lineage4 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | ERR4815310 | Other | None | ERR4815709 | Sensitive | lineage4.1.2.1 | None | ERR4815777 | Other | lineage4.9 | None | SRR3675488 | HR-TB | None | ERR4814396 | Sensitive | lineage4.1.1.3 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675222 | Other | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR3275450 | Other | lineage4 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675229 | Other | lineage4 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4814763 | Other | lineage2.2.1 | None | SRR3675501 | HR-TB | None | SRR3675234 | Other | None | ERR1750908 | Sensitive | lineage4 | None | ERR4814821 | Other | lineage2.2.1 | None | ERR4815502 | Other | lineage4.1 | None | SRR3675247 | Other | lineage4.9 | None | ERR4814878 | Sensitive | lineage4.8 | None | SRR3675266 | Sensitive | lineage4.9 | None | ERR4814841 | Other | lineage4.1 | None | SRR3675265 | Other | lineage4 | None | SRR3675270 | HR-TB | None | SRR3675279 | Other | None | ERR4816967 | RR-TB | lineage5 | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675318 | Other | lineage4.9 | None | SRR3675387 | Sensitive | None | ERR4815909 | Other | lineage4.8 | None | ERR4815550 | Other | lineage4 | None | SRR3675577 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4816300 | Other | lineage4.1.2.1 | None | ERR2229148 | Other | lineage4.8 | dk | SRR3675522 | Other | None | SRR3675547 | Other | lineage4.9 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816476 | Other | lineage3.1.2.1 | None | ERR2229233 | Sensitive | lineage4 | None | ERR4817131 | Pre-XDR-TB | None | ERR2229234 | RR-TB | lineage4.8 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR2513405 | Other | lineage2.2.1 | None | ERR4816425 | Other | lineage2.2.2 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4817998 | Other | lineage3 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR2510831 | Other | lineage4.3.3 | None | ERR4818173 | Other | lineage2.2.1 | None | ERR2513438 | Sensitive | lineage4.1.2.1 | None | ERR4818787 | MDR-TB | lineage6 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818825 | HR-TB | lineage4.1.2.1 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR2509886 | RR-TB | lineage3 | None | ERR2512606 | MDR-TB | lineage3 | None | ERR4818393 | RR-TB | lineage3 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4819093 | Other | lineage4.3.3 | None | ERR2513283 | Other | lineage5.1.4 | None | SRR5007170 | RR-TB | lineage4.9 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR2513508 | Sensitive | lineage3 | gb | ERR2512770 | Other | lineage4.2.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR4819307 | RR-TB | lineage4 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4819198 | Other | lineage2.2.1 | None | SRR5341396 | Other | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR4820324 | Other | lineage4 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR4820746 | RR-TB | lineage3 | None | ERR1035138 | MDR-TB | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | ERR4820503 | Other | lineage2.2.1 | None | ERR2446382 | Other | lineage4 | None | ERR4819910 | Other | lineage4.9 | None | ERR1023509 | Other | None | ERR2515032 | Other | lineage3 | None | ERR4820833 | HR-TB | None | ERR4820580 | Sensitive | lineage4.9;lineage4.6.2 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341330 | HR-TB | None | ERR4820075 | Other | lineage4.1.2.1 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR2517475 | Other | lineage4 | None | ERR4821791 | HR-TB | lineage4.1.2.1 | None | ERR2693231 | Other | None | ERR4821007 | RR-TB | lineage1.2.2.2 | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR6045503 | HR-TB | None | ERR2693230 | Other | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR6045519 | HR-TB | None | ERR4821154 | Other | lineage2.2.1 | gb | ERR2660539 | Other | lineage4.9 | None | ERR4821492 | HR-TB | lineage3 | None | ERR4821276 | Other | lineage3 | None | ERR4821176 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821214 | RR-TB | None | ERR4822004 | Other | lineage1.1.1.1 | gb | ERR4821488 | Sensitive | lineage4.1.3 | None | ERR4821572 | Other | lineage2.1 | None | SRR6045909 | Other | lineage4.8 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045706 | Sensitive | lineage4 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR2693232 | Other | lineage4.9 | None | SRR6044841 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6044936 | Other | lineage4 | None | SRR6045233 | HR-TB | None | SRR6045053 | Other | None | SRR6046046 | Other | None | SRR6045289 | Other | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046492 | Other | None | SRR6046385 | Other | lineage4.9 | None | ERR4830353 | Other | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6046802 | Other | lineage4 | None | SRR6046815 | Other | lineage3 | None | SRR6046878 | HR-TB | lineage4 | None | ERR4831638 | Sensitive | None | ERR502470 | RR-TB | lineage4.9 | None | ERR502531 | Other | lineage4.9 | None | ERR4831756 | MDR-TB | lineage2.2.2 | vn | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR502943 | HR-TB | None | SRR7131147 | Other | lineage4.1.2.1 | None | ERR5311077 | RR-TB | La1.8.1 | None | SRR7535086 | Other | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR1063855 | Other | lineage4 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR038289 | Other | lineage4.3.3 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR10796553 | Other | lineage4.9;lineage1.1 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796569 | Other | lineage4.9 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796627 | Other | lineage4 | None | ERR3283032 | HR-TB | None | ERR3283024 | Other | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3283058 | Other | lineage4.9 | None | ERR3283055 | HR-TB | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR349298 | Sensitive | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR3468613 | RR-TB | La1.8.1 | None | ERR349265 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349299 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797043 | HR-TB | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797061 | Other | None | ERR3797046 | HR-TB | None | ERR3797044 | Other | None | ERR400326 | Sensitive | lineage4 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR400320 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR400336 | Sensitive | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4188372 | RR-TB | La1.8.1 | None | ERR4596910 | Sensitive | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769450 | HR-TB | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797313 | HR-TB | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4798431 | HR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR6358951 | HR-TB | lineage4 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4812155 | Sensitive | None | ERR6197023 | MDR-TB | lineage4.7;lineage4.3.4.2 | None | ERR6197038 | HR-TB | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4811030 | Sensitive | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6197021 | MDR-TB | lineage4.7;lineage4.3.4.2 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR736839 | Other | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR9029360 | MDR-TB | lineage2.2.1 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9786523 | Sensitive | lineage4.1.2.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR752229 | Other | lineage4.5 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None |
|---|
