Rv0668 - c.297G>C
Drug resistance types
70 Sensitive
21 RR-TB
43 HR-TB
30 MDR-TB
7 Pre-XDR-TB
1 XDR-TB
124 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.8.1 | 4 |
| lineage4.9 | 119 |
| lineage2.2.1 | 21 |
| lineage4.8.1 | 1 |
| lineage4.3.2.1 | 4 |
| lineage3 | 13 |
| lineage4.8 | 4 |
| La1.7;lineage4.9 | 5 |
| lineage4.1.2.1 | 8 |
| lineage2.2.2 | 4 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.6.1.1 | 2 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| La1.2;La1.8.1 | 1 |
| lineage4.4.1.1 | 5 |
| lineage4.3.4.2.1 | 2 |
| lineage4.1.1.3 | 4 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| lineage4.6.2.2 | 2 |
| lineage4.3.3 | 11 |
| La1.7;lineage4.3.4.1 | 1 |
| La1.2 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| lineage3.1.1 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage2;lineage4 | 1 |
| lineage4 | 7 |
| lineage4.3.4.1 | 3 |
| lineage3;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| M.canetti;lineage4.9 | 5 |
| lineage4.3.4.2;lineage4.7 | 2 |
| 2 | |
| lineage4.2.1 | 4 |
| lineage4.3.4.2 | 2 |
| lineage4.4.1.1.1 | 2 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.2 | 3 |
| lineage4.6.5 | 2 |
| lineage2.2.1.1 | 2 |
| La1.6;La3;lineage4.9 | 2 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.2.2.2 | 2 |
| lineage2.2.1.2;lineage7 | 1 |
| La1.7 | 2 |
| lineage1.1.1 | 1 |
| lineage1.1.2;lineage6.2.3 | 1 |
| lineage4.1.2 | 1 |
| lineage4.1;lineage4.9 | 2 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1.3 | 1 |
| lineage1.1.1;lineage4 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage4.5 | 3 |
| La1;lineage4.9 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage5 | 1 |
| lineage4.3.1 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage5.1.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 296 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1792022 | Other | La1.8.1 | None | ERR369162 | Other | lineage4.9 | None | ERR363449 | Other | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR1181256 | Other | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | ERR9786076 | Other | lineage3 | None | SRR3675292 | Sensitive | lineage4.9 | None | SRR11342669 | Other | lineage4.8 | None | SRR6045832 | Other | lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR4831756 | MDR-TB | lineage2.2.2 | vn | SRR6044942 | HR-TB | lineage4.9 | None | ERR176741 | Other | lineage4.9 | None | ERR2229234 | Sensitive | lineage4.8 | None | ERR3283024 | HR-TB | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR2513405 | Other | lineage2.2.1 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR6358755 | Other | lineage4.6.1.1 | None | SRR3675234 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | ERR4821811 | Sensitive | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR4811030 | Other | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | ERR363498 | Other | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR3801503 | Other | lineage4.6.2.2 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR363490 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR11465802 | Other | La1.7;lineage4.3.4.1 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | SRR7070571 | Sensitive | lineage3 | None | ERR4821276 | Sensitive | lineage3 | None | ERR2693257 | HR-TB | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | ERR4820075 | Other | lineage4.1.2.1 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR373947 | Other | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | ERR2446382 | Other | lineage4 | None | SRR1180446 | Other | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | SRR3675260 | Sensitive | lineage4.9 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | SRR1792011 | Other | La1.8.1 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR6197023 | MDR-TB | lineage4.3.4.2;lineage4.7 | None | SRR6045503 | Other | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR7535086 | Other | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR3675441 | RR-TB | lineage4.9 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR13423649 | Other | lineage2.2.1 | None | SRR1180440 | Other | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR6046046 | Other | lineage4.9 | None | ERR363499 | Other | lineage4.9 | None | ERR363421 | Other | lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | ERR3468613 | Other | La1.8.1 | None | SRR3675265 | Other | lineage4 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR6046878 | Other | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR2510831 | Other | lineage4.3.3 | None | ERR349265 | Other | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR4815909 | Other | lineage4.8 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR3797014 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR2693254 | Other | La1.6;La3;lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR11662694 | Other | lineage4.9 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR1175508 | Sensitive | lineage4.9 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SRR3675580 | Sensitive | lineage4.9 | None | SRR3675477 | Sensitive | lineage4.9 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | ERR2446566 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR11342646 | HR-TB | lineage3 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR6045706 | Other | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR12708384 | Sensitive | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675387 | Other | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR4814396 | Sensitive | lineage4.1.1.3 | None | ERR4830353 | HR-TB | La1.7 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR3283042 | HR-TB | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | SRR14066533 | RR-TB | lineage1.1.1 | None | SRR12708372 | Sensitive | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR11465361 | MDR-TB | lineage4.3.4.1 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR4178226 | Sensitive | lineage4 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | ERR363453 | Other | lineage4.9 | None | ERR3324368 | RR-TB | lineage1.1.2;lineage6.2.3 | None | ERR2229148 | Other | lineage4.8 | dk | ERR10796598 | Other | lineage4.9 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR9786711 | Other | lineage4.6.2.2 | None | ERR4798431 | Other | lineage4.1;lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4769450 | Other | lineage4.9 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR363500 | Other | lineage4.9 | None | ERR4821488 | Sensitive | lineage4.1.3 | None | ERR2509886 | Other | lineage3 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR349300 | Other | lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR2512606 | HR-TB | lineage3 | None | ERR4817998 | Other | lineage3 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | SRR1181403 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR373945 | Other | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR7070223 | HR-TB | lineage3 | None | SRR6046385 | Sensitive | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR3275450 | Other | lineage4 | None | ERR369158 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR7131147 | Other | lineage4.1.2.1 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR038289 | Other | lineage4.3.3 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR9786523 | Sensitive | lineage4.1.2.1 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | ERR2693231 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.9 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR369163 | Other | lineage4.9 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR373946 | Other | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR9029360 | MDR-TB | lineage2.2.1 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR4816548 | HR-TB | lineage4.5 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR4815709 | Sensitive | lineage4.1.2.1 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4811031 | Other | lineage4.5 | None | ERR3283032 | Other | lineage4.9 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | ERR3797043 | Sensitive | lineage4.9 | None | ERR349264 | Other | lineage4.9 | None | SRR1175474 | Other | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | SRR2100067 | Other | lineage4.3.3 | None | SRR3675522 | Other | lineage4.9 | None | ERR5311077 | Other | La1.8.1 | None | ERR6197021 | MDR-TB | lineage4.3.4.2;lineage4.7 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR4816967 | Other | lineage5 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR363502 | Other | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR19295647 | HR-TB | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR3797046 | HR-TB | lineage4.9 | None | SRR3675222 | Other | La1.7 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR369156 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR2517475 | Other | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR1023509 | MDR-TB | lineage4.9 | None | ERR4817915 | Other | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | ERR2513508 | Sensitive | lineage3 | gb | SRR12708371 | HR-TB | lineage4.1.1.3 | None | SRR12708419 | Other | lineage4.3.3 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR363479 | Other | lineage4.9 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR349266 | Other | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR369159 | Other | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR363446 | Other | lineage4.9 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | SRR12708416 | Sensitive | None |
|---|
