Rv3457c - c.339G>C


Drug resistance types
87 Sensitive 8 RR-TB 149 HR-TB 25 MDR-TB 12 Pre-XDR-TB 0 XDR-TB 155 Other
lineage Counts
lineage Count
lineage1.2.1.2.1 1
lineage3 10
157
lineage4.9 60
La1.8.1 5
lineage2.2.1 25
lineage4.5 3
lineage2.2 6
lineage2 3
lineage2.2.1;La3 1
lineage4.1 3
lineage4.6.2.2 4
lineage6.3;lineage4.9;lineage2.1 1
lineage4.1.1.1 1
lineage4.9;lineage4.6.3 1
lineage6.3;lineage2.2.1 1
lineage4 60
lineage4.1.1 3
lineage4.3.4.2.1 2
lineage3;lineage2.1 1
lineage4.1.2.1 30
lineage4.3 1
lineage4.8 6
lineage4.1.1.3 2
lineage4;lineage1.1.2 1
lineage4.1.2 1
lineage5.1.4 1
lineage4.2.1 1
lineage4;lineage1.1 1
lineage4.3.2.1 1
lineage1.1.2 2
lineage1.1 1
lineage4.3.3 6
lineage3.1 4
La2 1
La1 2
lineage6.1.1 2
lineage4.1.3 2
lineage5.1.2 1
lineage1.2.2.2 1
lineage3.1.2 1
La1.2 1
lineage4.3.4.1 2
lineage4.1.2.1.1 1
lineage4.3.2 2
lineage4.8;lineage4.1 2
lineage6.1.3 1
lineage6 1
lineage6.3.1 1
lineage3.1.2.2;lineage3.1.2.1 1
lineage4.6.1.1 1
La3 1
lineage4.4.1.1 1
lineage2.2.1.1 4
lineage1.2.1.2 1
spoligotype Counts
spoligotype Count
None 436
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1510066 Other lineage1.2.1.2.1 None
SRR17658565 Other lineage3 None
SRR1640750 HR-TB None
SRR15368973 Other None
SRR16157123 Other lineage4.9 None
SRR1791696 Other La1.8.1 None
SRR2010299 Pre-XDR-TB lineage2.2.1 None
SRR18213713 HR-TB lineage4.5 None
SRR18910194 HR-TB lineage2.2 None
SRR19303884 HR-TB None
SRR19304036 HR-TB None
SRR20969677 HR-TB lineage2 None
SRR26937071 MDR-TB lineage2.2.1;La3 None
SRR12708416 Sensitive lineage4.1 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR11082350 MDR-TB lineage4.6.2.2 None
SRR23961558 Other lineage6.3;lineage4.9;lineage2.1 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR3675473 Sensitive lineage4.9 None
SRR26159047 Other lineage4.9;lineage4.6.3 None
SRR28119811 Other lineage6.3;lineage2.2.1 None
ERR176751 HR-TB None
SRR3675455 Sensitive lineage4 None
ERR4815604 HR-TB None
SRR3675472 Sensitive lineage4.9 None
SRR3675465 HR-TB None
SRR3675464 HR-TB lineage4.1 None
ERR176793 Other lineage4.1.1 None
SRR3675477 Other lineage4.9 None
ERR4814352 HR-TB lineage2.2.1 None
SRR3675482 HR-TB None
ERR161033 HR-TB None
SRR3675486 HR-TB None
ERR161034 Other lineage4.3.4.2.1 None
SRR3675229 Other lineage4 None
ERR4814536 MDR-TB lineage3;lineage2.1 None
SRR3675210 Sensitive lineage4.9 None
SRR3675221 HR-TB None
SRR3675209 Sensitive lineage4.9 None
SRR3675234 Other None
SRR3675236 HR-TB None
SRR3675232 Other lineage4.1.2.1 None
ERR181824 HR-TB lineage4 None
SRR3675266 Sensitive lineage4.9 None
SRR3675247 Other lineage4.9 None
ERR176568 Other lineage4.3 None
SRR3675265 Other lineage4 None
SRR3675312 HR-TB lineage4 None
SRR3675292 Sensitive lineage4 None
SRR3675311 Other None
SRR3675279 Other None
ERR176643 HR-TB None
SRR3675387 Sensitive None
SRR3675318 Other lineage4.9 None
SRR3675383 HR-TB None
SRR3675514 Sensitive lineage4.9 None
SRR3675510 Other None
ERR176740 HR-TB None
ERR4816113 Sensitive lineage4.1.1 None
ERR4816999 Other None
SRR3675522 Other None
SRR3675527 RR-TB lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
SRR3675547 Other lineage4.9 None
ERR4817060 RR-TB None
SRR3675548 Sensitive lineage4.9 None
ERR4816151 Other lineage4.8 None
SRR3675553 Sensitive lineage4.9 None
ERR212001 HR-TB None
ERR212033 HR-TB None
ERR2027263 Other lineage4 None
SRR3675545 HR-TB None
SRR3675577 Sensitive lineage4.9 None
SRR3675558 HR-TB None
SRR3675572 Other None
ERR4816470 Other lineage3 None
ERR212121 HR-TB None
ERR212138 HR-TB lineage4 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR4816466 HR-TB None
SRR3675571 HR-TB None
SRR3742665 HR-TB None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR4816585 Other lineage2.2 None
ERR4816656 HR-TB None
ERR3275196 Other lineage2.2.1 nl
ERR4817896 HR-TB lineage2.2.1 None
ERR4817998 Other lineage3 None
ERR234659 HR-TB None
ERR4817692 HR-TB lineage4;lineage1.1.2 None
ERR4818021 Other La1.8.1 None
ERR4818347 Other lineage4.1.2 None
ERR2513283 Other lineage5.1.4 None
ERR4818394 Other lineage4.9 None
ERR4818929 HR-TB None
ERR2509673 Other lineage2.2.1 None
ERR2512770 Other lineage4.2.1 None
SRR5007188 Other lineage4 None
ERR4819322 Other lineage4;lineage1.1 None
ERR2513724 Sensitive lineage4.3.2.1 None
SRR5341396 Other lineage4 None
ERR4818615 Other None
ERR4820854 Other lineage4.1.2.1 None
ERR2514125 Other lineage3 None
ERR2515551 Sensitive lineage4.1.2.1 None
SRR5341437 Sensitive lineage4.9 None
ERR2514552 Sensitive lineage3 None
ERR4819781 Other lineage2.2.1 None
SRR5341296 Sensitive lineage4.9 None
ERR2446382 Other lineage4 None
SRR5341302 HR-TB None
ERR2446563 Other lineage2.2.1 nl
SRR5341345 Sensitive lineage4.9 None
SRR5341456 Other None
SRR5341323 Sensitive lineage4 None
SRR5341333 HR-TB None
ERR2693231 Other None
ERR2517475 Other lineage4 None
ERR4821053 Other lineage3 None
SRR5341470 HR-TB None
ERR2693239 HR-TB None
SRR6045706 Sensitive lineage4 None
SRR6045503 HR-TB None
SRR5266542 Pre-XDR-TB lineage2.2.1 ru
ERR4821686 Sensitive lineage4.1.2.1 None
ERR2693230 Other None
ERR2693254 Other None
ERR2693257 Other None
SRR6045555 HR-TB None
SRR6045832 HR-TB lineage4.9 None
SRR6044855 Other lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
SRR6046133 HR-TB None
SRR6045952 HR-TB None
SRR6044890 Other lineage4.9 None
SRR6045002 MDR-TB lineage4.9 None
SRR6045264 Sensitive lineage2.2.1 None
SRR6045233 HR-TB None
ERR2693232 Other lineage4.9 None
SRR6046225 HR-TB None
SRR6045399 Other None
SRR6046066 HR-TB None
SRR6046305 Other lineage4.9 None
SRR6325442 HR-TB None
SRR6046245 Other lineage4.9 None
ERR4829530 Pre-XDR-TB lineage4.8 None
SRR6046397 Other None
SRR6046299 HR-TB None
ERR278594 HR-TB None
SRR6325444 HR-TB None
SRR6046514 HR-TB None
SRR6046594 HR-TB lineage4 None
SRR6046540 HR-TB None
SRR6325447 HR-TB None
SRR6046611 HR-TB lineage4.9 None
SRR6046644 HR-TB None
SRR6325448 HR-TB None
SRR6458423 HR-TB lineage2.2.1 None
SRR6046863 Sensitive lineage1.1.2 None
SRR6046897 Sensitive lineage4 None
SRR6046802 Other lineage4 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR4831638 Sensitive None
SRR6397654 HR-TB lineage4.1.2.1 None
ERR3077978 Other lineage1.1 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR323036 HR-TB None
ERR4831545 Pre-XDR-TB lineage2.2 None
ERR4831546 HR-TB lineage2.2 None
ERR4831739 MDR-TB lineage2.2.1 None
ERR294248 HR-TB None
SRR6896315 Sensitive lineage4.1.2.1 None
SRR6831950 Other lineage4.3.3 None
SRR6789626 Other None
ERR323034 HR-TB lineage3.1 None
ERR5311090 HR-TB None
ERR502524 HR-TB La2 None
SRR7131023 Other lineage4.1.2.1 None
ERR502943 HR-TB None
ERR5311099 HR-TB None
ERR5311081 HR-TB None
SRR7496509 Other None
ERR323041 HR-TB None
SRR7496517 Other None
ERR323038 HR-TB None
SRR9971114 Other lineage2.2.1 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR323039 HR-TB None
ERR323055 HR-TB None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR323053 HR-TB None
ERR323054 HR-TB lineage3.1 None
ERR323063 HR-TB None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR1063862 HR-TB None
ERR1034634 HR-TB None
ERR1035157 Other lineage4.9 None
ERR1063858 HR-TB None
ERR3283017 HR-TB None
ERR3283010 Other La1 None
ERR11049020 Other lineage4.8 None
ERR12015084 Other lineage4.8 None
ERR3283036 HR-TB None
ERR3283024 Other None
ERR3283027 HR-TB None
ERR3283025 HR-TB None
ERR3283032 HR-TB None
ERR3283051 Other lineage4.9 None
ERR3283048 HR-TB lineage4.9 None
ERR3445504 HR-TB None
ERR349265 Sensitive lineage4 None
ERR3445501 HR-TB None
ERR3445502 HR-TB lineage4 None
ERR3468544 HR-TB None
ERR349264 Sensitive lineage4 None
ERR349299 Sensitive lineage4 None
ERR349266 Sensitive lineage4.9 None
ERR349298 Sensitive lineage4 None
ERR349296 Sensitive lineage4 None
ERR349330 Sensitive lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR363421 Sensitive lineage4 None
ERR363437 Sensitive lineage4 None
ERR363426 Sensitive lineage4 None
ERR363446 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363445 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363479 Sensitive lineage4 None
ERR363456 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR363490 Sensitive lineage4 None
ERR363499 Sensitive lineage4 None
ERR363498 Sensitive lineage4 None
ERR363500 Sensitive lineage4 None
ERR363506 Sensitive lineage4 None
ERR363502 Sensitive lineage4 None
ERR369156 Sensitive lineage4.9 None
ERR363509 Sensitive lineage4 None
ERR373945 HR-TB lineage4 None
ERR369157 Sensitive lineage4.9 None
ERR369158 Sensitive lineage4 None
ERR369162 Sensitive lineage4 None
ERR369163 Sensitive lineage4 None
ERR369159 Sensitive lineage4 None
ERR369160 Sensitive lineage4.9 None
ERR3797014 Other None
ERR373946 Sensitive lineage4 None
ERR373947 Sensitive lineage4 None
ERR3797016 HR-TB None
ERR3797023 HR-TB La1.8.1 None
ERR3797017 Other None
ERR3797036 HR-TB None
ERR3797069 Other None
ERR3797058 Other lineage4.9 None
ERR3797060 Other La1.8.1 None
ERR3797061 Other None
ERR3797044 Other None
ERR3797073 HR-TB La1.8.1 None
ERR3804155 Other lineage4.1.2.1 None
ERR3799304 Other lineage6.1.1 None
ERR3797083 HR-TB None
ERR3797086 Other lineage4.9 None
ERR400345 Other lineage4 None
ERR3804169 HR-TB lineage4.1.3 None
ERR400320 Sensitive lineage4 None
ERR400326 Sensitive lineage4 None
ERR400336 Sensitive lineage4 None
ERR4178226 Sensitive lineage4 None
ERR400538 RR-TB lineage5.1.2 None
ERR4188247 HR-TB None
ERR4178309 Other lineage4.1.2.1 None
ERR4797313 HR-TB None
ERR4188350 HR-TB None
ERR4407463 HR-TB None
ERR4796577 MDR-TB None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4407452 Sensitive lineage3 None
ERR473332 Other lineage4 None
ERR4797201 Other lineage1.2.2.2 None
ERR4798139 Sensitive lineage1.1.2 None
ERR4797350 Sensitive lineage4.9 None
ERR4798262 HR-TB La1 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4798431 HR-TB None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4798648 HR-TB lineage3.1.2 None
ERR4799547 Sensitive lineage2.2.1 None
ERR4811030 Sensitive None
ERR4811022 HR-TB None
ERR4800341 Other lineage3 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR4810741 HR-TB None
ERR4811031 Sensitive lineage4.5 None
ERR4812155 Sensitive None
ERR4811105 HR-TB None
ERR4811142 MDR-TB None
ERR5917710 Other lineage4.1.2.1 None
ERR5336148 Other None
ERR5908228 Other lineage4.3.3 None
ERR6358837 HR-TB None
ERR6198317 Other La1.2 None
ERR6326069 Pre-XDR-TB lineage4.3.4.1 None
ERR6865513 Other lineage4.1.2.1 None
ERR6358991 HR-TB None
ERR6359045 HR-TB None
ERR6865502 Sensitive lineage4 None
ERR702404 HR-TB None
ERR736835 HR-TB None
ERR736867 HR-TB None
ERR736839 Other None
ERR736848 HR-TB None
ERR736865 HR-TB None
ERR9117709 HR-TB None
ERR7911670 Pre-XDR-TB lineage2.2 None
ERR736874 HR-TB None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR772255 MDR-TB lineage4.3.2 None
ERR8976043 HR-TB None
ERR9117805 Other lineage4.3.2 None
ERR9786421 Other lineage4.1.2.1 None
ERR9119096 Other lineage4.3.3 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR9634265 Sensitive None
ERR9786384 Sensitive lineage4.1.2.1 None
ERR9786440 Other lineage4.1 None
ERR9786515 Other lineage4.1.2.1 None
ERR9786444 Sensitive lineage4.8 None
ERR9786525 Other lineage4.8;lineage4.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786617 Other lineage4.1.1 None
ERR9786526 Other lineage4.8;lineage4.1 None
ERR9786569 Other lineage4.8 None
ERR9786604 Other None
ERR9786601 Other lineage4.1.2.1 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786627 Other lineage4.1.2.1 None
ERR9787153 Other lineage6.1.3 None
ERR9786671 Other None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR9786694 Other lineage4.1.2.1 None
ERR9786843 Other None
ERR9787014 Other lineage6.1.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR9787165 Other lineage6 None
ERR9787197 Other None
ERR9787139 Other lineage6.3.1 None
ERR987722 HR-TB None
ERR987729 HR-TB lineage3.1.2.2;lineage3.1.2.1 None
ERR9896144 Other lineage3 None
ERR987733 RR-TB lineage4.6.1.1 None
SRR11349186 MDR-TB lineage4.3.3 None
ERR990545 Other lineage3 None
SRR1166821 HR-TB lineage4.1.2.1 None
SRR1162864 HR-TB lineage4.1.2.1 None
SRR1163221 HR-TB lineage4.1.2.1 None
SRR1165506 Other lineage4.1.2.1 None
SRR1165584 Other lineage4.1.2.1 None
SRR1162740 Other lineage4.1.2.1 None
SRR1167055 Other lineage4.1.2.1 None
SRR1169194 Other None
SRR1167384 Other lineage4 None
SRR1172310 HR-TB None
SRR1169249 Other La3 None
SRR1172146 Sensitive lineage4.9 None
SRR1169306 Other None
SRR1172234 Other None
SRR1172728 MDR-TB None
SRR1172817 HR-TB None
SRR1172857 MDR-TB None
SRR1173153 HR-TB None
SRR1172951 Other None
SRR1173118 Other None
SRR1173633 HR-TB lineage4.9 None
SRR1173218 Pre-XDR-TB lineage4.3.3 None
SRR1173330 Pre-XDR-TB lineage4 None
SRR1173363 HR-TB None
SRR1173400 Other None
SRR1173629 Other None
SRR1173706 Other lineage4.9 None
SRR1173778 Other None
SRR1173767 HR-TB lineage4.4.1.1 None
SRR1175496 HR-TB lineage4.9 None
SRR1173788 Other None
SRR1174897 HR-TB None
SRR1175049 RR-TB None
SRR1175074 MDR-TB None
SRR1175500 MDR-TB lineage4 None
SRR1175507 MDR-TB lineage4 None
SRR1181289 Other lineage2.2.1 None
SRR1175508 Other lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
SRR1180172 Other lineage2.2.1 None
SRR1181091 Other lineage2.2.1.1 None
SRR1180137 Other lineage2.2.1 None
SRR1181020 Other lineage2.2.1 None
SRR1184388 Other None
SRR1183106 Other lineage2.2.1.1 None
SRR1183144 Other lineage2.2.1 None
SRR1184381 MDR-TB None
SRR1184380 HR-TB None
SRR1183049 Other lineage2.2 None
SRR1184024 Other lineage2.2.1.1 None
SRR1184294 HR-TB None
SRR1184312 HR-TB lineage2.2.1 None
SRR1184346 HR-TB lineage3.1 None
SRR1196768 MDR-TB None
SRR1196494 MDR-TB None
SRR1196474 HR-TB lineage3.1 None
SRR1196546 HR-TB None
SRR1196566 HR-TB None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR1196677 HR-TB lineage2 None
SRR13423649 Sensitive lineage2.2.1 None
SRR12006550 Other lineage1.2.1.2 None
SRR12142341 HR-TB None
SRR13423544 Other lineage4.5 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR13837504 Sensitive lineage4.9 None
SRR13591342 HR-TB lineage4.1.1.3 None
SRR13861153 Other lineage4.9 None
SRR13861146 Sensitive lineage4.9 None
SRR13861324 Other lineage4.9 None
SRR13861397 HR-TB lineage4.9 None
SRR13861332 Other lineage4.9 None
SRR13861528 HR-TB lineage4.9 None
SRR13861396 HR-TB lineage4.9 None
SRR13861439 RR-TB lineage4.9 None
SRR13861500 RR-TB lineage4.9 None
SRR13861629 RR-TB lineage4.9 None
SRR13861556 Other lineage4.9 None
SRR13861575 Other lineage4.9 None
SRR13861663 Sensitive lineage4.9 None