Rv0668 - c.249C>T
Drug resistance types
128 Sensitive
26 RR-TB
81 HR-TB
12 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
84 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 75 |
| lineage4.1.2 | 1 |
| lineage2.2.1 | 23 |
| lineage4.1.1.3 | 1 |
| lineage4 | 93 |
| 52 | |
| lineage2.2.1.1 | 5 |
| La2 | 1 |
| lineage4.8 | 3 |
| lineage4.3.2.1 | 3 |
| lineage4.3.3 | 2 |
| lineage4.6.1.1 | 3 |
| lineage4.1.2.1 | 10 |
| lineage6.1.1 | 2 |
| lineage5.1.2 | 1 |
| La1.3 | 5 |
| lineage3 | 11 |
| lineage3.1.1 | 2 |
| La1.2 | 1 |
| lineage4.9;La1.3 | 1 |
| lineage3.1.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.5 | 1 |
| lineage4.6.2.2 | 2 |
| lineage6.1.3 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.4.1.1.1 | 2 |
| La1.8.1 | 3 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 3 |
| lineage2 | 1 |
| lineage4.2.1 | 3 |
| La1.7.1 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | 1 |
| lineage4.1.1 | 3 |
| lineage2.1 | 2 |
| lineage3.1 | 1 |
| lineage4;lineage2 | 1 |
| lineage4.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.1.1.3.1 | 2 |
| lineage4.8.2 | 1 |
| lineage1.1.1 | 1 |
| lineage4.9;lineage4.6.2 | 1 |
| lineage1.1.2 | 2 |
| lineage1.2.2.2 | 1 |
| lineage4.9;lineage2.1 | 1 |
| lineage4.7 | 1 |
| lineage4.3.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 340 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR485006 | HR-TB | lineage4.9 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | ERR502510 | Sensitive | lineage4 | None | ERR4831117 | HR-TB | None | ERR4831529 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR294266 | HR-TB | None | ERR502524 | HR-TB | La2 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR7535082 | Sensitive | lineage4 | None | ERR1063859 | HR-TB | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323039 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063862 | HR-TB | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR323053 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR067712 | HR-TB | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063896 | Sensitive | None | ERR1063883 | Sensitive | lineage4 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR108471 | HR-TB | lineage4 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR137286 | Sensitive | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3445504 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR3283055 | HR-TB | None | ERR349299 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR3797081 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797046 | HR-TB | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR4024991 | Other | None | ERR4178226 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4769408 | Other | La1.3 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR473332 | Other | lineage4 | None | ERR4769452 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4769516 | Other | La1.3 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769450 | HR-TB | None | ERR4769552 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4798504 | Other | lineage3 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4798431 | HR-TB | None | ERR4798823 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR4811493 | HR-TB | None | ERR6358979 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR6359069 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6866022 | Other | None | ERR6866639 | Other | None | ERR736831 | HR-TB | lineage4.9 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | ERR736834 | Sensitive | lineage4 | None | ERR736865 | HR-TB | None | ERR751326 | Sensitive | lineage4 | None | ERR752229 | Other | lineage4.5 | None | ERR736835 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR9786597 | Sensitive | lineage4.6.2.2 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR10808399 | Sensitive | lineage4 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173568 | Other | lineage4.9 | None | SRR1173777 | Other | lineage4 | None | SRR1174897 | HR-TB | None | SRR1172717 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181368 | Other | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR17832802 | HR-TB | lineage3 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20970016 | Other | lineage2.2 | None | ERR176778 | HR-TB | None | SRR3675488 | HR-TB | None | ERR176779 | HR-TB | None | ERR4814683 | Sensitive | lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR4815471 | Other | lineage4.9 | None | ERR4814709 | Other | lineage4.1.1 | None | SRR3675222 | Other | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675501 | HR-TB | None | SRR3675246 | Sensitive | lineage4 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675270 | HR-TB | None | SRR3675265 | Other | lineage4 | None | ERR176651 | HR-TB | None | SRR3675292 | Sensitive | lineage4 | None | ERR4815023 | Sensitive | lineage4.9 | None | ERR181887 | HR-TB | None | ERR4816113 | Sensitive | lineage4.1.1 | None | ERR4816964 | Other | lineage4.9 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR176740 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR2027290 | RR-TB | lineage3.1 | None | SRR3675552 | RR-TB | lineage4.9 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR4816300 | Other | lineage4.1.2.1 | None | ERR2513438 | Sensitive | lineage4.1.2.1 | None | ERR212138 | HR-TB | lineage4 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR3675571 | HR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4817998 | Other | lineage3 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4818811 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819073 | Other | lineage4.1.2.1 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5341453 | Sensitive | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR2512606 | MDR-TB | lineage3 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR2509886 | RR-TB | lineage3 | None | ERR4818536 | Other | lineage4.9 | None | ERR4818561 | HR-TB | lineage4 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819357 | Other | lineage4.9 | None | SRR5341425 | Other | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341387 | Other | lineage4 | None | ERR4820284 | Other | lineage4.9 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341408 | Sensitive | lineage3 | None | SRR5341456 | Other | None | SRR5341432 | HR-TB | lineage4 | None | ERR4820746 | RR-TB | lineage3 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | ERR4819933 | Other | lineage4.9 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341319 | Other | lineage3 | None | SRR5341313 | HR-TB | None | ERR4820580 | Sensitive | lineage4.9;lineage4.6.2 | None | SRR5341315 | Sensitive | None | SRR5341310 | Other | lineage1.1.2 | None | ERR2515032 | Other | lineage3 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821007 | RR-TB | lineage1.2.2.2 | None | SRR5341469 | Other | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR5341470 | HR-TB | None | SRR5431730 | Other | La1.8.1 | None | SRR6045503 | HR-TB | None | ERR4821143 | RR-TB | lineage4.9 | None | ERR4821848 | Other | lineage2.2.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR6046117 | RR-TB | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045957 | Other | lineage4.9 | None | SRR6044936 | Other | lineage4 | None | SRR6045053 | Other | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6046046 | Other | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046359 | Other | lineage4.7 | None | SRR6046299 | HR-TB | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046397 | Other | None | SRR6046611 | HR-TB | lineage4.9 | None | ERR4830353 | Other | None | SRR6046492 | Other | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046802 | Other | lineage4 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6046878 | HR-TB | lineage4 | None | SRR6511621 | HR-TB | None | SRR6046897 | Sensitive | lineage4 | None | ERR323037 | HR-TB | lineage4 | None |
|---|
