Rv0668 - c.249C>T


Drug resistance types
73 Sensitive 28 RR-TB 77 HR-TB 42 MDR-TB 4 Pre-XDR-TB 1 XDR-TB 109 Other
lineage Counts
lineage Count
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.9 175
lineage2.2.1 21
lineage4.9;lineage6.3 1
lineage4.8.1 2
lineage4.3.2;lineage4.9 1
La1.7;lineage4.9 8
lineage2.2.2 1
lineage2;lineage4.9 1
La1.7 2
lineage2.2.1.1 5
lineage4.3.1;lineage4.9;lineage6 1
lineage4.8.2;lineage4.9 1
lineage4.4.1.1.1 4
lineage2.2.1;lineage4.9 2
lineage4.2;lineage4.9 3
lineage4.1;lineage4.9 1
lineage5.1.2 1
lineage4.2;lineage4.8.1;lineage4.9 2
lineage1.1.2;lineage4.1.2.1;lineage4.1.3 1
2
lineage4.5 1
lineage4.6.1.1 2
La1.7;M.canetti;lineage4.9 3
lineage4.8;lineage4.9 2
lineage4.3.2.1 3
lineage4 7
lineage4.1.1.3 2
lineage4.1.2 3
lineage4.3.3 2
La3;M.canetti;lineage4.9 1
lineage2.2 2
La1.7;lineage4.9;lineage7 3
lineage4.8.2 1
lineage4.4.1.1 1
lineage6.1.3 1
lineage4.9;lineage9 2
lineage3 7
lineage2.2.1;lineage4 1
La1.8.1 3
lineage3.1.2.2 1
lineage4.3.4.1 1
lineage4.2.1 2
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.6.2.2 2
La1.7;lineage3;lineage4.9;lineage7 1
lineage4.1.2.1 6
M.canetti;lineage4.9;lineage9 1
lineage6.1.1 2
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.3.4.2 1
lineage4.6.3;lineage4.9 1
lineage1.1.1 1
lineage4.1.1.1 3
lineage4.3.4.2.1 4
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.9;lineage6.1.3 1
lineage3.1.2.1;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
lineage2.2.1.2;lineage7 1
La2;lineage4.9;lineage9 1
La1.7.1;lineage4.9 1
La2;lineage4.9 1
lineage4.1.1.3.1;lineage4.9 1
La1;lineage4.9 2
La1.7;lineage4.3.4.1 1
lineage4.8 2
lineage4.9;lineage7 1
lineage3.1;lineage9 1
La1.7.1 1
La1;lineage2;lineage4.9 1
lineage3.1.1 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage1.1.2 1
La1.2;La1.8.1 1
spoligotype Counts
spoligotype Count
None 334
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR176778 HR-TB lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
ERR349299 Other lineage4.9 None
SRR1180996 Other lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
SRR11342653 MDR-TB lineage2.2.1 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
SRR11342693 MDR-TB lineage4.8.1 None
ERR485006 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR3675235 HR-TB lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR176779 HR-TB lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR11342664 MDR-TB lineage2.2.2 None
SRR1180946 Sensitive lineage2;lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
ERR4830353 HR-TB La1.7 None
SRR12416842 HR-TB lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR5007168 Other lineage4.8.2;lineage4.9 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
ERR473332 Other lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR4798431 Other lineage4.1;lineage4.9 None
ERR400538 RR-TB lineage5.1.2 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR502510 HR-TB lineage4.9 None
ERR363500 Other lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
ERR736834 HR-TB lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
SRR3675209 Sensitive lineage4.9 None
SRR5341456 Other lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR4814683 Sensitive lineage1.1.2;lineage4.1.2.1;lineage4.1.3 None
ERR1063896 HR-TB None
ERR752229 Other lineage4.5 None
ERR1199132 Sensitive lineage4.6.1.1 None
SRR1173568 Sensitive lineage4.9 None
ERR4797474 Other lineage4.9 None
SRR6046611 Sensitive lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
ERR373945 Other lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR2513724 Sensitive lineage4.3.2.1 None
ERR4821143 Other lineage4.9 None
ERR369157 Sensitive lineage4.9 None
SRR6046046 Other lineage4.9 None
SRR5341298 Other lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR3675270 Other lineage4.9 None
SRR3675265 Other lineage4 None
SRR6046878 Other lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
SRR6982239 Sensitive lineage4.1.1.3 None
SRR9970980 HR-TB lineage4.1.2 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
SRR1181402 Sensitive lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
ERR867575 Other lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
SRR1180226 HR-TB lineage4.9 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
SRR5007169 RR-TB lineage4.8.2 None
ERR323115 Sensitive lineage4.9 None
ERR369161 Sensitive lineage4.9 None
ERR4818851 RR-TB lineage4.4.1.1 None
ERR4816762 Sensitive lineage4.9 None
ERR9787256 Other lineage6.1.3 None
ERR181887 Other lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR4818561 Sensitive lineage4.9 None
SRR17832802 HR-TB lineage3 None
ERR349265 Other lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
SRR6045347 Other lineage4.9 None
ERR4798823 HR-TB lineage4 None
SRR7236177 Other La1.8.1 None
ERR323066 HR-TB lineage4.9 None
SRR11662694 Other lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR987765 Sensitive lineage4.6.1.1 None
ERR11465801 Other lineage4.3.4.1 None
ERR1063849 HR-TB lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR867570 RR-TB lineage4.9 None
ERR4814639 HR-TB lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR2446566 Other lineage4.9 None
SRR3675585 HR-TB lineage4.9 None
SRR5341387 Other lineage4.9 None
ERR751326 Other lineage4.9 None
ERR867541 MDR-TB lineage4.2.1 None
SRR3675488 Other La1.7;lineage4.9 None
ERR4815471 HR-TB lineage4.9 None
SRR6045706 Other lineage4.9 None
ERR4796254 Other lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
SRR18002967 HR-TB lineage2.2.1 None
SRR1184308 RR-TB lineage4.9 None
SRR10808399 Sensitive lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
ERR363490 Other lineage4.9 None
SRR6044875 Other lineage4.9 None
ERR4819546 HR-TB lineage3 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR1180444 Sensitive lineage4.9 None
SRR3675246 Other lineage4.9 None
SRR6045050 Sensitive lineage4.3.2.1 None
ERR363453 Other lineage4.9 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR5341455 Sensitive lineage4.9 None
ERR363447 Other lineage4.9 None
SRR1158918 Other lineage4.9 None
ERR369156 Sensitive lineage4.9 None
SRR11342647 MDR-TB lineage4.1.1.3 None
ERR373947 Other lineage4.9 None
SRR5341467 Other lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR5341425 Other lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR6865513 Other lineage4.1.2.1 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR1735598 RR-TB lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR502511 HR-TB lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR181824 MDR-TB lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR987722 MDR-TB None
ERR9786597 Other lineage4.6.2.2 None
ERR6358979 HR-TB lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
ERR369162 Other lineage4.9 None
ERR4818710 Sensitive lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
SRR3675385 Other La1.7;lineage4.9 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR1180345 Other lineage4.9 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
ERR4798099 HR-TB lineage4.9 None
ERR363499 Other lineage4.9 None
ERR369158 Other lineage4.9 None
ERR369151 Other lineage4.9 None
ERR9787014 RR-TB lineage6.1.1 None
SRR3675292 Sensitive lineage4.9 None
ERR4769554 RR-TB lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR9786592 Other lineage4.3.4.2 None
ERR4798504 RR-TB lineage3 None
SRR3675501 Other La1.7;lineage4.9 None
ERR363474 Sensitive lineage4.9 None
SRR7535082 Other lineage4.9 None
ERR4596902 MDR-TB lineage3 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR26159047 RR-TB lineage4.6.3;lineage4.9 None
ERR363506 Sensitive lineage4.9 None
ERR4819314 HR-TB lineage1.1.1 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR11465628 Sensitive lineage4.3.4.2.1 None
SRR1735596 RR-TB lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR369163 Other lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR1175487 Sensitive lineage4.9 None
ERR4818536 Other lineage4.9 None
ERR373946 Other lineage4.9 None
SRR11342651 MDR-TB lineage4.1.1.1 None
SRR16156817 Other lineage4.9 None
ERR11466072 Sensitive lineage4.3.4.2.1 None
ERR363426 Sensitive lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR1181349 Sensitive lineage4 None
ERR349330 Sensitive lineage4.9 None
ERR3799304 RR-TB lineage6.1.1 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR124636 HR-TB lineage4.9 None
ERR4769457 Other lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
ERR349264 Other lineage4.9 None
ERR1035122 HR-TB lineage4.9 None
ERR323062 HR-TB lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR363498 Other lineage4.9 None
SRR1181214 Other lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR5431730 Other La1.8.1 None
SRR1183054 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR323037 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR5007161 RR-TB lineage4.1.1.3.1;lineage4.9 None
ERR3797081 Sensitive lineage4.9 None
ERR736831 Other lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR867567 RR-TB lineage3 None
ERR4819462 Sensitive lineage4.9 None
ERR6359069 HR-TB lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR11465802 Other La1.7;lineage4.3.4.1 None
ERR363502 Other lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
ERR4178226 Sensitive lineage4 None
SRR19303820 RR-TB lineage4.8 None
SRR1175512 Sensitive lineage4.9 None
SRR11342658 RR-TB lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR4797184 HR-TB lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
SRR3675222 Other La1.7 None
SRR1180413 Sensitive lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR1180172 RR-TB lineage2.2.1 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR1183144 RR-TB lineage2.2.1 None
SRR1175506 Sensitive lineage4.9 None
ERR363479 Other lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR11342655 MDR-TB lineage2.2.1 None
SRR6045503 Other lineage4.9 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR349266 Other lineage4.9 None
SRR5341319 Other lineage3 None
ERR369159 Other lineage4.9 None
ERR363446 Other lineage4.9 None
SRR6045359 HR-TB lineage4.9 None
SRR6045053 Other lineage4 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR349300 Other lineage4.9 None
ERR137286 Other lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR4816113 Sensitive lineage4.1.1.1 None
SRR5341373 Other lineage4.9 None
ERR363449 Other lineage4.9 None
SRR11342662 MDR-TB lineage4.8.1 None
ERR4817998 Other lineage3 None
ERR176651 Other lineage4.9 None
ERR4822261 RR-TB lineage2.2.1 None
ERR4819357 Sensitive lineage4.9 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR18002941 RR-TB lineage2.2.1 None
SRR10808668 Other lineage2.2.1 None
ERR363421 Other lineage4.9 None
ERR702405 HR-TB lineage4.9 None
SRR6046492 Other lineage4.9 None
ERR4816964 HR-TB lineage4.9 None
SRR1159378 Other lineage4.9 None
ERR349296 Sensitive lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR1791747 Other La1.8.1 None
ERR6866639 HR-TB lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
SRR3675492 Other La1.7;lineage4.9 None
SRR10315466 RR-TB lineage2.2.1 None
ERR4178309 Other lineage4.1.2.1 None
SRR5341400 Sensitive lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR1172310 MDR-TB lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR2027257 Other lineage4.1.2.1 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR18003047 MDR-TB lineage2.2.1 None
ERR4799547 HR-TB lineage2.2.1 None
SRR1184021 Sensitive lineage4.9 None
ERR067712 Sensitive lineage4.9 None
SRR11342682 Other lineage4.1.2 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
ERR4596904 MDR-TB lineage3.1.1 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR4818624 Other lineage4.3.4.2.1 None
SRR1181351 Sensitive lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
SRR6046593 Other lineage4.9 None
SRR5341310 Other lineage1.1.2 None
ERR6865502 Sensitive lineage4 None
SRR6046897 Sensitive lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
SRR1180312 Sensitive lineage4.9 None