Rv3596c - c.1539G>A
Drug resistance types
35 Sensitive
2 RR-TB
5 HR-TB
2 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
30 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 45 |
| La1.7;lineage4.9 | 5 |
| lineage2.1;lineage4.9 | 1 |
| lineage4 | 3 |
| lineage4.1.2.1 | 3 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.9;lineage7 | 4 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage3 | 2 |
| lineage4.1.1.3 | 1 |
| lineage4.4.2 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| La1.7 | 1 |
| lineage2.2.1 | 3 |
| lineage2.1;lineage4.9;lineage7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 75 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR369162 | Other | lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR387051 | Other | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR363502 | Other | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR363453 | Sensitive | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR4817998 | Other | lineage3 | None | ERR369163 | Sensitive | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | ERR736848 | Other | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR3675280 | RR-TB | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR363500 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR363490 | Sensitive | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | ERR4830353 | Other | La1.7 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | ERR6865502 | Sensitive | lineage4 | None | SRR3675582 | Other | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | SRR29050859 | Other | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | SRR6045503 | Sensitive | lineage4.9 | None |
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