Rv0668 - c.330G>T
Drug resistance types
104 Sensitive
59 RR-TB
25 HR-TB
30 MDR-TB
17 Pre-XDR-TB
0 XDR-TB
99 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 55 |
| lineage2.2.1 | 17 |
| lineage3 | 23 |
| lineage2.2.1.1 | 3 |
| lineage4.6.2.2 | 3 |
| La1.7.1 | 1 |
| lineage4 | 72 |
| lineage4.1 | 5 |
| lineage4.8 | 12 |
| lineage4.4.2 | 1 |
| lineage1.2.2 | 1 |
| lineage4.3.4.2.1 | 5 |
| lineage3.1.2 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage2.2 | 4 |
| lineage5.1.4 | 2 |
| lineage4.1.2.1 | 19 |
| lineage1.1.3.1 | 4 |
| 28 | |
| lineage1.2.1.1 | 1 |
| lineage1.1.2 | 2 |
| lineage4.3.3 | 8 |
| lineage4.1.1 | 3 |
| lineage4.3.4.2 | 4 |
| lineage3.1.1 | 2 |
| lineage5 | 1 |
| lineage1.1.3 | 1 |
| lineage3.1 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.1.2 | 2 |
| lineage3.1.2.1 | 2 |
| lineage2.2.2 | 1 |
| lineage1.1.1 | 1 |
| lineage4.5 | 2 |
| lineage6 | 1 |
| lineage1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.2.1 | 3 |
| lineage4.1.1.3.1 | 2 |
| lineage4.4.1.1 | 7 |
| lineage4.3.2.1 | 4 |
| lineage1.2.2.2 | 2 |
| lineage4.3.4.1 | 3 |
| lineage4.1.3 | 1 |
| lineage2.1 | 2 |
| lineage4.1.1.3 | 3 |
| lineage5.1.1 | 1 |
| lineage4.3 | 1 |
| La1.8.1 | 3 |
| lineage4.9;La1.3 | 1 |
| La1.3 | 3 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage4.7;lineage4.3.4.2 | 1 |
| lineage4.6.5 | 2 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| La1.6 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 334 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR19295647 | Sensitive | lineage4.9 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR19303773 | Other | lineage4.6.2.2 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR3675455 | Sensitive | lineage4 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR4815301 | Other | lineage4.4.2 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | SRR3675477 | Other | lineage4.9 | None | ERR4815298 | Other | lineage4.3.4.2.1 | None | ERR4815777 | Other | lineage4.9 | None | ERR4814312 | Other | lineage4 | None | ERR4814356 | Pre-XDR-TB | lineage3.1.2 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR4815684 | Other | lineage5.1.4 | gb | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR4815709 | Sensitive | lineage4.1.2.1 | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4814656 | Other | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR3275450 | Other | lineage4 | None | SRR3675230 | RR-TB | lineage3 | None | SRR3675229 | Other | lineage4 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR4814748 | Other | lineage4.8 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | ERR4815502 | Other | lineage4.1 | None | ERR4814841 | Other | lineage4.1 | None | SRR3675265 | Other | lineage4 | None | ERR4814874 | MDR-TB | lineage1.1.2 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4814878 | Sensitive | lineage4.8 | None | ERR4815556 | RR-TB | lineage3 | None | SRR3675279 | Other | None | ERR4814911 | Other | lineage4.3.3 | None | ERR4814932 | Other | lineage4.1.1 | None | SRR3675292 | Sensitive | lineage4 | None | ERR4814986 | Other | lineage4.3.4.2 | None | SRR3675318 | Other | lineage4.9 | None | SRR3675387 | Sensitive | None | SRR3675522 | Other | None | ERR4816944 | RR-TB | lineage2.2 | None | ERR4815901 | Other | lineage2.2 | None | ERR4815910 | Other | lineage4.1.2.1 | None | ERR4817464 | Other | lineage3.1.1 | None | ERR4816969 | Other | lineage4.8 | None | ERR4815909 | Other | lineage4.8 | None | ERR4816967 | RR-TB | lineage5 | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR4816982 | Other | lineage4 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR4816093 | Other | lineage1.1.3 | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816183 | Other | None | ERR4816300 | Other | lineage4.1.2.1 | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4817060 | RR-TB | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | ERR4817069 | RR-TB | None | ERR4816531 | Other | lineage4.1.2 | None | ERR4816476 | Other | lineage3.1.2.1 | None | ERR4816417 | Other | lineage4.9 | None | ERR4816466 | HR-TB | None | ERR4817131 | Pre-XDR-TB | None | ERR4816425 | Other | lineage2.2.2 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817703 | Other | lineage1.1.1 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4816831 | Other | lineage4.1.2.1 | None | ERR4817998 | Other | lineage3 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR4817874 | Other | lineage3 | None | ERR4819017 | RR-TB | lineage3 | None | ERR4818787 | MDR-TB | lineage6 | None | ERR4818126 | RR-TB | lineage1 | None | ERR2513438 | Sensitive | lineage4.1.2.1 | None | ERR4818173 | Other | lineage2.2.1 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR2509886 | RR-TB | lineage3 | None | ERR2512606 | MDR-TB | lineage3 | None | ERR4818393 | RR-TB | lineage3 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR4817584 | MDR-TB | lineage3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007170 | RR-TB | lineage4.9 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR2513508 | Sensitive | lineage3 | gb | ERR4818977 | RR-TB | lineage4.1.2.1 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR4819093 | Other | lineage4.3.3 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR4819217 | Other | lineage1.2.2.2 | None | ERR4820265 | Other | lineage4.1.2.1 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4819307 | RR-TB | lineage4 | None | SRR5341396 | Other | lineage4 | None | ERR4819305 | RR-TB | lineage4.9 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR4820324 | Other | lineage4 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819456 | Other | lineage4.8 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR2514552 | Sensitive | lineage3 | None | ERR2514514 | RR-TB | lineage3 | gb | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR2514655 | Sensitive | lineage3 | None | ERR2446382 | Other | lineage4 | None | ERR1023509 | Other | None | ERR4820833 | HR-TB | None | ERR4819948 | Other | lineage4.4.1.1 | None | SRR5341323 | Sensitive | lineage4 | None | ERR4820030 | Other | lineage4.9 | None | ERR4821791 | HR-TB | lineage4.1.2.1 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR4820107 | RR-TB | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR2517475 | Other | lineage4 | None | ERR4820959 | Other | lineage4.1.2.1 | None | SRR6045503 | HR-TB | None | ERR4821057 | HR-TB | lineage4 | None | ERR4821007 | RR-TB | lineage1.2.2.2 | None | ERR4821214 | RR-TB | None | ERR4821176 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821334 | RR-TB | lineage4.1.3 | None | ERR4821409 | Other | lineage4.8 | None | ERR4821341 | Other | lineage4.3.4.1 | None | ERR4821417 | Other | lineage1.1.3.1 | None | ERR4822104 | RR-TB | lineage3 | None | ERR4822105 | Other | lineage4.1 | None | ERR4821492 | HR-TB | lineage3 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4822224 | HR-TB | lineage4.2.1 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR4821572 | Other | lineage2.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821679 | Other | lineage4.3.3 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6044936 | Other | lineage4 | None | SRR6045892 | Sensitive | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045957 | Other | lineage4.9 | None | SRR6045158 | Other | lineage4.9 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045289 | Other | None | SRR6046245 | Other | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | SRR6046802 | Other | lineage4 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6046815 | Other | lineage3 | None | SRR6832644 | Other | lineage4.3.3 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR4831997 | MDR-TB | lineage2.1 | None | ERR4831638 | Sensitive | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR5311077 | RR-TB | La1.8.1 | None | ERR502943 | HR-TB | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR323107 | Other | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796589 | Other | lineage4.9 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796627 | Other | lineage4 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR323115 | Sensitive | lineage4 | None | ERR3468613 | RR-TB | La1.8.1 | None | ERR349265 | Sensitive | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR363474 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR363499 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4769555 | Other | La1.3 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769495 | Other | La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797313 | HR-TB | None | ERR4798431 | HR-TB | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None | ERR6358979 | Other | None | ERR6197021 | MDR-TB | lineage4.7;lineage4.3.4.2 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6866410 | Sensitive | None | ERR7801175 | RR-TB | lineage4.6.5 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1062928 | RR-TB | lineage4 | None | SRR10808805 | Sensitive | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR10993951 | RR-TB | La1.6 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1140736 | RR-TB | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR11444077 | Sensitive | lineage4.6.2.2 | None | SRR1173587 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1172816 | MDR-TB | lineage4.3.3 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1180252 | Other | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR1173740 | Other | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1181161 | Other | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR14801749 | Sensitive | None |
|---|
