Rv1630 - c.429G>C


Drug resistance types
97 Sensitive 98 RR-TB 78 HR-TB 138 MDR-TB 17 Pre-XDR-TB 1 XDR-TB 158 Other
lineage Counts
lineage Count
lineage2.2.1 39
La1.6;lineage4 1
lineage4.9 207
La3;M.canetti;lineage4.9 2
lineage4.4.1.2 3
La3;lineage4.9 9
La1;lineage4.9 3
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage4.1.1.1 3
lineage2.1;lineage4.9 5
lineage4.8.1 2
lineage3 10
lineage4.3.3 9
lineage4.3.4 1
lineage2.1;lineage2.2;lineage6.3 1
lineage4.4.1.1.1 4
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
La2;lineage2.2 1
M.canetti;lineage2.1;lineage4.9 24
lineage4.8 35
La1.7;lineage4.9 11
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
lineage4.1.2.1 16
lineage2.2;lineage4 1
La1.7;lineage4.9;lineage7 3
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La2;lineage4.9 1
lineage4.3.2.1 6
La3;M.canetti;lineage2.1;lineage4.9 12
lineage2.2.1;lineage4 2
lineage4.4.2 1
La1.7;M.canetti;lineage4.9 4
lineage4 6
lineage4.3.4.1 2
La1.8.1 6
lineage4.5 2
lineage4.6.1.2 2
lineage2.1;lineage4.9;lineage6.3 2
lineage3.1.2;lineage4.1.1.3.1 1
M.canetti;lineage4.3.1;lineage4.9 1
lineage2.2.2 6
La1.2.BCG;lineage4.9 1
lineage2.2.1;lineage4.5 1
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage4.2.1 4
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
lineage4.8;lineage4.9 1
lineage4.1.1.3.1;lineage4.9 1
La1.7 2
La1.7;lineage4.3.4.1 1
lineage3.1.1 1
lineage4.1.1.3 5
4
lineage1.1.2 3
lineage2.2 1
lineage4.6.4 2
lineage4.1.1.3.1 3
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage4.6.2.2 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.7.1 2
lineage2.2.1.2 1
lineage4.2.2.2 2
lineage1.1.1 1
M.canetti;lineage4.9 2
lineage4.1.2 3
La1;lineage2;lineage4.9 1
lineage4.3.4.2.1 3
lineage4.9;lineage6.1.3 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage1;lineage4.9 1
lineage1.2.2.2 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
La1.3 2
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
La1.7.1;lineage4.9 1
lineage4.2.2.1 1
lineage4.1.2.1.1 1
La1;lineage4.1.2 1
lineage4.9;lineage7 1
M.canetti;lineage2.1 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage5.1.2 1
lineage4.2;lineage4.8.1;lineage4.9 2
lineage1.1.2;lineage4 1
lineage4.1.1.2 1
lineage4.2;lineage4.9 2
M.canetti;lineage2.1;lineage4 1
lineage4.4.1.1 2
La1.2.BCG 3
La3;M.canetti;lineage2.1;lineage3.1 1
lineage4.9.1 2
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
lineage4.6.5 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage3.1.2.1 1
lineage3.1.3 1
lineage4.3 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
M.canetti;lineage2.2 1
La1.2;La1.8.1 1
La1.7;lineage3.1;lineage4 1
La1.7.1;La1.7.X-unk4 1
M.canetti;lineage1 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage3;lineage4 1
lineage2;lineage4.9 1
M.canetti;lineage2.1;lineage6.3 1
lineage2.2.1.1 4
lineage4.3.1;lineage4.9;lineage6 1
lineage4.8.2;lineage4.9 1
La1.2 1
lineage2.1;lineage4.3.2 1
lineage2.2.1;lineage4.9 2
La1.7;lineage3;lineage4.9;lineage7 1
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1;lineage3 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;lineage4 1
lineage1.1.2;lineage4.1.2.1;lineage4.1.3 1
lineage4.1;lineage4.9 1
La1.4 1
lineage1.2.1.2.1 1
lineage2;lineage4 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
M.canetti;lineage4.9;lineage9 1
lineage6.1.2 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage1.1 1
lineage4.7 1
spoligotype Counts
spoligotype Count
None 587
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR28351584 HR-TB lineage2.2.1 None
SRR28351554 Other La1.6;lineage4 None
ERR349300 Other lineage4.9 None
ERR6866807 RR-TB lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR4816852 Other lineage4.9 None
SRR6397733 Other lineage4.4.1.2 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4816113 Sensitive lineage4.1.1.1 None
ERR4808964 RR-TB lineage2.2.1 None
ERR176766 MDR-TB lineage2.1;lineage4.9 None
SRR5341373 Other lineage4.9 None
ERR363449 Other lineage4.9 None
SRR11342662 MDR-TB lineage4.8.1 None
ERR4817998 Other lineage3 None
ERR176651 Other lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
SRR11342649 MDR-TB lineage4.3.3 None
ERR4819357 Sensitive lineage4.9 None
SRR3675507 RR-TB lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR4769493 Other lineage4.9 None
SRR13423649 Other lineage2.2.1 None
ERR6359070 Sensitive lineage4.9 None
ERR369158 Other lineage4.9 None
ERR369151 Other lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR3797079 Sensitive lineage4.9 None
SRR3675322 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR3675292 Sensitive lineage4.9 None
ERR349296 Sensitive lineage4.9 None
SRR16156804 Sensitive lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675482 RR-TB lineage4.9 None
SAMEA3501073 RR-TB lineage4.8 None
SRR3675501 Other La1.7;lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3797015 HR-TB lineage4.9 None
ERR4816322 Other lineage4.9 None
SRR1163221 MDR-TB lineage4.1.2.1 None
ERR3283031 Other La3;lineage4.9 None
ERR176741 Other lineage4.9 None
ERR978757 RR-TB lineage4.8 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR736848 Other lineage4.9 None
ERR926157 Other lineage4.9 None
SRR16156832 RR-TB lineage2.2;lineage4 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR6045555 Other lineage4.9 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR13861381 HR-TB lineage4.9 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
ERR181887 Other lineage4.9 None
ERR978750_ERR978752_ERR978751 RR-TB lineage4.8 None
ERR3283016 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR12708415 HR-TB lineage2.2.1 None
SRR11342651 MDR-TB lineage4.1.1.1 None
SRR1181351 Sensitive lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR978765 RR-TB lineage4.8 None
SRR20969542 Other lineage4.4.2 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR1181349 Sensitive lineage4 None
ERR6326069 Pre-XDR-TB lineage4.3.4.1 None
ERR3797019 Other La1.8.1 None
ERR2513438 Sensitive lineage4.1.2.1 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4816548 HR-TB lineage4.5 None
ERR5917985 MDR-TB lineage2.2.1 None
SRR3675486 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR2514430 Other lineage3.1.2;lineage4.1.1.3.1 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR3797063 Other La3;lineage4.9 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
SRR1915481 Other La1.2.BCG;lineage4.9 None
SRR7496471 Sensitive lineage4 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1063849 HR-TB lineage4.9 None
ERR4811035 Pre-XDR-TB lineage2.2.1;lineage4.5 None
ERR502478 RR-TB lineage4.9 None
SRR11342653 MDR-TB lineage2.2.1 None
ERR4796351 Sensitive lineage4.9 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR349264 Other lineage4.9 None
SRR1172807 Sensitive lineage4.9 None
ERR323036 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR4814639 HR-TB lineage4.9 None
SRR069989 HR-TB lineage2.2.2 None
ERR485006 HR-TB lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR2446566 Other lineage4.9 None
SRR5709967 MDR-TB lineage2.2.1 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR867541 MDR-TB lineage4.2.1 None
SAMEA3501063 RR-TB lineage4.8 None
ERR4769474 HR-TB lineage4.9 None
SRR6045706 Other lineage4.9 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1175513 Sensitive lineage4.9 None
ERR2228890 Other lineage4.8;lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR5007161 RR-TB lineage4.1.1.3.1;lineage4.9 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR3797081 Sensitive lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
ERR3283014 Other La3;lineage4.9 None
SRR10809074 HR-TB lineage4.9 None
SRR1173281 Other lineage3 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR363490 Other lineage4.9 None
ERR4830353 HR-TB La1.7 None
ERR363445 Other lineage4.9 None
ERR3797062 RR-TB lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR11465802 Other La1.7;lineage4.3.4.1 None
SAMEA3501067 RR-TB lineage4.8 None
SRR6044815 RR-TB lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
ERR3275215 RR-TB lineage4.1.2.1 nl
SRR11342696 MDR-TB lineage4.4.1.1.1 None
SRR6044876 Sensitive lineage4.9 None
SRR5341293 Sensitive lineage4.9 None
ERR978752 Other lineage4.8 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR16156775 Other lineage4.9 None
SRR9971046 MDR-TB lineage4.8 None
SRR1180391 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR12708392 Other lineage2.2.1 None
SRR3675494 RR-TB lineage4.9 None
SRR11342647 MDR-TB lineage4.1.1.3 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR373947 Other lineage4.9 None
SRR1640750 RR-TB None
SAMEA3501065 RR-TB lineage4.8 None
ERR245675 Sensitive lineage1.1.2 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR9971114 Other lineage2.2.1 None
SRR3675385 Other La1.7;lineage4.9 None
ERR978746_ERR978747_ERR978748 RR-TB lineage4.8 None
ERR4810624 MDR-TB lineage2.2 None
ERR9119508 MDR-TB lineage4.6.4 None
SRR069978 HR-TB lineage2.2.2 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR5341330 Other lineage4.9 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
ERR2513724 Sensitive lineage4.3.2.1 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR369157 Sensitive lineage4.9 None
ERR363499 Other lineage4.9 None
SRR1167055 Other lineage4.1.2.1 None
ERR2446118 RR-TB lineage4.1.2.1 nl
ERR4816964 HR-TB lineage4.9 None
ERR9786528 Sensitive lineage4.6.2.2 None
ERR978694_ERR978693 Other lineage4.8 None
SRR16156697 RR-TB lineage2.2.1 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797065 RR-TB lineage4.9 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR5162090 RR-TB lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
SRR1792478 HR-TB La1.7.1 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR926165 Other lineage4.9 None
SRR6045832 Other lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR363474 Sensitive lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR4178309 Other lineage4.1.2.1 None
ERR978726 RR-TB lineage4.8 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR926156 Other lineage4.9 None
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SAMEA3501015 Other lineage4.8 None
SRR5341400 Sensitive lineage4.9 None
ERR2693228 RR-TB lineage4.9 None
ERR363506 Sensitive lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR4819314 HR-TB lineage1.1.1 None
SRR3675487 MDR-TB M.canetti;lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
ERR067712 Sensitive lineage4.9 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR3675444 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR11342682 Other lineage4.1.2 None
ERR978761_ERR978762_ERR978760 RR-TB lineage4.8 None
ERR5311089 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
ERR4816762 Sensitive lineage4.9 None
ERR4818536 Other lineage4.9 None
SRR3675506 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797023 MDR-TB La1.8.1 None
SRR5818647 Other lineage4.3.4.2.1 None
ERR4818561 Sensitive lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR349265 Other lineage4.9 None
SRR6045002 RR-TB lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR400345 Other lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR4821655 HR-TB lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR349330 Sensitive lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR11342636 MDR-TB lineage4.3.3 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR176778 HR-TB lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
SRR3675267 Other La1.7;lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR926160 Other lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR3283032 Other lineage4.9 None
ERR502473 RR-TB lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR12708411 HR-TB lineage1.2.2.2 None
ERR4816551 MDR-TB lineage4.1.1.3 None
SRR9971270 RR-TB lineage2.2.1 None
SRR10808805 Other La1;lineage4.9 None
ERR5917710 RR-TB lineage4.1.2.1 None
ERR867570 RR-TB lineage4.9 None
SRR14801652 HR-TB lineage4.3.3 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR363498 Other lineage4.9 None
SRR6046210 Other lineage4.9 None
ERR926163 Other lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
ERR4769495 Other La1.3 None
ERR2229143 RR-TB lineage4.9 None
ERR176779 HR-TB lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
ERR4815471 HR-TB lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
ERR4769436 Other La1.3 None
SRR1180250 Other lineage4.9 None
SRR5341267 Pre-XDR-TB lineage3 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR926159 Sensitive lineage4.9 None
SRR11342664 MDR-TB lineage2.2.2 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR502474 RR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR16149129 MDR-TB lineage4.2.2.1 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3468544 RR-TB lineage2.1;lineage4.9 None
ERR736831 Other lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR867540 MDR-TB lineage2.2.1 None
ERR8665994 RR-TB lineage4.9 None
SRR10315556 Sensitive lineage2.2.1 None
ERR3797064 Other La3;lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
ERR6359069 HR-TB lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR363502 Other lineage4.9 None
ERR2512423 Other lineage4.1.1.3 None
SRR1180444 Sensitive lineage4.9 None
ERR4178226 Sensitive lineage4 None
SRR6045050 Sensitive lineage4.3.2.1 None
SRR21677886 Sensitive lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR19303820 RR-TB lineage4.8 None
SRR11342658 RR-TB lineage4.1.2 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR18003042 Other lineage2.2.1 None
ERR363447 Other lineage4.9 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
ERR3283040 HR-TB lineage4.9 None
ERR978734_ERR978733_ERR978735 RR-TB lineage4.8 None
ERR978746 RR-TB lineage4.8 None
SRR1165423 RR-TB lineage4.1.2.1 None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
ERR400538 RR-TB lineage5.1.2 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
ERR502470 RR-TB lineage4.9 None
SRR11349186 MDR-TB lineage4.3.3 None
SRR1180413 Sensitive lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR11465511 Other lineage4.3.4.2.1 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR9992879 XDR-TB lineage4.3.3 None
ERR5908228 RR-TB lineage4.3.3 None
SRR18289200 Other lineage4.9 None
ERR4817069 RR-TB None
ERR4796577 HR-TB None
SRR28351408 Pre-XDR-TB lineage2.2.1;lineage4 None
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9786444 Sensitive lineage4.8 None
SRR1180406 Sensitive lineage4.9 None
SRR10315558 RR-TB lineage2.2.1 None
ERR369162 Other lineage4.9 None
ERR4818710 Sensitive lineage4.9 None
SRR6044952 Other lineage4.9 None
ERR4817692 MDR-TB lineage1.1.2;lineage4 None
SRR6046611 Sensitive lineage4.9 None
ERR978733 RR-TB lineage4.8 None
SRR13861510 Other lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
ERR373945 Other lineage4.9 None
ERR2514327 HR-TB lineage4.8 None
ERR4818252 HR-TB lineage4.1.1.2 None
SRR20632814 Sensitive lineage4.9 None
SRR1165506 Other lineage4.1.2.1 None
SRR1180345 Other lineage4.9 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR1173453 Other lineage4.4.1.1 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
ERR363421 Other lineage4.9 None
ERR3797067 Other La1.8.1 None
SRR1049582 MDR-TB lineage4.6.1.2 None
ERR502481 RR-TB lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR6046839 Other lineage4.9 None
SRR1915479 Other La1.2.BCG None
SRR3675265 Other lineage4 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR245758 Other lineage4.9.1 None
SRR11462861 Other La1.8.1 None
SRR9970980 HR-TB lineage4.1.2 None
ERR4821053 RR-TB lineage3 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR3675558 MDR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
ERR7801175 HR-TB lineage4.6.5 None
SRR13861176 Other lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR7801176 RR-TB lineage4.6.5 None
SRR3675561 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4769433 RR-TB lineage4.9 None
ERR4596902 MDR-TB lineage3 None
ERR4800102 Sensitive lineage3.1.2.1 None
ERR2513259 Other lineage3 None
ERR926154 Sensitive lineage4.9 None
SRR18913742 Sensitive lineage3.1.3 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
ERR3275941 RR-TB lineage4.3 nl
SRR1735596 RR-TB lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR1791696 RR-TB La1.8.1 None
SRR3675269 RR-TB lineage4.9 None
SRR10869071 MDR-TB lineage2.2.1 None
ERR369163 Other lineage4.9 None
SRR3601585 Pre-XDR-TB lineage2.2.1 None
ERR4872102 MDR-TB lineage4.6.4 None
SRR3675545 RR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9119669 MDR-TB lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR369161 Sensitive lineage4.9 None
ERR978735 Other lineage4.8 None
ERR323047 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR323060 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR373946 Other lineage4.9 None
ERR9786164 RR-TB lineage4.1.1.3 None
ERR4769521 RR-TB lineage4.9 None
ERR978755_ERR978756_ERR978754_ERR978757 RR-TB lineage4.8 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6865502 Sensitive lineage4 None
SRR6046897 Sensitive lineage4.9 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR7240033 Other La1.2;La1.8.1 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR1180312 Sensitive lineage4.9 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR6045219 HR-TB lineage4.9 None
ERR926158 Sensitive lineage4.9 None
SRR16156188 Sensitive lineage4.9 None
ERR4816470 HR-TB lineage3 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR3675580 Sensitive lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR349299 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR323058 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR1166821 RR-TB lineage4.1.2.1 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
SRR11342693 MDR-TB lineage4.8.1 None
ERR1063862 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR6045371 Other lineage4.9 None
SRR1173740 Other lineage3;lineage4 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR4814976 Other lineage4.9 None
SRR6397815 Other lineage4.4.1.1 None
ERR405209 Sensitive La1.7;lineage4.9 None
SRR6046376 Other lineage3 None
SRR1183054 Sensitive lineage4.9 None
ERR323107 HR-TB lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
ERR323037 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR978767 RR-TB lineage4.8 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR12708396 MDR-TB lineage4.3.2.1 None
SRR13423544 Other lineage4.5 None
SRR6046863 Sensitive lineage1.1.2 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR978766 RR-TB lineage4.8 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
SRR1181091 Other lineage2.2.1.1 None
SRR6044875 Other lineage4.9 None
ERR4819546 HR-TB lineage3 None
ERR4769444 HR-TB lineage4.9 None
ERR926164 Other lineage4.9 None
ERR2228900 Other lineage4.8 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR5007168 Other lineage4.8.2;lineage4.9 None
ERR4769418 Other La1.2 None
SRR7236330 Other La1.8.1 None
ERR126597 HR-TB lineage4.4.1.2 None
ERR3797047 MDR-TB lineage4.9 None
ERR363453 Other lineage4.9 None
ERR473332 Other lineage4.9 None
ERR11466062 Sensitive lineage4.9.1 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR1162864 MDR-TB lineage4.1.2.1 None
SRR1175512 Sensitive lineage4.9 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SRR3675450 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
SRR3675222 Other La1.7 None
ERR369156 Sensitive lineage4.9 None
SRR13861333 Sensitive lineage4.9 None
ERR978750 RR-TB lineage4.8 None
ERR5311094 HR-TB lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR21732954 Sensitive lineage4.9 None
ERR2509673 Other lineage2.2.1 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675515 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SAMEA3501070 RR-TB lineage4.8 None
SRR1238558 Other lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR3675243 MDR-TB lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
ERR5311083 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR6865513 Other lineage4.1.2.1 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR473314 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR926155 Other lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
ERR363479 Other lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
SRR1735598 RR-TB lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR1180410 Sensitive lineage4.9 None
ERR978760 RR-TB lineage4.8 None
SRR5341456 Other lineage4.9 None
SAMEA3501052 RR-TB lineage4.8 None
SRR3675568 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3283028 Other La3;lineage4 None
SRR7070157 Other lineage4.1.1.3.1 None
SAMEA3501046 RR-TB lineage4.8 None
ERR971389 Other lineage4.9 None
ERR4814683 Sensitive lineage1.1.2;lineage4.1.2.1;lineage4.1.3 None
ERR4798431 Other lineage4.1;lineage4.9 None
SRR6044835 Other lineage4.9 None
SAMN02414850 Other lineage4.1.2.1 None
ERR3468607 RR-TB lineage4.9 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR13861332 Other lineage4.9 None
SRR1915485 Other La1.2.BCG None
SRR9971122 MDR-TB lineage4.8 None
ERR4188350 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045191 Sensitive lineage4.9 None
SRR16278274 Other La1.4 None
ERR212125 HR-TB lineage4.9 None
SRR1510066 RR-TB lineage1.2.1.2.1 None
ERR363500 Other lineage4.9 None
ERR978726_ERR978727 RR-TB lineage4.8 None
ERR1023509 MDR-TB lineage4.9 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR6045952 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR12708419 Other lineage4.3.3 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR1034634 HR-TB lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
SRR6046485 Other lineage4.9 None
ERR3283006 RR-TB lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR11342655 MDR-TB lineage2.2.1 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR6045503 Other lineage4.9 None
ERR349266 Other lineage4.9 None
ERR473334 HR-TB lineage4.9 None
SRR1165584 Other lineage4.1.2.1 None
ERR323038 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR369159 Other lineage4.9 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR108125 RR-TB lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR6045359 HR-TB lineage4.9 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9787030 RR-TB lineage6.1.2 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR1180172 RR-TB lineage2.2.1 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR3275196 RR-TB lineage2.2.1 nl
SRR1183144 RR-TB lineage2.2.1 None
ERR867525 Pre-XDR-TB lineage2.2.1 None
SRR7240492 MDR-TB La1.7.1 None
SRR1915487 Other La1.2.BCG None
SRR18002947 MDR-TB lineage2.2.1 None
ERR978754 RR-TB lineage4.8 None
ERR4800527 MDR-TB lineage2.2.1 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
SRR3675209 Sensitive lineage4.9 None
SRR7496523 Other lineage4.7 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR9119096 RR-TB lineage4.3.3 None
ERR736856 HR-TB lineage4.9 None
ERR181824 MDR-TB lineage4.9 None
ERR363446 Other lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR363456 Sensitive lineage4.9 None
SRR8692887 Other None