Rv3596c - c.648C>T


Drug resistance types
131 Sensitive 20 RR-TB 65 HR-TB 17 MDR-TB 13 Pre-XDR-TB 0 XDR-TB 59 Other
lineage Counts
lineage Count
43
lineage4.6.1.1 2
lineage2.2.1 17
lineage4.4.1.1;lineage4.1.2.1 1
lineage4 70
lineage4.9 79
lineage4.4.1.1.1 2
lineage4.3.3 3
lineage4.9;lineage4.2.1 2
lineage3 5
lineage2 1
lineage4.9;lineage2.2 1
lineage2.2 4
lineage2.2.2 1
lineage1.1.3.1 1
lineage1.1.2 3
lineage2.2.1.1 1
lineage3.1 2
lineage4.4.2 1
lineage7;lineage2.2.1.2 1
lineage4.8 26
La1.7.1 1
lineage4;lineage2.2 1
lineage3.1.2 1
lineage4.1.1.3 5
lineage4.3.4.2.1 2
lineage4.9;lineage3.1.1 1
lineage2.1 1
lineage4.1 1
lineage4.1.1 2
lineage4;lineage2 1
lineage4.1.2.1 6
lineage4.1.1.2 1
lineage1.1.1.1 1
La1.8.1 2
lineage4.9;lineage2.1 1
lineage4.2.1 2
lineage4.3.2 1
lineage4.9;lineage2 1
lineage4.1.2 1
La1 1
lineage5.1.2 1
lineage1.2.2.2 1
lineage3.1.2.1 1
lineage1.2.1.2.1 2
lineage4.5 1
spoligotype Counts
spoligotype Count
None 305
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR10808805 Sensitive None
ERR987765 Sensitive lineage4.6.1.1 None
SRR10315556 Sensitive lineage2.2.1 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR10809074 Sensitive lineage4 None
SRR1173385 Sensitive lineage4.9 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR1172717 Other lineage4.9 None
SRR11349186 MDR-TB lineage4.3.3 None
SRR1166181 MDR-TB lineage4 None
SRR1168955 MDR-TB lineage4.9;lineage4.2.1 None
SRR1172807 Sensitive lineage4.9 None
SRR1173281 RR-TB lineage3 None
SRR1173515 HR-TB lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR1173740 Other None
SRR1175513 Other lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180413 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1181214 Other lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181368 Other lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1181283 Sensitive lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR1184308 Sensitive lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
SRR1196545 HR-TB lineage4.9 None
SRR11972171 RR-TB lineage2.2.2 None
SRR11972166 Sensitive lineage1.1.3.1 None
SRR11972169 HR-TB lineage2.2 None
SRR11972332 HR-TB lineage2.2.1 None
SRR11972222 Sensitive lineage1.1.2 None
SRR11972328 MDR-TB lineage2.2.1.1 None
SRR11972458 Sensitive lineage1.1.2 None
SRR11972344 Sensitive lineage2.2.1 None
SRR11972462 Sensitive lineage2.2.1 None
SRR15316488 Sensitive lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
SRR14088361 MDR-TB lineage3.1 None
SRR14782405 HR-TB None
SRR16156804 RR-TB lineage4.9 None
SRR15316595 RR-TB lineage4.4.2 None
SRR16156188 HR-TB lineage4.9 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR8692812 Other lineage4.9 None
SRR18572454 RR-TB lineage4.9 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR19303820 RR-TB lineage4.8 None
SRR22424765 MDR-TB lineage4 None
SRR22424787 Sensitive lineage4.9 None
SRR18003024 RR-TB lineage2.2.1 None
SRR18391668 Other La1.7.1 None
SRR8692879 HR-TB lineage4.9 None
SRR8692800 Other lineage4 None
SRR8692905 HR-TB None
SRR8692863 Other lineage4;lineage2.2 None
SRR8692887 Other None
SRR8692791 Other lineage4.9 None
SRR8692899 Other lineage4.9 None
ERR4814356 Pre-XDR-TB lineage3.1.2 None
SRR3085281 Pre-XDR-TB lineage2.2.1 None
ERR4815627 Other lineage4.1.1.3 gb
ERR161034 Other lineage4.3.4.2.1 None
SRR3675209 Sensitive lineage4.9 None
SRR3675265 Other lineage4 None
ERR171142 Other lineage4.9;lineage3.1.1 None
ERR702405 Sensitive lineage2.1 None
ERR1750929 Sensitive lineage4.1.1.3 za
ERR4815502 Other lineage4.1 None
ERR4815471 Other lineage4.9 None
SRR3675270 HR-TB None
SRR3675292 Sensitive lineage4 None
ERR4815550 Other lineage4 None
ERR176675 Sensitive lineage4.3.4.2.1 None
ERR176740 HR-TB None
ERR2229741 Sensitive lineage4.8 None
ERR1950022 Sensitive lineage4.8 None
ERR4815909 Other lineage4.8 None
ERR4816964 Other lineage4.9 None
ERR2229076 Other lineage4 None
ERR2229054 Sensitive lineage4.8 None
ERR2229563 Sensitive lineage4.8 None
ERR1950025 Sensitive lineage4.8 dk
SRR3675538 Other lineage4.8 None
ERR2229091 Sensitive lineage4.8 None
ERR4816113 Sensitive lineage4.1.1 None
ERR2027290 RR-TB lineage3.1 None
ERR2229578 Sensitive lineage4 None
ERR2229574 Sensitive lineage4.8 None
ERR212001 HR-TB None
ERR2229171 Sensitive lineage4 None
ERR2229169 HR-TB lineage4.8 None
ERR2229107 Sensitive lineage4 None
ERR212034 HR-TB None
ERR2229138 Other lineage4 None
ERR2229762 HR-TB lineage4.8 None
ERR2229198 MDR-TB lineage4.8 None
ERR2229234 RR-TB lineage4.8 None
ERR2229228 HR-TB lineage4.8 None
ERR2229608 HR-TB lineage4.8 None
ERR216965 HR-TB lineage4.9 None
ERR2229314 Sensitive lineage4.8 None
ERR2229791 RR-TB lineage4.9 None
ERR2229340 Sensitive lineage4.8 None
ERR2229690 Other lineage4.8 None
ERR4816729 Sensitive lineage4.9 None
ERR2229403 Sensitive lineage4.8 None
ERR2229408 Sensitive lineage4.8 dk
ERR2245275 Sensitive lineage4.9 None
ERR2229421 Sensitive lineage4.8 dk
ERR2229462 Other lineage4.8 None
ERR4816762 Other lineage4;lineage2 None
ERR4816847 Sensitive lineage4.1.1 gb
ERR4816904 Sensitive lineage4.1.2.1 None
ERR4818252 Other lineage4.1.1.2 None
ERR2229521 Sensitive lineage4.8 None
ERR2510682 Pre-XDR-TB lineage2.2.1 it
ERR4817998 Other lineage3 None
ERR2513109 Sensitive lineage3 None
ERR2513438 Sensitive lineage4.1.2.1 None
ERR2229726 Sensitive lineage4.8 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR4818710 Sensitive lineage4.9 None
ERR4818811 Pre-XDR-TB lineage2.2.1 None
ERR4818186 Other lineage4 None
SRR5007204 Other lineage4.1.2.1 None
ERR4818522 Pre-XDR-TB lineage3 None
ERR4818536 Other lineage4.9 None
ERR4819357 Other lineage4.9 None
SRR5153091 HR-TB lineage4.3.3 None
ERR1023509 Other None
ERR4819607 Other lineage3 None
ERR4819462 Other lineage4 None
ERR2514197 RR-TB lineage1.1.1.1 None
ERR4819863 RR-TB lineage4.9 None
SRR5341330 HR-TB None
ERR4819933 Other lineage4.9 None
SRR5431730 Other La1.8.1 None
SRR5341456 Other None
ERR2693238 HR-TB lineage4.9 None
ERR502511 Sensitive lineage4.9;lineage2.1 None
SRR6045503 HR-TB None
ERR4821143 RR-TB lineage4.9 None
ERR4821747 MDR-TB lineage4.9;lineage4.2.1 None
SRR5535715 HR-TB lineage2.2.1 None
ERR2660539 Other lineage4.9 None
ERR4821620 Sensitive lineage4.1.1.3 None
SRR6046133 HR-TB None
SRR6045555 HR-TB None
SRR6045706 Sensitive lineage4 None
SRR6045795 HR-TB lineage2.2.1 None
SRR6044875 HR-TB lineage4.9 None
SRR6046046 Other None
SRR6045053 Other None
SRR6045233 HR-TB None
SRR6045217 Other lineage4 None
SRR6045371 Sensitive lineage4.2.1 None
SRR6046259 Sensitive lineage4.9 None
SRR6046492 Other None
SRR6046299 HR-TB None
SRR6046385 Other lineage4.9 None
ERR2851356 Sensitive lineage4.9 None
SRR6046594 HR-TB lineage4 None
ERR4831117 HR-TB None
SRR6046802 Other lineage4 None
SRR6046611 HR-TB lineage4.9 None
SRR6046878 HR-TB lineage4 None
SRR6046897 Sensitive lineage4 None
SRR6280272 Sensitive lineage2.2.1 cn
ERR502470 RR-TB lineage4.9 None
ERR502473 Pre-XDR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
ERR502474 Pre-XDR-TB lineage4.9 None
ERR502479 RR-TB lineage4.9 None
ERR4972584 MDR-TB lineage4.3.2 None
ERR502481 Pre-XDR-TB lineage4.9 None
ERR501639 Sensitive lineage4.9;lineage2 None
SRR7535082 Sensitive lineage4 None
ERR502510 Sensitive lineage4 None
SRR6785157 Sensitive lineage4.2.1 None
SRR6982141 RR-TB lineage4.3.3 None
SRR6982239 HR-TB lineage4.1.1.3 None
SRR9970978 Sensitive lineage4.1.2 None
ERR3283010 Other La1 None
ERR067699 HR-TB lineage4 None
ERR1023502 MDR-TB lineage2.2.1 None
ERR1199132 Sensitive lineage4.6.1.1 None
ERR133825 Sensitive lineage4 None
ERR3273109 MDR-TB lineage4 None
ERR1034647 MDR-TB lineage4.1.1.3 None
ERR108471 HR-TB lineage4 None
ERR3283014 HR-TB None
ERR3283055 HR-TB None
ERR3283025 HR-TB None
ERR3283028 Other None
ERR3283031 HR-TB None
ERR3283047 HR-TB None
ERR3439265 Other lineage4.9 None
ERR3283057 HR-TB lineage4 None
ERR3445504 HR-TB None
ERR3445501 HR-TB None
ERR3445502 HR-TB lineage4 None
ERR349296 Sensitive lineage4 None
ERR3468488 RR-TB La1.8.1 None
ERR349264 Sensitive lineage4 None
ERR349265 Sensitive lineage4 None
ERR349266 Sensitive lineage4.9 None
ERR349298 Sensitive lineage4 None
ERR349299 Sensitive lineage4 None
ERR349330 Sensitive lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR363421 Sensitive lineage4 None
ERR363445 Sensitive lineage4 None
ERR363446 Sensitive lineage4 None
ERR363426 Sensitive lineage4 None
ERR363437 Sensitive lineage4 None
ERR363500 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR363479 Sensitive lineage4 None
ERR363499 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363456 Sensitive lineage4 None
ERR363498 Sensitive lineage4 None
ERR363490 Sensitive lineage4 None
ERR363509 Sensitive lineage4 None
ERR363502 Sensitive lineage4 None
ERR363506 Sensitive lineage4 None
ERR369160 Sensitive lineage4.9 None
ERR369158 Sensitive lineage4 None
ERR369159 Sensitive lineage4 None
ERR3797046 HR-TB None
ERR373945 HR-TB lineage4 None
ERR373946 Sensitive lineage4 None
ERR373947 Sensitive lineage4 None
ERR369162 Sensitive lineage4 None
ERR369163 Sensitive lineage4 None
ERR3797063 HR-TB None
ERR3797048 HR-TB None
ERR3797065 MDR-TB lineage4 None
ERR3797036 HR-TB None
ERR3797079 Sensitive lineage4 None
ERR4178309 Other lineage4.1.2.1 None
ERR3797086 Other lineage4.9 None
ERR3797087 Sensitive lineage4 None
ERR400538 RR-TB lineage5.1.2 None
ERR3797064 Sensitive None
ERR3797081 Sensitive lineage4 None
ERR4178226 Sensitive lineage4 None
ERR4596910 Sensitive lineage4 None
ERR4769554 RR-TB lineage4.9 None
ERR473303 Sensitive lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769452 HR-TB None
ERR4769450 HR-TB None
ERR4769474 HR-TB lineage4 None
ERR473334 HR-TB lineage4.9 None
ERR4797285 MDR-TB lineage1.2.2.2 None
ERR4797193 HR-TB lineage1.1.2 None
ERR4796929 Sensitive lineage4 None
ERR4798898 MDR-TB lineage3.1.2.1 None
ERR4797474 Other None
ERR4798431 HR-TB None
ERR4799513 HR-TB lineage2.2 None
ERR4799025 Pre-XDR-TB None
ERR4799171 Pre-XDR-TB lineage4.8 None
ERR4810624 HR-TB lineage2.2 None
ERR4799547 Sensitive lineage2.2.1 None
ERR4811493 HR-TB None
ERR6336807 HR-TB lineage1.2.1.2.1 None
ERR6336712 Sensitive lineage1.2.1.2.1 None
ERR6336765 HR-TB None
ERR6336744 HR-TB None
ERR6865502 Sensitive lineage4 None
ERR6359070 Other lineage4.9 None
ERR6359066 HR-TB lineage4 None
ERR6359069 Other lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
ERR752229 Other lineage4.5 None
ERR736837 Other lineage4.9 None
ERR751326 Sensitive lineage4 None
ERR9119669 HR-TB None