EBG00000313339 - n.2108A>T
Drug resistance types
74 Sensitive
20 RR-TB
5 HR-TB
24 MDR-TB
9 Pre-XDR-TB
1 XDR-TB
88 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 26 |
| lineage4.9 | 88 |
| lineage4.1.1.3 | 1 |
| lineage5.1.2 | 1 |
| lineage4.1.1.1 | 2 |
| 2 | |
| lineage4.3.4.2.1 | 5 |
| lineage4.2.1.1 | 2 |
| lineage3 | 10 |
| lineage4.4.1.1 | 3 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage4.1.2.1 | 12 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.2.1 | 5 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.8 | 10 |
| lineage4.5 | 1 |
| lineage3.1.1;lineage4 | 1 |
| lineage4.1.1.2 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage6.3.1 | 1 |
| lineage2.2.2 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4 | 3 |
| lineage2.2.1;lineage4 | 1 |
| lineage3.1.2.1 | 2 |
| lineage4.1.1.3.1 | 4 |
| lineage4.3 | 2 |
| lineage2.2.1.1 | 2 |
| lineage4.1;lineage4.9 | 2 |
| lineage6.1.3 | 1 |
| lineage4.3.2.1 | 3 |
| lineage3;lineage4 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage1.1.1;lineage4 | 1 |
| lineage4.4.2 | 1 |
| lineage4.8.1 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage5.1.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage1.1.3.3 | 1 |
| lineage4.3.2 | 2 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage4.7 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.4.1.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage3.1.1 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.3.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 221 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR10796553 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR400538 | RR-TB | lineage5.1.2 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | SRR12708416 | Sensitive | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR4817069 | RR-TB | None | SRR11349207 | RR-TB | lineage2.2.1 | None | ERR369159 | Sensitive | lineage4.9 | None | SRR11342646 | HR-TB | lineage3 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | SRR1173281 | Other | lineage3 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR2600574 | MDR-TB | lineage2.2.1 | None | SRR6045503 | Sensitive | lineage4.9 | None | SRR1140736 | Other | lineage4.1.2.1 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR10796591 | Other | lineage4.9 | None | SRR6045952 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | ERR2517074 | Pre-XDR-TB | lineage3 | gb | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | ERR369162 | Other | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR6046275 | Other | lineage3.1.1;lineage4 | None | SRR7069473 | Other | lineage4.1.1.2 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR10796622 | Other | lineage4.8 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR4818440 | Other | lineage6.3.1 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR369163 | Sensitive | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | SRR6046440 | Other | lineage3.1.2.2 | None | ERR363498 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR18002933 | Other | lineage2.2.1 | None | ERR4815022 | Other | lineage3.1.2.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR7131229 | Other | lineage4.1.2.1 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796589 | Other | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR4178309 | Other | lineage4.1.2.1 | None | SRR3675537 | Sensitive | lineage4.9 | None | ERR9907760 | Pre-XDR-TB | lineage4.3 | None | ERR983238 | MDR-TB | lineage2.2.1.1 | None | ERR363490 | Sensitive | lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR7069687 | Other | lineage4.1.1.3.1 | None | ERR867567 | RR-TB | lineage3 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | ERR349265 | Other | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR10796624 | Other | lineage4.8 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR349299 | Other | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341323 | Sensitive | lineage4.9 | None | SRR6045496 | Other | lineage6.1.3 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR6045928 | Other | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR4814905 | Sensitive | lineage4.8 | gb | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR1023509 | Other | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | ERR4820484 | Sensitive | lineage4.8 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR18002964 | Other | lineage2.2.1 | None | ERR363447 | Other | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | SRR7069783 | Other | lineage4.1.2.1 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR13423546 | Other | lineage4.4.2 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR6044952 | Other | lineage4.9 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR7131061 | Other | lineage2.2.1 | None | ERR363500 | Sensitive | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR10796560 | Other | lineage4.9 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | ERR363453 | Sensitive | lineage4.9 | None | ERR4817998 | Other | lineage3 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | ERR369158 | Other | lineage4.9 | None | SRR3675580 | Sensitive | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR1173719 | Other | lineage4.9 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | ERR751345 | Other | lineage5.1.1 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675292 | Sensitive | lineage4.9 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR6397640 | Other | lineage4.2.1.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR867569 | Other | lineage4.9 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR7070251 | Sensitive | lineage4.1.1.3.1 | None | ERR373945 | Sensitive | lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR6865502 | Sensitive | lineage4 | None | SRR15276982 | XDR-TB | lineage3 | None | ERR10796573 | Other | lineage4.8 | None | SRR11662694 | Other | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | SRR1175508 | Sensitive | lineage4.9 | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR19303876 | Other | lineage4.7 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | ERR10796595 | Other | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR3283032 | Other | lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None | SRR19303960 | Sensitive | lineage4.4.1.2 | None | ERR2600422 | MDR-TB | lineage2.2.1 | None | ERR4812155 | Other | lineage4.9 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR369160 | Sensitive | lineage4.9 | None | SRR6046250 | Other | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | ERR349266 | Sensitive | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR9971168 | Other | lineage4.3.2.1 | None | ERR10796566 | Other | lineage4.9 | None | SRR1062918 | Other | lineage3 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR19303899 | Other | lineage3 | None | SRR7070157 | Other | lineage4.1.1.3.1 | None | SRR7131216 | Other | lineage4.1.2.1 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | SRR1173310 | Other | lineage3.1.1 | None | ERR10796592 | Other | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR4818904 | Other | lineage4.8 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR2600577 | Pre-XDR-TB | lineage2.2.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR2600576 | Pre-XDR-TB | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR5865106 | MDR-TB | lineage4.2.1 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR10796621 | Other | lineage4.8 | None | SRR18002963 | Other | lineage2.2.1 | None | ERR363479 | Sensitive | lineage4.9 | None | SRR5153833 | Other | lineage2.2.1 | None | SRR7070535 | HR-TB | lineage4.1.2.1 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR19304104 | Other | lineage4.8 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR4821769 | Other | lineage4.1.2.1 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None |
|---|
