Rv1630 - c.297G>T
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
79 Sensitive
9 RR-TB
15 HR-TB
6 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
35 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 91 |
| lineage4.8 | 4 |
| lineage2.2.1.2 | 1 |
| lineage2.2.1 | 5 |
| lineage4.9;lineage7 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage2.2.1.1 | 2 |
| lineage4.2;lineage4.9 | 3 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 2 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| La3;lineage4.9 | 5 |
| lineage5.1.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4 | 4 |
| lineage4.1.2 | 1 |
| La1.7.1 | 1 |
| lineage3 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.3.3 | 1 |
| lineage4.8.1 | 1 |
| lineage4.9.1 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage1.1.2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 144 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR212138 | HR-TB | lineage4.9 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR18549032 | HR-TB | lineage2.2.1.2 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR1023509 | Other | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR363447 | Other | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | ERR363500 | Sensitive | lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR1184021 | Sensitive | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR363437 | Sensitive | lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR400538 | RR-TB | lineage5.1.2 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR6865513 | Other | lineage4.1.2.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | SRR6046802 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR1181349 | Sensitive | lineage4 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR21469201 | Other | La1.7.1 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR4817998 | Other | lineage3 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR1175512 | Sensitive | lineage4.9 | None | ERR176751 | Other | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1183144 | Other | lineage2.2.1 | None | ERR212033 | Other | lineage4.9 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1165628 | Other | La3;lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | SRR1169249 | Other | lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | ERR363474 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | SRR1183054 | Sensitive | lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | ERR176643 | Other | La3;lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | ERR11252612 | Other | La3;lineage4.9 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | ERR4816762 | Sensitive | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | ERR369163 | Sensitive | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR3675292 | Sensitive | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR363490 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR349299 | Other | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None |
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