Rv1630 - c.834G>A
Drug resistance types
68 Sensitive
6 RR-TB
105 HR-TB
18 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
84 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 8 |
| lineage4.2.2 | 1 |
| 93 | |
| lineage2.2.1 | 21 |
| lineage4.1.2.1 | 17 |
| lineage1.1.2 | 3 |
| lineage4 | 45 |
| lineage4.9 | 43 |
| lineage4.2.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage1.1 | 1 |
| lineage4.6.4 | 2 |
| lineage4.2.1.1 | 1 |
| lineage5.2 | 2 |
| lineage4.3.2.1 | 1 |
| lineage3.1 | 2 |
| La2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.7 | 1 |
| lineage4.1.2.1;lineage2.2.1 | 1 |
| lineage4.3.4 | 1 |
| La1.8.1 | 2 |
| lineage5.1.2 | 1 |
| lineage6.1.1 | 2 |
| La1.3 | 2 |
| lineage1.2.2.2 | 1 |
| lineage3.1.2 | 1 |
| lineage2.2 | 2 |
| lineage4.3.3 | 3 |
| lineage4.3.4.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage2.2.2 | 2 |
| lineage2 | 2 |
| La3 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.5 | 1 |
| La1.7.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage2.1 | 2 |
| lineage9;lineage3.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage4.8 | 2 |
| lineage4.1 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4.3 | 1 |
| lineage4.1.1 | 2 |
| lineage4.1.1.3 | 1 |
| lineage4;lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 291 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR4820318 | Other | lineage4.2.2 | None | SRR5341470 | HR-TB | None | ERR1035138 | MDR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR2515228 | Other | lineage2.2.1 | None | SRR5341418 | Other | None | SAMN02414850 | Other | lineage4.1.2.1 | None | ERR2514929 | HR-TB | lineage1.1.2 | None | ERR2446563 | Other | lineage2.2.1 | nl | ERR2693231 | Other | None | ERR2693239 | HR-TB | None | ERR4821053 | Other | lineage3 | None | ERR2693254 | Other | None | ERR2693230 | Other | None | ERR2693257 | Other | None | SRR6045503 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | ERR278594 | HR-TB | None | SRR6044890 | Other | lineage4.9 | None | SRR6046152 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6325442 | HR-TB | None | ERR2693232 | Other | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046362 | HR-TB | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6325444 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046802 | Other | lineage4 | None | SRR6046514 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046644 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6046824 | HR-TB | None | SRR6046897 | Sensitive | lineage4 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR3077978 | Other | lineage1.1 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR4872102 | MDR-TB | lineage4.6.4 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR6982458 | Sensitive | lineage4.3.2.1 | None | SRR6832249 | Other | lineage2.2.1 | None | ERR294248 | HR-TB | None | ERR323036 | HR-TB | None | SRR6832787 | RR-TB | lineage2.2.1 | None | SRR6982365 | Other | lineage2.2.1 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR502524 | HR-TB | La2 | None | ERR502889 | Other | None | ERR323039 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311090 | HR-TB | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR8217918 | HR-TB | None | SRR7496471 | Sensitive | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR5311099 | HR-TB | None | SRR7496523 | Other | lineage4.7 | None | ERR323038 | HR-TB | None | ERR323055 | HR-TB | None | ERR323041 | HR-TB | None | ERR323053 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR11488822 | Pre-XDR-TB | lineage4.1.2.1;lineage2.2.1 | None | ERR067681 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1034634 | HR-TB | None | ERR1034652 | Other | None | ERR3283040 | HR-TB | None | ERR133986 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3283024 | Other | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR10796631 | Other | lineage4.3.4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283025 | HR-TB | None | ERR3439432 | Other | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR3468544 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797061 | Other | None | ERR3797016 | HR-TB | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797044 | Other | None | ERR3797015 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797083 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797082 | Other | lineage4.9 | None | ERR3797086 | Other | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR403298 | HR-TB | lineage4 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4769551 | Other | La1.3 | None | ERR4188350 | HR-TB | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4769552 | Other | La1.3 | None | ERR4798431 | HR-TB | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4798406 | HR-TB | None | ERR4798504 | Other | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4810741 | HR-TB | None | ERR5908228 | Other | lineage4.3.3 | None | ERR6358837 | HR-TB | None | ERR6326069 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6865502 | Sensitive | lineage4 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR736865 | HR-TB | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR9119508 | MDR-TB | lineage4.6.4 | None | ERR7821126 | Sensitive | lineage1.1.3.2 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR9119096 | Other | lineage4.3.3 | None | ERR8976043 | HR-TB | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9787014 | Other | lineage6.1.1 | None | SRR1162740 | Other | lineage4.1.2.1 | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR069981 | HR-TB | lineage2.2.2 | None | SRR069989 | HR-TB | lineage2 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR069978 | Pre-XDR-TB | lineage2.2.2 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1169306 | Other | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1173384 | Other | lineage4 | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1173118 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173629 | Other | None | SRR1175074 | MDR-TB | None | SRR1173706 | Other | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1173778 | Other | None | SRR1183145 | Other | lineage2.2.1 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR1196494 | MDR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR13423544 | Other | lineage4.5 | None | SRR13861322 | Other | lineage4.9 | None | SRR13861326 | Other | lineage4.9 | None | SRR13861386 | HR-TB | lineage4.9 | None | SRR13861413 | Sensitive | lineage4.9 | None | SRR13861510 | Other | lineage4.9 | None | SRR1791696 | Other | La1.8.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184372 | MDR-TB | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR13837498 | Sensitive | lineage4.9 | None | SRR13837599 | Sensitive | lineage4.9 | None | SRR13837722 | Sensitive | lineage4.9 | None | SRR13838003 | Sensitive | lineage4.9 | None | SRR13861163 | Sensitive | lineage4.9 | None | SRR13861235 | HR-TB | lineage4.9 | None | SRR13861261 | Sensitive | lineage4.9 | None | SRR13861381 | MDR-TB | lineage4.9 | None | SRR13861400 | Other | lineage4.9 | None | SRR13861484 | RR-TB | lineage4.9 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR13861568 | Other | lineage4.9 | None | SRR13861646 | Other | lineage4.9 | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR1640750 | HR-TB | None | SRR1710057 | Other | lineage2.1 | None | SRR17658572 | Sensitive | lineage1.1.2 | None | SRR17658565 | Other | lineage3 | None | SRR17832802 | HR-TB | lineage3 | None | SRR20632814 | Sensitive | lineage4 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | SRR25827771 | Pre-XDR-TB | lineage4.2.2.2 | None | SRR26159043 | Other | lineage4.9 | None | SRR21732980 | Other | lineage4.3.3 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR28119823 | Sensitive | lineage4.9 | None | SRR25827330 | MDR-TB | lineage4.8 | None | SRR6325445 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR158583 | HR-TB | None | ERR1035239 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675482 | HR-TB | None | SRR3416776 | Other | lineage2.1 | None | SRR3675486 | HR-TB | None | ERR1750908 | Sensitive | lineage4 | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675234 | Other | None | ERR176568 | Other | lineage4.3 | None | SRR3675265 | Other | lineage4 | None | ERR176643 | HR-TB | None | SRR3675292 | Sensitive | lineage4 | None | ERR176740 | HR-TB | None | SRR3675383 | HR-TB | None | ERR176751 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3675550 | Other | None | ERR212033 | HR-TB | None | SRR3675502 | Other | None | ERR4816113 | Sensitive | lineage4.1.1 | None | ERR4816151 | Other | lineage4.8 | None | SRR3675545 | HR-TB | None | SRR3675558 | HR-TB | None | ERR4816470 | Other | lineage3 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR234659 | HR-TB | None | ERR4817998 | Other | lineage3 | None | ERR2513438 | Sensitive | lineage4.1.2.1 | None | ERR1035162 | Other | None | ERR4818811 | Pre-XDR-TB | lineage2.2.1 | None | ERR2229143 | Other | lineage4.1.1 | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR2513259 | Other | lineage3 | None | ERR2509673 | Other | lineage2.2.1 | None |
|---|
