Rv0668 - c.1500C>T


Drug resistance types
96 Sensitive 12 RR-TB 102 HR-TB 20 MDR-TB 7 Pre-XDR-TB 0 XDR-TB 138 Other
lineage Counts
lineage Count
lineage4.1;lineage4.9 2
lineage4.9 203
lineage3;lineage4.9 1
lineage5.1.4 1
La3;lineage4 1
La1.7;lineage4.9 11
lineage4 7
4
La1;lineage4.9 5
lineage2.2.1 21
lineage4.4.1.1.1 2
lineage4.3.2.1 3
lineage4.1.2.1 8
lineage3 12
La3;lineage4.9 8
lineage1.1.1 1
lineage2.2;lineage4.9 1
lineage4.8 4
La3;lineage2.1;lineage4.9;lineage6.3 2
lineage2.1 2
lineage2.2.1;lineage4 2
La1.8.1 4
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage1;lineage4.9 1
lineage4.5 1
lineage4.4.1.1 1
lineage4.3.3 5
lineage4.3.3;lineage4.9 1
lineage4.4.1.2 1
La1;lineage4.1.2 1
lineage4.6.2.2 3
lineage2.2.1;lineage4.9 1
La1.7;M.canetti;lineage4.9 2
lineage4.7 1
M.canetti;lineage4.9;lineage9 1
lineage1.1.3.1 1
La1.7;lineage4.9;lineage6 1
lineage4.1.1.1 1
lineage4.1.1.2 1
La1.2 2
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage4.1.2 1
lineage4.3.4.2.1 3
La1.7;lineage4.9;lineage7 2
lineage4.2.1 2
lineage6.1.3 1
lineage4.9;lineage6.1.3 1
lineage4.3.4.1 2
M.canetti;lineage1 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage1.1.2 2
La1.7;lineage4.3.4.1 1
lineage5.1.2 1
La1.7;lineage3;lineage4.9;lineage7 1
lineage4.8;lineage4.9 2
lineage1.1.1;lineage4 1
lineage4.1.1.3;lineage4.9 2
lineage4.1.1.3.1 1
lineage3.1 1
lineage4.2.1.1;lineage4.3.3 1
lineage3.1.3 1
lineage4.3.4 1
La1;lineage2;lineage4.9 1
lineage4.8.1 1
M.canetti;lineage4.9 1
La1.3 1
lineage2.2.1;lineage4.5 1
lineage4.1.1.3 2
lineage4.9;lineage7 2
La1.7 1
lineage4.3.1;lineage4.9;lineage6 1
La1.7.X-unk4 1
La1.7.1;La1.7.X-unk4;lineage7 1
spoligotype Counts
spoligotype Count
None 375
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4798431 Other lineage4.1;lineage4.9 None
SRR6044835 Other lineage4.9 None
SRR6045191 Sensitive lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
ERR473323 HR-TB lineage4.9 None
SRR5341396 Other lineage3;lineage4.9 None
ERR6359082 Other lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR363479 Other lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
ERR473334 HR-TB lineage4.9 None
ERR369159 Other lineage4.9 None
ERR502511 HR-TB lineage4.9 None
ERR3283028 Other La3;lineage4 None
ERR4769442 Sensitive lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6045359 HR-TB lineage4.9 None
SRR6045053 Other lineage4 None
SRR12708416 Sensitive None
ERR349300 Other lineage4.9 None
ERR137286 Other lineage4.9 None
ERR6358979 HR-TB lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
SRR9971114 Other lineage2.2.1 None
SRR3675385 Other La1.7;lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR2513724 Sensitive lineage4.3.2.1 None
SRR1175496 Sensitive lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
ERR363499 Other lineage4.9 None
ERR369158 Other lineage4.9 None
ERR369151 Other lineage4.9 None
ERR2693252 HR-TB lineage4.9 None
SRR6046492 Other lineage4.9 None
ERR3797079 Sensitive lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR1159378 Other lineage4.9 None
ERR349296 Sensitive lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
ERR6866639 HR-TB lineage4.9 None
ERR363474 Sensitive lineage4.9 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR7535082 Other lineage4.9 None
ERR4769433 RR-TB lineage4.9 None
ERR4596902 MDR-TB lineage3 None
ERR3283031 Other La3;lineage4.9 None
ERR363506 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
ERR4819314 HR-TB lineage1.1.1 None
ERR176741 Other lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR369163 Other lineage4.9 None
SRR3675210 Sensitive lineage4.9 None
ERR4815550 Other lineage2.2;lineage4.9 None
ERR4799025 Other lineage4.8 None
ERR4769508 RR-TB lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341345 Sensitive lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
ERR3275709 HR-TB lineage3 nl
SRR14782054 Other lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
SRR3675577 Sensitive lineage4.9 None
SRR12708415 HR-TB lineage2.2.1 None
SRR16156817 Other lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
SRR6046593 Other lineage4.9 None
ERR349330 Sensitive lineage4.9 None
SRR7236177 Other La1.8.1 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR323066 HR-TB lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
ERR4820043 Sensitive lineage4.1.2.1 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
SRR1175508 Sensitive lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
ERR4811031 Other lineage4.5 None
SRR10315567 HR-TB lineage2.2.1 None
SRR7496471 Sensitive lineage4 None
ERR3283011 Other La3;lineage4.9 None
ERR349299 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR4769550 Sensitive La1;lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR1035122 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR4815471 HR-TB lineage4.9 None
SRR5341267 Pre-XDR-TB lineage3 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
SRR1172885 HR-TB lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
SRR12708384 Sensitive lineage4.9 None
ERR736831 Other lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
ERR4812155 Other lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR363502 Other lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
SRR6832644 Other lineage4.3.3;lineage4.9 None
ERR126597 HR-TB lineage4.4.1.2 None
SRR9970978 Other La1;lineage4.1.2 None
SRR6044819 Sensitive lineage4.9 None
ERR4769452 Other lineage4.9 None
SRR5341467 Other lineage4.9 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR5341425 Other lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4769450 Other lineage4.9 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SRR22251329 Other lineage2.1 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR6045503 Other lineage4.9 None
SRR3675209 Sensitive lineage4.9 None
ERR349266 Other lineage4.9 None
ERR2027233 Sensitive lineage4.1.2.1 None
SRR7496523 Other lineage4.7 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR736856 HR-TB lineage4.9 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR363446 Other lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
SRR30182471 Sensitive lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR369162 Other lineage4.9 None
SRR1173568 Sensitive lineage4.9 None
ERR4797474 Other lineage4.9 None
ERR4818710 Sensitive lineage4.9 None
ERR4816113 Sensitive lineage4.1.1.1 None
SRR6046611 Sensitive lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR779852 HR-TB lineage4.9 None
ERR373945 Other lineage4.9 None
ERR4769530 RR-TB lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4818252 HR-TB lineage4.1.1.2 None
SRR20632814 Sensitive lineage4.9 None
SRR23961549 Other La1.2 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR369157 Sensitive lineage4.9 None
SRR6046046 Other lineage4.9 None
ERR4798099 HR-TB lineage4.9 None
SRR5341298 Other lineage4.9 None
ERR702405 HR-TB lineage4.9 None
ERR4816964 HR-TB lineage4.9 None
ERR9786528 Sensitive lineage4.6.2.2 None
SRR3675265 Other lineage4 None
SRR3675292 Sensitive lineage4.9 None
ERR4769554 RR-TB lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR3797048 Other La3;lineage4.9 None
ERR6866410 HR-TB lineage4.9 None
ERR4816322 Other lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR2513259 Other lineage3 None
SRR12142339 HR-TB lineage2.2.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
SRR6046564 Sensitive lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR2512770 Sensitive lineage4.2.1 None
ERR4799547 HR-TB lineage2.2.1 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR323115 Sensitive lineage4.9 None
ERR369161 Sensitive lineage4.9 None
ERR4816762 Sensitive lineage4.9 None
ERR9787256 Other lineage6.1.3 None
ERR4769439 HR-TB lineage4.9 None
SRR5818647 Other lineage4.3.4.2.1 None
ERR4818561 Sensitive lineage4.9 None
ERR349265 Other lineage4.9 None
ERR1063855 Other lineage4.9 None
SRR6045002 RR-TB lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR400345 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR6865502 Sensitive lineage4 None
ERR11465353 Sensitive lineage4.3.4.1 None
SRR3675548 Sensitive lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
SRR3675267 Other La1.7;lineage4.9 None
ERR4769457 Other lineage4.9 None
SRR3675580 Sensitive lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR1180996 Other lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
ERR349264 Other lineage4.9 None
SRR3675318 Other lineage4.9 None
ERR323062 HR-TB lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR363498 Other lineage4.9 None
SRR6046210 Other lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR751326 Other lineage4.9 None
SRR3675235 HR-TB lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
SRR6045706 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR6358951 Sensitive lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR6359069 HR-TB lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR11465802 Other La1.7;lineage4.3.4.1 None
ERR363509 Sensitive lineage4.9 None
SRR3675246 Other lineage4.9 None
ERR4178226 Sensitive lineage4 None
SRR16156775 Other lineage4.9 None
SRR5341455 Sensitive lineage4.9 None
ERR363447 Other lineage4.9 None
SRR1158918 Other lineage4.9 None
ERR369156 Sensitive lineage4.9 None
SRR3675247 Other lineage4.9 None
ERR373947 Other lineage4.9 None
SRR1173777 Sensitive lineage4.9 None
ERR400538 RR-TB lineage5.1.2 None
SRR11349186 MDR-TB lineage4.3.3 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR2517475 Other lineage4 None
ERR502510 HR-TB lineage4.9 None
ERR363500 Other lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
ERR736834 HR-TB lineage4.9 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
SRR7070157 Other lineage4.1.1.3.1 None
ERR363456 Sensitive lineage4.9 None
ERR1063896 HR-TB None
ERR4817069 RR-TB None
SRR28351442 HR-TB lineage3.1 None
ERR4796577 HR-TB None
ERR9786597 Other lineage4.6.2.2 None
SRR6045795 Other lineage2.2.1 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR363449 Other lineage4.9 None
ERR4817998 Other lineage3 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR6046385 Sensitive lineage4.9 None
ERR2513121 Sensitive lineage3.1.3 None
ERR736817 HR-TB lineage4.3.4 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
ERR4769493 Other lineage4.9 None
SRR10808668 Other lineage2.2.1 None
ERR363421 Other lineage4.9 None
ERR400320 Sensitive lineage4.9 None
ERR9786076 Other lineage3 None
SRR3675270 Other lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR6046878 Other lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR1791747 Other La1.8.1 None
SRR3675501 Other La1.7;lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
SRR3675492 Other La1.7;lineage4.9 None
SRR10315466 RR-TB lineage2.2.1 None
ERR4816466 HR-TB lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR4178309 Other lineage4.1.2.1 None
SRR7535074 Sensitive lineage3 None
SRR7535053 Sensitive lineage3 None
SRR3675473 Sensitive lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
SRR5153091 HR-TB lineage4.3.3 None
ERR067712 Sensitive lineage4.9 None
ERR216965 Sensitive lineage4.9 None
SRR23961542 Other La1;lineage4.9 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
SRR9971150 RR-TB lineage4.8.1 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR373946 Other lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR4769514 Other La1.3 None
SRR1183965 Sensitive lineage4.9 None
SRR5341310 Other lineage1.1.2 None
SRR6046897 Sensitive lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR124636 HR-TB lineage4.9 None
SRR6982141 Other lineage4.3.3 None
ERR4816470 HR-TB lineage3 None
ERR3797063 Other La3;lineage4.9 None
SRR9971026 Sensitive lineage4.4.1.1.1 None
ERR400336 Sensitive lineage4.9 None
ERR11465801 Other lineage4.3.4.1 None
ERR4811030 Other lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR4811035 Pre-XDR-TB lineage2.2.1;lineage4.5 None
SRR3675477 Sensitive lineage4.9 None
ERR400326 Other lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
SRR9971270 RR-TB lineage2.2.1 None
ERR2514552 Sensitive lineage3 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR4814639 HR-TB lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
ERR485006 HR-TB lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR3273109 HR-TB lineage4 None
SRR3675585 HR-TB lineage4.9 None
SRR5341387 Other lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR4829530 Pre-XDR-TB lineage4.8 None
ERR323107 HR-TB lineage4.9 None
ERR4796254 Other lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR323037 Other lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR10808399 Sensitive lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
SRR3675387 Other lineage4.9 None
ERR3283014 Other La3;lineage4.9 None
SRR10809074 HR-TB lineage4.9 None
ERR4814396 Sensitive lineage4.1.1.3 None
ERR363490 Other lineage4.9 None
ERR4830353 HR-TB La1.7 None
SRR12416842 HR-TB lineage4.9 None
ERR3468488 Other La1.8.1 None
SRR6044875 Other lineage4.9 None
ERR4819546 HR-TB lineage3 None
ERR4769444 HR-TB lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR5341437 Sensitive lineage4.9 None
ERR4769418 Other La1.2 None
SRR7236330 Other La1.8.1 None
ERR4797313 Sensitive lineage2.2.1 None
SRR14782405 HR-TB lineage4.9 None
ERR3445487 Other La1.7.X-unk4 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR3675514 Sensitive lineage4.9 None
ERR363453 Other lineage4.9 None
SRR3675547 Sensitive lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR4797184 HR-TB lineage4.9 None