Rv0668 - c.1734G>T


Drug resistance types
26 Sensitive 8 RR-TB 65 HR-TB 21 MDR-TB 5 Pre-XDR-TB 1 XDR-TB 161 Other
lineage Counts
lineage Count
lineage3 7
lineage4.9 110
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage4.6.2.2 1
lineage4.1.2.1 9
19
lineage4.9;lineage6.3 5
lineage4 8
lineage4.5 2
lineage2.2.1 8
lineage2.2 2
La3;lineage4.8 1
lineage6.3.1 1
La1.8.1 1
lineage2.1;lineage4.9;lineage6.3 8
La3;lineage4.9 12
La1.2.BCG;La1.8.1 1
lineage4.6.1.1 1
lineage2.1;lineage4.9 12
lineage1;lineage4.9 2
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage4.1.1.1 3
lineage4.9;lineage7 1
La3 2
M.canetti;lineage2.1;lineage4.9 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.1.3 2
lineage2.1 3
lineage4.8 5
La3;lineage2.2.1 1
lineage2.2.1;lineage4.9 1
lineage4.7 2
La3;lineage2.1;lineage6.3 1
M.canetti;lineage4.9 3
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage2.1;lineage4.9 3
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.9.1 1
lineage2.1;lineage6.3 2
La2;lineage4.9 1
lineage3.1 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.3.2.1 1
La1.7.1;lineage4.9 1
La1.7;lineage4.9;lineage7 2
lineage4.2;lineage4.6.3;lineage4.9 1
La1.7.1;La1.7.X-unk4;lineage7 1
La3;lineage2 1
lineage4.1;lineage4.9 1
lineage6.1.3 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.3.4.2.1 1
La1.7;lineage4.9 4
lineage4.3.4 1
lineage1.1.2 1
La2;lineage2.2 1
lineage2.2.2 1
La3;lineage1.1.2 1
La1.7.1 1
lineage4.1.2 1
lineage1.1.1 1
lineage2.2.1;lineage3 1
lineage4.1;lineage4.8 1
lineage2.2.1;lineage6.3 1
lineage4.3.2 1
lineage1.2.2.1;lineage4.4.1.1 1
lineage1.2.1.2 1
La1;lineage4.1.2 1
M.canetti;lineage2.1;lineage6.3 1
La1.7;lineage3;lineage4.9;lineage7 1
spoligotype Counts
spoligotype Count
None 287
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR17658565 Pre-XDR-TB lineage3 None
ERR3283018 HR-TB lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR4819241 Other lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR363446 Other lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
SRR3675572 Other None
SRR1175074 Other None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR9786604 Other None
ERR9117709 Other None
SRR6789626 Other None
SRR25827682 Other None
SRR28351339 MDR-TB lineage4 None
SRR3675236 Other None
ERR752229 Other lineage4.5 None
ERR369162 Other lineage4.9 None
ERR4797474 Other lineage4.9 None
SRR6046611 Sensitive lineage4.9 None
SRR5341373 Other lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4817998 Other lineage3 None
ERR176651 Other lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR373945 Other lineage4.9 None
ERR4817893 Other La3;lineage4.8 None
SRR20632814 Sensitive lineage4.9 None
ERR9787139 Other lineage6.3.1 None
SRR11462861 Other La1.8.1 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4596902 MDR-TB lineage3 None
ERR3283031 Other La3;lineage4.9 None
SRR3675214 Other lineage4.9 None
ERR3283044 Other lineage4 None
ERR4799547 HR-TB lineage2.2.1 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR6358755 Other lineage4.6.1.1 None
SRR15368973 Other lineage4.9 None
ERR4816762 Sensitive lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR3797063 Other La3;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR7496471 Sensitive lineage4 None
ERR4811030 Other lineage4.9 None
SRR7496472 Other lineage4.9 None
ERR349264 Other lineage4.9 None
ERR4814639 HR-TB lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR363498 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR3445502 HR-TB lineage4.9;lineage7 None
SRR6045706 Other lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
ERR4816904 Sensitive lineage4.1.2.1 None
SRR1165699 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR3675387 Other lineage4.9 None
SRR1172728 RR-TB La3 None
ERR6358951 Sensitive lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR6359069 HR-TB lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR4769444 HR-TB lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR4178226 Sensitive lineage4 None
ERR363453 Other lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR2229542 Other lineage4.8 None
ERR373947 Other lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4815752 Other lineage4.9 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
ERR363479 Other lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR7496523 Other lineage4.7 None
ERR9786682 Other lineage4.1.2.1 None
ERR369159 Other lineage4.9 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1184381 MDR-TB None
ERR9786671 Other None
ERR11252612 Other La3;lineage4.9 None
SRR18213713 HR-TB None
ERR4407463 HR-TB None
ERR4816999 Other None
SRR1196768 MDR-TB None
ERR6359074 HR-TB lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR363421 Other lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR245758 Other lineage4.9.1 None
ERR349296 Sensitive lineage4.9 None
SRR5535933 Other lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR4817667 HR-TB lineage4.8 None
SRR1196677 Other lineage2.2 None
ERR702406 Other lineage2.1 None
ERR363506 Sensitive lineage4.9 None
SRR6046245 Other lineage4.9 None
ERR369163 Other lineage4.9 None
ERR067712 Sensitive lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR369161 Sensitive lineage4.9 None
SRR6045526 Other lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR181887 Other lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR2027263 Other lineage4 None
ERR349265 Other lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR363426 Sensitive lineage4.9 None
SRR6046897 Sensitive lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR349330 Sensitive lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
SRR26159043 Other lineage4.9 None
ERR176778 HR-TB lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
ERR4816470 HR-TB lineage3 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR400326 Other lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR3797070 Other lineage4.9 None
ERR176779 HR-TB lineage4.9 None
SRR3675221 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1172951 Other lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
ERR4817731 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR363502 Other lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR9786694 Other lineage4.1.2.1 None
SRR1165628 Other La3;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
SRR20969677 HR-TB La3;lineage2 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR363447 Other lineage4.9 None
ERR4798431 Other lineage4.1;lineage4.9 None
SRR6044835 Other lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9787165 Other lineage6.1.3 None
ERR9786601 Other lineage4.1.2.1 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4815815 Sensitive lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR6045503 Other lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
ERR349266 Other lineage4.9 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR9786617 Other lineage4.1.1.1 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6045359 HR-TB lineage4.9 None
SRR7496509 Other None
ERR9786843 Other None
SRR1184372 MDR-TB None
ERR4796577 HR-TB None
ERR234659 HR-TB None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
ERR349300 Other lineage4.9 None
ERR6866807 RR-TB lineage4.9 None
SRR1196583 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
SRR3675441 RR-TB lineage4.9 None
ERR363449 Other lineage4.9 None
SRR3675275 Other lineage4.9 None
ERR4800341 HR-TB lineage3 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR736817 HR-TB lineage4.3.4 None
SRR25827687 MDR-TB lineage1.1.2 None
ERR369157 Sensitive lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR363499 Other lineage4.9 None
ERR369158 Other lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4816964 HR-TB lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR18910194 HR-TB lineage2.2.2 None
SRR26399973 Other La3;lineage4.9 None
ERR4819932 Other lineage4.7 None
ERR3283055 HR-TB lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR1792478 HR-TB La1.7.1 None
SRR9970980 HR-TB lineage4.1.2 None
ERR4820773 HR-TB lineage4.9 None
ERR9786569 Other lineage4.8 None
SRR1167384 Other La3;lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR4819314 HR-TB lineage1.1.1 None
ERR990545 RR-TB lineage3 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
ERR3275709 HR-TB lineage3 nl
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR3675232 Other lineage4.1.2.1 None
SRR6046066 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
SRR10315751 MDR-TB lineage4.8 None
ERR373946 Other lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
ERR400345 Other lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR4798823 HR-TB lineage4 None
ERR6865502 Sensitive lineage4 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR4811031 Other lineage4.5 None
ERR349299 Other lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR9117805 Other lineage4.3.2 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR11465714 Other lineage1.2.2.1;lineage4.4.1.1 None
SRR12006550 Other lineage1.2.1.2 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR3283014 Other La3;lineage4.9 None
ERR363490 Other lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
SRR6044875 Other lineage4.9 None
ERR11049020 Other lineage4.8 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR363509 Sensitive lineage4.9 None
ERR4819781 Other lineage2.2.1 None
SRR3675457 Other lineage4.9 None
ERR473332 Other lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR1172817 Other La3 None
SRR6045191 Sensitive lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None