lineage | Count |
---|---|
lineage4 | 42 |
lineage4.9 | 8 |
lineage9;lineage3.1 | 1 |
26 | |
lineage4.1.1 | 1 |
lineage4.1.1.2 | 1 |
lineage3 | 1 |
lineage4.1.1.3 | 1 |
lineage4.9;lineage4.6.2 | 1 |
lineage4.3.2.1 | 1 |
lineage3.1 | 2 |
lineage2.2.1 | 1 |
lineage4.8.1 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.1.2.1 | 8 |
lineage4.1.2.1.1 | 1 |
lineage4.3.2 | 1 |
lineage6.1.3 | 1 |
spoligotype | Count |
---|---|
None | 99 |
ID | Drug resistance | Lineage | Country iso2 | SRR3675265 | Other | lineage4 | None | SRR16157123 | Other | lineage4.9 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR6325445 | HR-TB | None | SRR3675510 | Other | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675545 | HR-TB | None | ERR4816113 | Sensitive | lineage4.1.1 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4817998 | Other | lineage3 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4820580 | Sensitive | lineage4.9;lineage4.6.2 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6045519 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045503 | HR-TB | None | ERR278594 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046210 | Other | lineage4 | None | SRR6325447 | HR-TB | None | SRR6325448 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | SRR6046802 | Other | lineage4 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6325442 | HR-TB | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR323036 | HR-TB | None | ERR323038 | HR-TB | None | ERR323107 | Other | lineage4 | None | ERR323041 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323055 | HR-TB | None | ERR323063 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR1063883 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1034634 | HR-TB | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349264 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363437 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR3797083 | HR-TB | None | ERR4796577 | MDR-TB | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4188247 | HR-TB | None | ERR4796929 | Sensitive | lineage4 | None | ERR6358979 | Other | None | ERR6358837 | HR-TB | None | ERR4798431 | HR-TB | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6865502 | Sensitive | lineage4 | None | ERR736839 | Other | None | SRR10808805 | Sensitive | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR736848 | HR-TB | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None |
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