Rv0667 - c.1278C>A
Drug resistance types
134 Sensitive
72 RR-TB
29 HR-TB
35 MDR-TB
15 Pre-XDR-TB
0 XDR-TB
67 Other
lineage Counts
| lineage | Count |
|---|---|
| 34 | |
| lineage4 | 81 |
| lineage4.1.2.1 | 12 |
| lineage5.1.2 | 1 |
| La1.3 | 6 |
| lineage4.9 | 96 |
| lineage4.9;La1.3 | 1 |
| lineage3.1.2.1 | 2 |
| lineage4.5 | 1 |
| lineage2.2.1 | 13 |
| lineage4.4.1.1 | 3 |
| lineage4.1.1.3 | 3 |
| lineage4.7 | 2 |
| lineage3 | 23 |
| lineage4.1.4 | 1 |
| lineage4.8 | 17 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| La1.6 | 1 |
| lineage4.3.3 | 4 |
| lineage4.3.2.1 | 4 |
| lineage4.4.1.1.1 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 3 |
| lineage2 | 1 |
| La1.8.1 | 3 |
| lineage4.1 | 2 |
| lineage4.2.1 | 4 |
| lineage1.2.2 | 1 |
| lineage5 | 1 |
| lineage4.1.1 | 2 |
| lineage1.2.1.1 | 1 |
| lineage3.1 | 1 |
| lineage3.1.1 | 2 |
| lineage5.1.4 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage1.1.3.1 | 2 |
| lineage4.3.4.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage4.3.1 | 1 |
| lineage1.1.2 | 1 |
| lineage2.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.3 | 1 |
| lineage4.1.2 | 1 |
| lineage4.8.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 352 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3797048 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797079 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4024991 | Other | None | ERR4178226 | Sensitive | lineage4 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769408 | Other | La1.3 | None | ERR4769436 | Other | La1.3 | None | ERR4596910 | Sensitive | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR4769512 | Sensitive | lineage4.9 | None | ERR4769552 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4812155 | Sensitive | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797474 | Other | None | ERR4798898 | MDR-TB | lineage3.1.2.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4769555 | Other | La1.3 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4797313 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4798099 | Other | None | ERR4798431 | HR-TB | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4811030 | Sensitive | None | ERR6865502 | Sensitive | lineage4 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6866022 | Other | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR6866410 | Sensitive | None | ERR6866639 | Other | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR736834 | Sensitive | lineage4 | None | ERR736837 | Other | lineage4.9 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR1049672 | Other | lineage3 | None | ERR9901813 | RR-TB | lineage4.1.4 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1140736 | RR-TB | None | SRR1173740 | Other | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR13837443 | Sensitive | lineage4.9 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR13837659 | Sensitive | lineage4.9 | None | SRR13837671 | Sensitive | lineage4.9 | None | SRR16134492 | RR-TB | lineage4.9 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR20632814 | Sensitive | lineage4 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR3275450 | Other | lineage4 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR4815298 | Other | lineage4.3.4.2.1 | None | ERR4814396 | Sensitive | lineage4.1.1.3 | None | ERR4815394 | RR-TB | lineage4.2.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675229 | Other | lineage4 | None | ERR1750908 | Sensitive | lineage4 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4814841 | Other | lineage4.1 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675265 | Other | lineage4 | None | ERR4813263 | MDR-TB | lineage4.8 | None | SRR3675279 | Other | None | SRR3675318 | Other | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR3675387 | Sensitive | None | SRR3675455 | Sensitive | lineage4 | None | ERR4815910 | Other | lineage4.1.2.1 | None | ERR4815556 | RR-TB | lineage3 | None | ERR4816982 | Other | lineage4 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | SRR3675522 | Other | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR3675537 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR4817367 | Sensitive | lineage4.9 | None | ERR4816183 | Other | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR2027290 | RR-TB | lineage3.1 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4817069 | RR-TB | None | ERR4816476 | Other | lineage3.1.2.1 | None | ERR2229429 | HR-TB | lineage4.8 | None | ERR4816756 | RR-TB | None | ERR4817131 | Pre-XDR-TB | None | ERR4817189 | Other | lineage4.7 | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819017 | RR-TB | lineage3 | None | ERR2228810 | RR-TB | lineage4 | None | ERR4817964 | RR-TB | lineage4.1.2.1 | gb | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR2245334 | Sensitive | lineage3.1.1 | None | ERR4817998 | Other | lineage3 | None | ERR4819051 | Other | lineage4 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR2513438 | Sensitive | lineage4.1.2.1 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR2509885 | RR-TB | lineage3 | None | ERR2512606 | MDR-TB | lineage3 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR4818393 | RR-TB | lineage3 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR2509886 | RR-TB | lineage3 | None | ERR2513283 | Other | lineage5.1.4 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007165 | MDR-TB | lineage3 | None | ERR4818948 | Sensitive | lineage4.3.3 | gb | ERR2512849 | RR-TB | lineage1.1.3.1 | None | ERR4817584 | MDR-TB | lineage3 | None | SRR5007170 | RR-TB | lineage4.9 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819305 | RR-TB | lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR5341396 | Other | lineage4 | None | ERR2514137 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819456 | Other | lineage4.8 | None | ERR4819528 | RR-TB | lineage3 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR2514514 | RR-TB | lineage3 | gb | ERR2514552 | Sensitive | lineage3 | None | SRR5341300 | Other | lineage4 | None | ERR4819678 | Sensitive | lineage4.9 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR5341308 | Sensitive | lineage4 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR2446382 | Other | lineage4 | None | SRR5341469 | Other | lineage4 | None | ERR4820043 | Sensitive | lineage4.1.2.1 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR4820030 | Other | lineage4.9 | None | ERR4820951 | HR-TB | lineage1.2.2.2 | None | ERR2517475 | Other | lineage4 | None | SRR6045503 | HR-TB | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR2517627 | RR-TB | lineage4.8 | nl | SRR6046117 | RR-TB | lineage4.9 | None | SRR6045909 | Other | lineage4.8 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821214 | RR-TB | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR4821712 | HR-TB | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6044784 | MDR-TB | lineage3 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR4821331 | HR-TB | lineage4.8 | None | ERR4822104 | RR-TB | lineage3 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6045267 | RR-TB | lineage4 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046617 | HR-TB | lineage2.2.1 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | SRR6046611 | HR-TB | lineage4.9 | None | ERR4828879 | MDR-TB | lineage3 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6046802 | Other | lineage4 | None | ERR323037 | HR-TB | lineage4 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6511621 | HR-TB | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4832002 | Pre-XDR-TB | lineage2.1 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR502510 | Sensitive | lineage4 | None | ERR4831638 | Sensitive | None | SRR6982141 | RR-TB | lineage4.3.3 | None | ERR5311077 | RR-TB | La1.8.1 | None | ERR502943 | HR-TB | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR1035122 | Sensitive | None | ERR017781 | Other | lineage3 | None | ERR3283014 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR1063855 | Other | lineage4 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283028 | Other | None | ERR3283031 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283047 | HR-TB | None | ERR349299 | Sensitive | lineage4 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR349264 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR373946 | Sensitive | lineage4 | None |
|---|
