ERR2513382
|
RR-TB
|
lineage4.1.1.3
|
None
|
SRR10315556
|
Sensitive
|
lineage2.2.1
|
None
|
SRR1181215
|
Sensitive
|
lineage4.4.1.1.1
|
None
|
ERR3283028
|
Other
|
La3;lineage4
|
None
|
SRR1180440
|
Other
|
lineage4.9
|
None
|
ERR4809333
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR369163
|
Sensitive
|
lineage4.9
|
None
|
ERR363498
|
Sensitive
|
lineage4.9
|
None
|
ERR502481
|
RR-TB
|
lineage4.9
|
None
|
ERR978694_ERR978693
|
Other
|
lineage4.8
|
None
|
SRR3675265
|
Other
|
lineage4
|
None
|
ERR751345
|
Other
|
lineage5.1.1
|
None
|
ERR5162090
|
RR-TB
|
lineage4.9
|
None
|
SRR5007167
|
RR-TB
|
lineage4.1.1.3.1
|
None
|
SRR12708413
|
HR-TB
|
lineage4.1.1.3
|
None
|
ERR4817667
|
HR-TB
|
lineage4.8
|
None
|
ERR2513259
|
Other
|
lineage3
|
None
|
SRR1181237
|
Sensitive
|
lineage2.2.1;lineage4
|
None
|
ERR736837
|
Pre-XDR-TB
|
lineage4.9
|
None
|
SRR12708415
|
HR-TB
|
lineage2.2.1
|
None
|
ERR736848
|
Other
|
lineage4.9
|
None
|
SRR12708418
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1184021
|
Sensitive
|
lineage4.9
|
None
|
ERR363421
|
Sensitive
|
lineage4.9
|
None
|
ERR369161
|
Sensitive
|
lineage4.9
|
None
|
SRR7755645
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4769508
|
RR-TB
|
lineage4.9
|
None
|
ERR926160
|
Sensitive
|
lineage4.9
|
None
|
ERR323045
|
HR-TB
|
lineage1;lineage4.9
|
None
|
SAMEA3501065
|
RR-TB
|
lineage4.8
|
None
|
ERR3283014
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR4818561
|
Sensitive
|
lineage4.9
|
None
|
ERR349265
|
Other
|
lineage4.9
|
None
|
ERR6865502
|
Sensitive
|
lineage4
|
None
|
ERR4819051
|
Sensitive
|
lineage4.9
|
None
|
ERR4816852
|
Other
|
lineage4.9
|
None
|
ERR978693
|
Other
|
lineage4.8
|
None
|
ERR3797063
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR4178226
|
Sensitive
|
lineage4
|
None
|
SRR22424787
|
Sensitive
|
lineage4.9
|
None
|
ERR161037
|
Other
|
lineage4.9
|
None
|
SRR10315567
|
HR-TB
|
lineage2.2.1
|
None
|
ERR349299
|
Other
|
lineage4.9
|
None
|
SRR9970981
|
RR-TB
|
lineage4.3.2.1
|
None
|
SRR12708411
|
HR-TB
|
lineage1.2.2.2
|
None
|
ERR978760
|
RR-TB
|
lineage4.8
|
None
|
ERR4815816
|
Other
|
lineage4.5
|
gb
|
SRR5818586
|
RR-TB
|
lineage4.2.2.2
|
None
|
ERR926163
|
Other
|
lineage4.9
|
None
|
ERR1023525
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR176779
|
HR-TB
|
lineage4.9
|
None
|
ERR867541
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR1180319
|
Sensitive
|
lineage4.9
|
None
|
SRR5341267
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR363499
|
Sensitive
|
lineage4.9
|
None
|
SRR1180977
|
Sensitive
|
lineage4.9
|
None
|
ERR2514430
|
Other
|
lineage3.1.2;lineage4.1.1.3.1
|
None
|
ERR2229366
|
Other
|
lineage4.8
|
None
|
ERR4814976
|
Other
|
lineage4.9
|
None
|
ERR3797064
|
Other
|
La3;lineage4.9
|
None
|
ERR369160
|
Sensitive
|
lineage4.9
|
None
|
ERR363445
|
Other
|
lineage4.9
|
None
|
SRR11342644
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR4819546
|
HR-TB
|
lineage3
|
None
|
ERR2228900
|
Other
|
lineage4.8
|
None
|
ERR9285979
|
RR-TB
|
lineage3.1.1
|
None
|
ERR11465352
|
Sensitive
|
lineage4.3.4.1
|
None
|
SRR4033549
|
Other
|
lineage2.2.2
|
None
|
ERR363447
|
Other
|
lineage4.9
|
None
|
SRR6045706
|
Sensitive
|
lineage4.9
|
None
|
SRR11342647
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR978734_ERR978733_ERR978735
|
RR-TB
|
lineage4.8
|
None
|
ERR978746
|
RR-TB
|
lineage4.8
|
None
|
ERR978735
|
Other
|
lineage4.8
|
None
|
SRR6044835
|
Other
|
lineage4.9
|
None
|
ERR400538
|
RR-TB
|
lineage5.1.2
|
None
|
ERR037504
|
Other
|
lineage4.9.1
|
None
|
ERR369157
|
Sensitive
|
lineage4.9
|
None
|
ERR212125
|
HR-TB
|
lineage4.9
|
None
|
SRR9971112
|
Other
|
lineage2.2.1
|
None
|
ERR1023502
|
MDR-TB
|
lineage2;lineage4
|
None
|
ERR867525
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1915487
|
Other
|
La1.2.BCG
|
None
|
SAMEA3501052
|
RR-TB
|
lineage4.8
|
None
|
SRR1181402
|
Sensitive
|
lineage4.9
|
None
|
SRR1735598
|
RR-TB
|
lineage4.9
|
None
|
ERR369159
|
Sensitive
|
lineage4.9
|
None
|
ERR405209
|
Sensitive
|
La1.7;lineage4.9
|
None
|
ERR349264
|
Sensitive
|
lineage4.9
|
None
|
SRR1173281
|
Other
|
lineage3
|
None
|
ERR349330
|
Sensitive
|
lineage4.9
|
None
|
ERR926156
|
Sensitive
|
lineage4.9
|
None
|
SRR1180355
|
Sensitive
|
lineage4.9
|
None
|
SRR1181256
|
Other
|
lineage4.9
|
None
|
ERR017781
|
Other
|
lineage3
|
None
|
ERR736875
|
HR-TB
|
lineage4.9
|
None
|
SRR1140724
|
Other
|
lineage2.2.1
|
None
|
SRR9971270
|
RR-TB
|
lineage2.2.1
|
None
|
SRR11342693
|
MDR-TB
|
lineage4.8.1
|
None
|
SRR11349145
|
Pre-XDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR11462861
|
Other
|
La1.8.1
|
None
|
ERR4769530
|
RR-TB
|
lineage4.9
|
None
|
SRR6046141
|
Other
|
lineage4.9
|
None
|
ERR323044
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
SRR6045010
|
Sensitive
|
lineage4.9
|
None
|
ERR978751
|
Other
|
lineage4.8
|
None
|
SAMEA3501063
|
RR-TB
|
lineage4.8
|
None
|
SRR1181325
|
Sensitive
|
lineage4.9
|
None
|
ERR176651
|
Other
|
lineage4.9
|
None
|
SRR6397733
|
Other
|
lineage4.4.1.2
|
None
|
SRR12708414
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4817998
|
Other
|
lineage3
|
None
|
ERR978746_ERR978747_ERR978748
|
RR-TB
|
lineage4.8
|
None
|
SRR15315797
|
RR-TB
|
lineage2.2.1
|
None
|
SRR1049673
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR1180345
|
Other
|
lineage4.9
|
None
|
SRR1172807
|
Sensitive
|
lineage4.9
|
None
|
SRR12708399
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
SRR1180375
|
Sensitive
|
lineage4.9
|
None
|
SRR1180300
|
Sensitive
|
lineage4.9
|
None
|
SRR1180444
|
Sensitive
|
lineage4.9
|
None
|
ERR978756
|
Other
|
lineage4.8
|
None
|
SRR6045191
|
Sensitive
|
lineage4.9
|
None
|
ERR3797048
|
Other
|
La3;lineage4.9
|
None
|
ERR4178309
|
Other
|
lineage4.1.2.1
|
None
|
SRR11342687
|
RR-TB
|
lineage4.2.2.2
|
None
|
SAMEA3501015
|
Other
|
lineage4.8
|
None
|
SRR1184114
|
Sensitive
|
lineage2.2.1;lineage4.9
|
None
|
ERR4799547
|
HR-TB
|
lineage2.2.1
|
None
|
ERR349300
|
Sensitive
|
lineage4.9
|
None
|
ERR067712
|
Sensitive
|
lineage4.9
|
None
|
ERR978761_ERR978762_ERR978760
|
RR-TB
|
lineage4.8
|
None
|
SRR9971150
|
RR-TB
|
lineage4.8.1
|
None
|
ERR736856
|
Sensitive
|
lineage4.9
|
None
|
ERR978750_ERR978752_ERR978751
|
RR-TB
|
lineage4.8
|
None
|
ERR3797015
|
HR-TB
|
lineage4.9
|
None
|
SRR10315751
|
MDR-TB
|
lineage4.8
|
None
|
ERR978755_ERR978756_ERR978754_ERR978757
|
RR-TB
|
lineage4.8
|
None
|
SRR1180420
|
Sensitive
|
lineage4.9
|
None
|
ERR11465628
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR405219
|
HR-TB
|
La1.7;lineage3.1;lineage4
|
None
|
ERR4799478
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR11662694
|
Other
|
lineage4.9
|
None
|
ERR3283047
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR363474
|
Sensitive
|
lineage4.9
|
None
|
ERR926158
|
Sensitive
|
lineage4.9
|
None
|
ERR4769474
|
HR-TB
|
lineage4.9
|
None
|
SRR12708370
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR2228890
|
Other
|
lineage4.8;lineage4.9
|
None
|
ERR926161
|
Sensitive
|
lineage4.9
|
None
|
SRR6044876
|
Sensitive
|
lineage4.9
|
None
|
SRR12708392
|
Other
|
lineage2.2.1
|
None
|
ERR867523
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4814639
|
HR-TB
|
lineage4.9
|
None
|
SRR1915481
|
Other
|
La1.2.BCG;lineage4.9
|
None
|
ERR1063862
|
HR-TB
|
lineage4.9
|
None
|
SRR6045371
|
Other
|
lineage4.9
|
None
|
ERR1063859
|
HR-TB
|
La1.7.1;lineage4.9
|
None
|
ERR4769436
|
Other
|
La1.3
|
None
|
ERR926159
|
Sensitive
|
lineage4.9
|
None
|
ERR5987263
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4596902
|
MDR-TB
|
lineage3
|
None
|
ERR4816904
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR1172885
|
HR-TB
|
lineage4.9
|
None
|
ERR4596910
|
Sensitive
|
lineage4.9
|
None
|
ERR926154
|
Sensitive
|
lineage4.9
|
None
|
ERR978747
|
Other
|
lineage4.8
|
None
|
ERR1023509
|
Other
|
lineage4.9
|
None
|
ERR363502
|
Other
|
lineage4.9
|
None
|
ERR3445501
|
HR-TB
|
La1.7.1;La1.7.X-unk4;lineage7
|
None
|
ERR323056
|
HR-TB
|
lineage4.4.1.2
|
None
|
SRR21677886
|
Sensitive
|
lineage4.9
|
None
|
SRR14801652
|
HR-TB
|
lineage4.3.3
|
None
|
ERR11465189
|
RR-TB
|
lineage4.9.1
|
None
|
ERR349266
|
Sensitive
|
lineage4.9
|
None
|
ERR5311094
|
HR-TB
|
lineage4.9
|
None
|
ERR373946
|
Sensitive
|
lineage4.9
|
None
|
ERR978726_ERR978727
|
RR-TB
|
lineage4.8
|
None
|
SRR1181351
|
Sensitive
|
lineage4.9
|
None
|
ERR3283057
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR4815815
|
Sensitive
|
lineage4.9
|
None
|
ERR978754
|
RR-TB
|
lineage4.8
|
None
|
SAMEA3501070
|
RR-TB
|
lineage4.8
|
None
|
ERR11465510
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR20632814
|
Sensitive
|
lineage4.9
|
None
|
ERR978757
|
RR-TB
|
lineage4.8
|
None
|
ERR5917985
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1175491
|
MDR-TB
|
lineage4.3.4.1
|
None
|
SRR7755649
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR363446
|
Sensitive
|
lineage4.9
|
None
|
ERR3797087
|
Sensitive
|
lineage4.9
|
None
|
ERR3445502
|
Sensitive
|
lineage4.9;lineage7
|
None
|
ERR926165
|
Sensitive
|
lineage4.9
|
None
|
ERR2228810
|
Other
|
lineage4.8;lineage4.9
|
None
|
SRR6045795
|
Sensitive
|
lineage2.2.1
|
None
|
SRR1175513
|
Sensitive
|
lineage4.9
|
None
|
ERR1063858
|
HR-TB
|
lineage4.9
|
None
|
SRR6045832
|
Other
|
lineage4.9
|
None
|
SRR18002947
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR926155
|
Sensitive
|
lineage4.9
|
None
|
ERR4798823
|
HR-TB
|
lineage4
|
None
|
ERR4819314
|
Other
|
lineage1.1.1
|
None
|
SRR1049674
|
HR-TB
|
lineage2.2.1
|
None
|
ERR926157
|
Sensitive
|
lineage4.9
|
None
|
SRR11342662
|
MDR-TB
|
lineage4.8.1
|
None
|
SRR1140712
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR1175506
|
Sensitive
|
lineage4.9
|
None
|
SRR1180250
|
Other
|
lineage4.9
|
None
|
SRR1175052
|
HR-TB
|
lineage4.9
|
None
|
ERR978750
|
RR-TB
|
lineage4.8
|
None
|
SRR28351584
|
HR-TB
|
lineage2.2.1
|
None
|
SRR6045359
|
Sensitive
|
lineage4.9
|
None
|
ERR4808964
|
RR-TB
|
lineage2.2.1
|
None
|
ERR4798431
|
Sensitive
|
lineage4.1;lineage4.9
|
None
|
ERR978755
|
RR-TB
|
lineage4.8
|
None
|
SRR1181403
|
Other
|
lineage4.9
|
None
|
ERR978761
|
Other
|
lineage4.8
|
None
|
ERR736817
|
HR-TB
|
lineage4.3.4
|
None
|
ERR4818624
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR4815121
|
HR-TB
|
lineage4.6.2.2
|
None
|
SRR18003042
|
Other
|
lineage2.2.1
|
None
|
ERR369158
|
Other
|
lineage4.9
|
None
|
ERR867524
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
ERR369151
|
Other
|
lineage4.9
|
None
|
SRR1180391
|
Sensitive
|
lineage4.9
|
None
|
SRR6046839
|
Other
|
lineage4.9
|
None
|
SRR1915479
|
Other
|
La1.2.BCG
|
None
|
SRR1062919
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1180946
|
Sensitive
|
lineage2;lineage4.9
|
None
|
ERR9119733
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1172717
|
Sensitive
|
lineage4.9
|
None
|
ERR978726
|
RR-TB
|
lineage4.8
|
None
|
SRR6046616
|
Other
|
lineage4.3.1.1
|
None
|
ERR4188247
|
HR-TB
|
lineage4.9
|
None
|
SRR6046210
|
Other
|
lineage4.9
|
None
|
SRR7645899
|
Other
|
lineage2.2.1
|
None
|
ERR4821119
|
Other
|
lineage4.4.1.1
|
None
|
SRR3675292
|
Sensitive
|
lineage4.9
|
None
|
ERR978752
|
Other
|
lineage4.8
|
None
|
ERR363506
|
Sensitive
|
lineage4.9
|
None
|
ERR926162
|
Sensitive
|
lineage4.9
|
None
|
ERR363490
|
Sensitive
|
lineage4.9
|
None
|
ERR176741
|
Other
|
lineage4.9
|
None
|
SRR11342642
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR363479
|
Sensitive
|
lineage4.9
|
None
|
SRR12708407
|
HR-TB
|
lineage4.3.2.1
|
None
|
SRR1175487
|
Sensitive
|
lineage4.9
|
None
|
ERR978762
|
Other
|
lineage4.8
|
None
|
ERR181887
|
Other
|
lineage4.9
|
None
|
ERR3283030
|
HR-TB
|
lineage4.9
|
None
|
ERR3283031
|
Sensitive
|
La3;lineage4.9
|
None
|
SRR16627752
|
RR-TB
|
lineage4.4
|
None
|
ERR373945
|
Sensitive
|
lineage4.9
|
None
|
ERR363426
|
Sensitive
|
lineage4.9
|
None
|
SRR1062880
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR6046897
|
Sensitive
|
lineage4.9
|
None
|
ERR363449
|
Sensitive
|
lineage4.9
|
None
|
SRR1181283
|
Sensitive
|
lineage4.9
|
None
|
ERR4816470
|
HR-TB
|
lineage3
|
None
|
ERR3445503
|
Other
|
La1.7.1;La1.7.X-unk4
|
None
|
SRR7645901
|
MDR-TB
|
lineage2.2.1
|
None
|
SAMN02380990
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR2512423
|
Other
|
lineage4.1.1.3
|
None
|
SRR7496471
|
Sensitive
|
lineage4
|
None
|
ERR6865513
|
Other
|
lineage4.1.2.1
|
None
|
ERR3283011
|
Other
|
La3;lineage4.9
|
None
|
ERR1063846
|
HR-TB
|
lineage4.9
|
None
|
ERR4811035
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.5
|
None
|
SRR6045327
|
Other
|
lineage2.1;lineage4.3.2;lineage4.9
|
None
|
SRR6789624
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR3675260
|
Sensitive
|
lineage4.9
|
None
|
SRR6397815
|
Other
|
lineage4.4.1.1
|
None
|
ERR363509
|
Sensitive
|
lineage4.9
|
None
|
SRR6046376
|
Other
|
lineage3
|
None
|
SRR1183054
|
Sensitive
|
lineage4.9
|
None
|
SRR5007193
|
RR-TB
|
lineage4.1.1.3.1
|
None
|
SRR1181349
|
Sensitive
|
lineage4
|
None
|
ERR971389
|
Sensitive
|
lineage4.9
|
None
|
ERR11465232
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR926164
|
Other
|
lineage4.9
|
None
|
ERR1063849
|
HR-TB
|
lineage4.9
|
None
|
ERR3445487
|
Other
|
La1.7.X-unk4
|
None
|
SRR1180446
|
Other
|
lineage4.9
|
None
|
ERR473332
|
Other
|
lineage4.9
|
None
|
SRR1173740
|
Other
|
lineage3;lineage4
|
None
|
SRR1175512
|
Sensitive
|
lineage4.9
|
None
|
SRR1180399
|
Sensitive
|
lineage4.9
|
None
|
ERR1034634
|
HR-TB
|
lineage4.9
|
None
|
SRR29050859
|
Other
|
lineage4.9
|
None
|
ERR373947
|
Other
|
lineage4.9
|
None
|
ERR4819383
|
RR-TB
|
lineage4.9
|
None
|
SRR1915485
|
Other
|
La1.2.BCG
|
None
|
SRR1180413
|
Sensitive
|
lineage4.9
|
None
|
ERR9992879
|
XDR-TB
|
lineage4.3.3
|
None
|
SRR1181390
|
Sensitive
|
lineage2.2.1;lineage4.9
|
None
|
ERR245675
|
Sensitive
|
lineage1.1.2
|
None
|
ERR349296
|
Sensitive
|
lineage4.9
|
None
|
SRR11342664
|
MDR-TB
|
lineage2.2.2
|
None
|
SAMEA3501046
|
RR-TB
|
lineage4.8
|
None
|
ERR363456
|
Sensitive
|
lineage4.9
|
None
|
SAMEA3501067
|
RR-TB
|
lineage4.8
|
None
|
SRR1049582
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR28351408
|
Pre-XDR-TB
|
lineage2.2.1;lineage4
|
None
|
ERR181824
|
HR-TB
|
lineage4.9
|
None
|
ERR369156
|
Sensitive
|
lineage4.9
|
None
|
ERR176778
|
HR-TB
|
lineage4.9
|
None
|
ERR2513229
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18913742
|
Sensitive
|
lineage3.1.3
|
None
|
SRR7496523
|
Other
|
lineage4.7
|
None
|
SRR12708396
|
MDR-TB
|
lineage4.3.2.1
|
None
|
SRR1180312
|
Sensitive
|
lineage4.9
|
None
|
SRR6045503
|
Sensitive
|
lineage4.9
|
None
|
SRR1049725
|
Other
|
lineage4.1.2.1;lineage4.4.1
|
None
|
SRR1180410
|
Sensitive
|
lineage4.9
|
None
|
ERR363500
|
Sensitive
|
lineage4.9
|
None
|
ERR4816322
|
Other
|
lineage4.9
|
None
|
SRR1175472
|
RR-TB
|
lineage4.3.4.1
|
None
|
ERR4816762
|
Sensitive
|
lineage4.9
|
None
|
SRR16149129
|
MDR-TB
|
lineage4.2.2.1
|
None
|
ERR3283040
|
HR-TB
|
lineage4.9
|
None
|
SRR1180406
|
Sensitive
|
lineage4.9
|
None
|
ERR369162
|
Other
|
lineage4.9
|
None
|
SRR1049675
|
HR-TB
|
lineage2.2.1
|
None
|
ERR3797029
|
Other
|
lineage4.9
|
None
|
ERR978733
|
RR-TB
|
lineage4.8
|
None
|
ERR363453
|
Sensitive
|
lineage4.9
|
None
|
SRR9971114
|
Other
|
lineage2.2.1
|
None
|
SRR5007161
|
RR-TB
|
lineage4.1.1.3.1;lineage4.9
|
None
|
ERR2228910
|
Other
|
lineage4.8
|
None
|
SRR18003004
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|