Rv3596c - c.972G>C


Drug resistance types
83 Sensitive 20 RR-TB 88 HR-TB 35 MDR-TB 7 Pre-XDR-TB 2 XDR-TB 115 Other
lineage Counts
lineage Count
lineage4.9 188
lineage2.2.1 19
lineage4.3.4.2.1 2
lineage4.1.1.1 2
lineage3.1.3 2
lineage4.3.2.1 4
lineage2.2.1;lineage4 1
lineage2.2.1.1 2
La1.7;lineage3.1;lineage4 1
La1.7;lineage4.9 7
lineage3.1.2.2 1
La3;lineage4.9 8
lineage4.9;lineage9 2
lineage4 5
lineage4.1.2.1 8
lineage4.8 3
La2;lineage4.9 1
lineage3 10
lineage4.3.3 4
lineage2.2.1;lineage4.9 2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.1.1.3.1 1
lineage1.1.3.1 1
5
lineage3.1 1
lineage4.4.1.1.1 2
lineage4.3.4.2 2
lineage4.1.2 1
lineage4.6.5 2
La1.7;lineage4.9;lineage7 3
lineage4.8.1 2
lineage4.9;lineage6.1.3 1
La1.7;M.canetti;lineage4.9 4
La1.2;La1.8.1 1
lineage4.6.3;lineage4.9 2
La1;lineage4.9 2
lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.3.2;lineage4.9 1
lineage2.2 3
La2;lineage4.9;lineage9 1
lineage2;lineage4.9 1
lineage4.2.1 1
lineage4.3.1;lineage4.9;lineage6 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La1.7;lineage3;lineage4.9;lineage7 1
M.canetti;lineage2.2 2
lineage6.1.1 2
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;M.canetti;lineage4.9 1
La1.8.1 2
lineage4.3 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage6.1.3 1
lineage1.1.2 3
M.canetti;lineage4.9 1
M.canetti;lineage1 1
lineage4.4.1.1 1
lineage3.1.1 1
La1;lineage4.1.2 1
lineage4.9;lineage7 1
lineage4.2;lineage4.9 1
lineage4.3.4.1 1
lineage4.1;lineage4.9 1
lineage5.1.2 1
lineage4.6.2.2 1
lineage4.4.1.2 1
lineage2;lineage4 1
lineage4.8;lineage4.9 2
La3;lineage4 1
M.canetti;lineage4.9;lineage9 1
La1.7;lineage4.9;lineage6 1
La1.6 1
lineage1.2.1.1 1
spoligotype Counts
spoligotype Count
None 350
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR176741 Other lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
SRR11342642 MDR-TB lineage4.1.1.1 None
SRR18913742 Sensitive lineage3.1.3 None
ERR369161 Sensitive lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR14782054 Other lineage4.9 None
ERR4818624 Other lineage4.3.4.2.1 None
ERR4769439 HR-TB lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR16156817 Other lineage4.9 None
ERR363426 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR4831863 HR-TB lineage2.2.1.1 None
ERR349330 Sensitive lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR1180312 Sensitive lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
SRR18002874 MDR-TB lineage2.2.1 None
SRR5341308 HR-TB lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR3797063 Other La3;lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR1063846 HR-TB lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR2446566 Other lineage4.9 None
ERR363498 Other lineage4.9 None
SRR3675235 HR-TB lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR4829530 Pre-XDR-TB lineage4.8 None
SRR1180319 Sensitive lineage4.9 None
ERR4815471 HR-TB lineage4.9 None
SRR1180250 Other lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR6358951 Sensitive lineage4.9 None
ERR363490 Other lineage4.9 None
SRR6044875 Other lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR4819546 HR-TB lineage3 None
SRR19295647 HR-TB lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
ERR4797184 HR-TB lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
SRR5341425 Other lineage4.9 None
SRR11349186 MDR-TB lineage4.3.3 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SRR1062919 HR-TB lineage2.2.1 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR6865513 Other lineage4.1.2.1 None
ERR6359082 Other lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR363479 Other lineage4.9 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR3675209 Sensitive lineage4.9 None
ERR349266 Other lineage4.9 None
SRR5341319 Other lineage3 None
ERR736856 HR-TB lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
SRR7070157 Other lineage4.1.1.3.1 None
ERR363446 Other lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR1063896 HR-TB None
ERR4817069 RR-TB None
SRR28351442 HR-TB lineage3.1 None
ERR349300 Other lineage4.9 None
ERR6358979 HR-TB lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR10315558 RR-TB lineage2.2.1 None
ERR369162 Other lineage4.9 None
SRR6046611 Sensitive lineage4.9 None
SRR5341373 Other lineage4.9 None
ERR779852 HR-TB lineage4.9 None
SRR1181403 Other lineage4.9 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR5341330 Other lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR5341298 Other lineage4.9 None
ERR363499 Other lineage4.9 None
ERR369158 Other lineage4.9 None
ERR363421 Other lineage4.9 None
ERR369151 Other lineage4.9 None
ERR2693252 HR-TB lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
ERR9786076 Other lineage3 None
SRR3675265 Other lineage4 None
SRR18002974 Other lineage2.2.1 None
ERR9786592 Other lineage4.3.4.2 None
SRR9970980 HR-TB lineage4.1.2 None
ERR6866639 HR-TB lineage4.9 None
ERR7801175 HR-TB lineage4.6.5 None
SRR6045832 Other lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR1140724 Other lineage2.2.1 None
ERR4178309 Other lineage4.1.2.1 None
ERR3797015 HR-TB lineage4.9 None
ERR4596902 MDR-TB lineage3 None
SRR5341400 Sensitive lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR3283031 Other La3;lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR369163 Other lineage4.9 None
SRR6045548 Other lineage4.9 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR4799025 Other lineage4.8 None
SRR9971150 RR-TB lineage4.8.1 None
ERR3275709 HR-TB lineage3 nl
SRR5341384 HR-TB lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR4818561 Sensitive lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR1063855 Other lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR6046897 Sensitive lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR1181349 Sensitive lineage4 None
SRR7240033 Other La1.2;La1.8.1 None
SRR1181283 Sensitive lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR3283011 Other La3;lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR349299 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR10808805 Other La1;lineage4.9 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
SRR6046210 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR5341387 Other lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
ERR751326 Other lineage4.9 None
ERR405209 Sensitive La1.7;lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR6045706 Other lineage4.9 None
ERR323107 HR-TB lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
ERR4796254 Other lineage4.9 None
ERR323037 Other lineage4.9 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
SRR1183111 HR-TB lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR736831 Other lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
SRR10809074 HR-TB lineage4.9 None
ERR6359069 HR-TB lineage4.9 None
ERR363502 Other lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR1180444 Sensitive lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR5341455 Sensitive lineage4.9 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
ERR363447 Other lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR736834 HR-TB lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR6044780 Sensitive lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR369159 Other lineage4.9 None
ERR363456 Sensitive lineage4.9 None
SRR8692905 Sensitive None
ERR987722 MDR-TB None
ERR137286 Other lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR4818710 Sensitive lineage4.9 None
ERR4816113 Sensitive lineage4.1.1.1 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR363449 Other lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR3675385 Other La1.7;lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR20632814 Sensitive lineage4.9 None
ERR2513724 Sensitive lineage4.3.2.1 None
ERR4798099 HR-TB lineage4.9 None
ERR9787014 RR-TB lineage6.1.1 None
SRR1159378 Other lineage4.9 None
SRR6045217 Other lineage4.9 None
ERR3797065 RR-TB lineage4.9 None
ERR349296 Sensitive lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR4798504 RR-TB lineage3 None
SRR1791747 Other La1.8.1 None
SRR20969708 HR-TB lineage2.2 None
SRR3675492 Other La1.7;lineage4.9 None
ERR7801176 RR-TB lineage4.6.5 None
SRR6046141 Other lineage4.9 None
ERR4769433 RR-TB lineage4.9 None
SRR26159047 RR-TB lineage4.6.3;lineage4.9 None
SRR1172310 MDR-TB lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR3275941 RR-TB lineage4.3 nl
SRR5153091 HR-TB lineage4.3.3 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR067712 Sensitive lineage4.9 None
ERR323115 Sensitive lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR9787256 Other lineage6.1.3 None
ERR4818536 Other lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
ERR349265 Other lineage4.9 None
ERR373946 Other lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR5341310 Other lineage1.1.2 None
ERR6865502 Sensitive lineage4 None
SRR1049674 HR-TB lineage2.2.1 None
ERR3799304 RR-TB lineage6.1.1 None
SRR7236177 Other La1.8.1 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR323066 HR-TB lineage4.9 None
ERR124636 HR-TB lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
SRR6511621 HR-TB lineage4.9 None
ERR349264 Other lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR867570 RR-TB lineage4.9 None
ERR1035122 HR-TB lineage4.9 None
ERR323062 HR-TB lineage4.9 None
ERR485006 HR-TB lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
SRR3675585 HR-TB lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR108471 HR-TB lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
SRR11342698 RR-TB lineage4.4.1.1 None
ERR3283014 Other La3;lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR363509 Sensitive lineage4.9 None
SRR3675246 Other lineage4.9 None
ERR4178226 Sensitive lineage4 None
SRR6045050 Sensitive lineage4.3.2.1 None
ERR363453 Other lineage4.9 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR16156775 Other lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR1180399 Sensitive lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
SRR1158918 Other lineage4.9 None
SRR10808730 Other lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR373947 Other lineage4.9 None
SRR5341467 Other lineage4.9 None
ERR4798431 Other lineage4.1;lineage4.9 None
SRR1173777 Sensitive lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
ERR4819383 RR-TB lineage4.9 None
ERR400538 RR-TB lineage5.1.2 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR1180413 Sensitive lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR502510 HR-TB lineage4.9 None
ERR363500 Other lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
ERR473323 HR-TB lineage4.9 None
ERR1023502 MDR-TB lineage2;lineage4 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR6045503 Other lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
ERR473334 HR-TB lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR502511 HR-TB lineage4.9 None
ERR3283028 Other La3;lineage4 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR4796577 HR-TB None
ERR245675 Sensitive lineage1.1.2 None
ERR400529 Other lineage3 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR4797474 Other lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR4817998 Other lineage3 None
SRR1180300 Sensitive lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
SRR10993951 RR-TB La1.6 None
ERR373945 Other lineage4.9 None
SRR6046385 Sensitive lineage4.9 None
ERR4819357 Sensitive lineage4.9 None
ERR2513121 Sensitive lineage3.1.3 None
SRR11342673 RR-TB lineage4.3.4.2 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
SRR13423649 Other lineage2.2.1 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR369157 Sensitive lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
SRR1181256 Other lineage4.9 None
ERR702405 HR-TB lineage4.9 None
ERR4816964 HR-TB lineage4.9 None
ERR3797079 Sensitive lineage4.9 None
SRR3675292 Sensitive lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
ERR363474 Sensitive lineage4.9 None
SRR10315466 RR-TB lineage2.2.1 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR6866410 HR-TB lineage4.9 None
ERR4814734 Other lineage1.2.1.1 None
SRR20969731 Other lineage2.2.1 None
ERR363506 Sensitive lineage4.9 None