Rv0667 - c.1860G>C
Drug resistance types
81 Sensitive
17 RR-TB
91 HR-TB
34 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
89 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 176 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage6.1.3 | 1 |
| lineage4.9;lineage9 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage1;lineage4.9 | 2 |
| lineage3.1.2.2 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.5 | 1 |
| La3;lineage4.9 | 8 |
| La1.7;lineage4.9 | 6 |
| lineage4.9;lineage7 | 1 |
| La2;lineage4.9 | 2 |
| lineage4.2.1 | 1 |
| lineage2.2.1 | 16 |
| lineage4.3.3 | 1 |
| lineage2.2.1.1 | 4 |
| lineage4 | 7 |
| La1;lineage4.1.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.8;lineage4.9 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La3;lineage4 | 1 |
| 3 | |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage4.4.1.1.1 | 1 |
| lineage6.1.1 | 2 |
| La2;lineage2.2 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 1 |
| La1.8.1 | 2 |
| lineage1.1.1 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| lineage4.4.1.1 | 1 |
| lineage2;lineage4.9 | 1 |
| La1.7.1;lineage4.9 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.2;lineage4.9 | 3 |
| lineage4.1;lineage4.9 | 2 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.1.2.1 | 4 |
| lineage1.2.2.1 | 4 |
| lineage4.8 | 2 |
| lineage1.1.2 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.3.2.1 | 1 |
| La1;lineage4.9 | 2 |
| lineage4.3.2;lineage4.9 | 1 |
| La1.7.X-unk4 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage2.1;lineage4.9 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| lineage4.4.1.2 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage3 | 6 |
| lineage5.1.4 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.2 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.3.4 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La1.7.1 | 1 |
| lineage4.1.2 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 317 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341345 | Sensitive | lineage4.9 | None | ERR987729 | MDR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR1181351 | Sensitive | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR11466072 | Sensitive | lineage4.3.4.2.1 | None | ERR363426 | Sensitive | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR4811031 | Other | lineage4.5 | None | SRR3675580 | Sensitive | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR3675235 | HR-TB | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR4815471 | HR-TB | lineage4.9 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR3675387 | Other | lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | ERR363490 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR363453 | Other | lineage4.9 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | ERR369156 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | ERR212125 | HR-TB | lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR736834 | HR-TB | lineage4.9 | None | SRR1183144 | RR-TB | lineage2.2.1 | None | ERR6866022 | HR-TB | lineage4.8;lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR6045503 | Other | lineage4.9 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR6044780 | Sensitive | lineage4.9 | None | ERR349266 | Other | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR369159 | Other | lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR363446 | Other | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR6045359 | HR-TB | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR12708416 | Sensitive | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR4797474 | Other | lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | ERR363449 | Other | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR4024991 | HR-TB | lineage4.8;lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR4798099 | HR-TB | lineage4.9 | None | ERR363499 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | ERR702405 | HR-TB | lineage4.9 | None | ERR9787014 | RR-TB | lineage6.1.1 | None | ERR4816964 | HR-TB | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR1791747 | Other | La1.8.1 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR6866410 | HR-TB | lineage4.9 | None | SRR7535082 | Other | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR4819314 | HR-TB | lineage1.1.1 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR9119669 | MDR-TB | lineage4.9 | None | ERR067699 | HR-TB | La1;lineage2;lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR400345 | Other | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR1180312 | Sensitive | lineage4.9 | None | ERR3799304 | RR-TB | lineage6.1.1 | None | SRR7236177 | Other | La1.8.1 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR323066 | HR-TB | lineage4.9 | None | ERR124636 | HR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR3797063 | Other | La3;lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR4811030 | Other | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR323062 | HR-TB | lineage4.9 | None | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR363498 | Other | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR6045706 | Other | lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR323107 | HR-TB | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | ERR4796254 | Other | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR5341432 | Other | La1.7;lineage4.9;lineage7 | None | ERR4816478 | HR-TB | lineage4 | None | SRR10809074 | HR-TB | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR6359069 | HR-TB | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR6044876 | Sensitive | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR1180147 | RR-TB | lineage2.2.1.1 | None | ERR4797184 | HR-TB | lineage4.9 | None | ERR4828872 | RR-TB | lineage4.2;lineage4.9 | None | SRR1158918 | Other | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR4798431 | Other | lineage4.1;lineage4.9 | None | ERR363500 | Other | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR1180172 | RR-TB | lineage2.2.1 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR3283021 | MDR-TB | lineage4.9 | None | ERR363479 | Other | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | ERR736856 | HR-TB | lineage4.9 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR502511 | HR-TB | lineage4.9 | None | ERR181824 | MDR-TB | lineage4.9 | None | SRR28351584 | HR-TB | lineage2.2.1 | None | ERR987722 | MDR-TB | None | SRR6045795 | Other | lineage2.2.1 | None | ERR6866807 | RR-TB | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR6358979 | HR-TB | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR369158 | Other | lineage4.9 | None | ERR2693252 | HR-TB | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR3675292 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR11466460 | Sensitive | lineage1.2.2.1 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR369163 | Other | lineage4.9 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR5341313 | Other | La1.7;lineage4.9;lineage7 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR26399239 | Sensitive | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR349265 | Other | lineage4.9 | None | ERR373946 | Other | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR6865502 | Sensitive | lineage4 | None | SRR1181349 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4.9 | None | SRR6046397 | RR-TB | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR11662694 | Other | lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR12882576 | Sensitive | lineage1.2.2.1 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR5341308 | HR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR400326 | Other | lineage4.9 | None | ERR349264 | Other | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR1035122 | HR-TB | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | SRR12882569 | Sensitive | lineage1.2.2.1 | None | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | SRR6046210 | Other | lineage4.9 | None | SRR3675585 | HR-TB | lineage4.9 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR3283014 | Other | La3;lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR3675246 | Other | lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | ERR502510 | HR-TB | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | ERR1063896 | HR-TB | None | SRR28351347 | Other | lineage3 | None | SRR28044873 | Pre-XDR-TB | lineage3 | None | ERR349300 | Other | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR779852 | HR-TB | lineage4.9 | None | ERR4817998 | Other | lineage3 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR373945 | Other | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4818252 | HR-TB | lineage4.1.1.2 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR6046295 | MDR-TB | lineage4.2;lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | SRR10808668 | Other | lineage2.2.1 | None | ERR363421 | Other | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1159378 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR11466485 | Sensitive | lineage1.2.2.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR4798504 | RR-TB | lineage3 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR4596902 | MDR-TB | lineage3 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283031 | Other | La3;lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR26159047 | RR-TB | lineage4.6.3;lineage4.9 | None | SRR1172310 | MDR-TB | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None |
|---|
