Rv0006 - c.1692C>T
Drug resistance types
75 Sensitive
1 RR-TB
6 HR-TB
7 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
33 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 8 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.5 | 2 |
| lineage3 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage4.9 | 71 |
| lineage4 | 6 |
| lineage2.2.1;lineage4 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage2.2 | 2 |
| La3;lineage4.9 | 4 |
| lineage4.1.2.1 | 2 |
| lineage4.3.3 | 1 |
| lineage4.7 | 1 |
| lineage1.1.2 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.2.1 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.8 | 5 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.3.2.1 | 1 |
| lineage6.2.3 | 1 |
| lineage1.1.1;lineage4 | 1 |
| lineage1.1 | 1 |
| lineage4.1.1.3;lineage4.9 | 1 |
| lineage4.1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 124 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR9971114 | Other | lineage2.2.1 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4817998 | Other | lineage3 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR3675580 | Sensitive | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR3675279 | Sensitive | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR363437 | Sensitive | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | SRR29097058 | Other | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675387 | Other | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR11083155 | Sensitive | lineage4.7 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR28045220 | Sensitive | lineage1.1.2 | None | ERR751825 | Sensitive | lineage4.5 | th | ERR373947 | Other | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR4830150 | Sensitive | lineage4.1 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | SRR3675477 | Sensitive | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR369162 | Other | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR369163 | Sensitive | lineage4.9 | None | ERR3275450 | Other | lineage4 | None | ERR369158 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | ERR1034960 | Sensitive | lineage4.8 | za | SRR3675522 | Other | lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR3675292 | Sensitive | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR363490 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR28859997 | Sensitive | lineage4.8 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR7911523 | Sensitive | lineage4.8 | za | ERR363426 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR4809193 | RR-TB | lineage4.8 | za | SRR11662694 | Other | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | SRR29096399 | Sensitive | lineage2.2.1 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | SRR6046802 | Other | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | ERR363499 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR3675247 | Other | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | ERR363447 | Other | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR26124837 | Sensitive | lineage6.2.3 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR349296 | Sensitive | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR5709792 | Pre-XDR-TB | lineage1.1 | th | ERR2517475 | Other | lineage4 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | ERR363500 | Sensitive | lineage4.9 | None | SRR6896176 | Sensitive | lineage4.8 | None | ERR4818811 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None |
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