Rv0668 - c.1036_1038delAGGinsCGC


Drug resistance types
140 Sensitive 12 RR-TB 80 HR-TB 23 MDR-TB 11 Pre-XDR-TB 2 XDR-TB 65 Other
lineage Counts
lineage Count
lineage2.2.1 32
lineage4.9 144
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La3;lineage4.9 5
lineage4.1;lineage4.9 2
lineage4.4.1.1 2
lineage2.2.2 13
lineage2.2;lineage4 2
lineage4.1.1.2 1
La1.7;lineage4.9 8
La1;lineage2;lineage4.9 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage2.1;lineage4.3.2;lineage4.9 1
M.canetti;lineage4.9 3
La1.7.1;lineage4.9 1
lineage3 12
lineage4.3.3;lineage4.8 4
lineage4 6
lineage2.2;lineage4.9 1
lineage1.1.2 2
lineage4.1.1.3 3
La1.2 1
lineage2.2.1.1 2
lineage1.1.1 2
lineage5.2 2
lineage4.1.2.1 6
lineage4.2;lineage4.9 2
lineage4.1;lineage4.8 1
lineage1.2.1.2 1
lineage3.1.3 1
lineage4.1.1.3;lineage4.9 2
lineage4.6.2.2 2
lineage4.9;lineage6.3 1
lineage4.2.1 2
lineage4.8 3
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage2.2.2;lineage4 1
lineage4.2;lineage4.6.3;lineage4.9.1 1
lineage4.3.4.2.1 2
lineage4.3.3 4
lineage2;lineage4.9 1
La2;lineage4.9 1
lineage2.2.1;lineage4.9 1
La1.7 1
lineage1;lineage4.9 2
lineage4.6.1.2 2
lineage4.2;lineage4.8.1;lineage4.9 1
lineage1.2.2.2 1
lineage2.2.1;lineage4 2
La1;lineage4.1.2 1
4
La1.2.BCG 1
lineage4.8;lineage4.9 2
lineage4.5 3
lineage4.7 1
lineage4.4.1.1.1 1
La1.7;M.canetti;lineage4.9 2
lineage4.6.3;lineage4.9;lineage6.3 1
lineage1.2.1.1 1
lineage1.1.3.1 1
lineage2.2.2;lineage4.9 1
lineage4.4.1.2 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.6.3;lineage4.9 1
lineage4.3.4.1 2
lineage2.2.1;lineage2.2.2 1
M.canetti;lineage2.2 2
lineage4.3.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3.1.1 1
lineage4.2;lineage4.6.3;lineage4.9 1
La1.8.1 1
lineage4.9;lineage6.1.3 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4.3.2.1 1
M.canetti;lineage4.2;lineage4.9 1
La3;lineage4 1
spoligotype Counts
spoligotype Count
None 333
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SAMN02360580 HR-TB lineage2.2.1 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR363490 Sensitive lineage4.9 None
SRR12708415 HR-TB lineage2.2.1 None
ERR369161 Sensitive lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
ERR108125 RR-TB lineage4.9 None
SRR5341425 Other lineage4.9 None
ERR926160 Sensitive lineage4.9 None
ERR502510 Sensitive lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
ERR373945 Sensitive lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
SRR3675235 Sensitive lineage4.9 None
SRR1047996 MDR-TB lineage2.2.2 None
SRR1048868 Pre-XDR-TB lineage2.2.2 None
SRR1048885 HR-TB lineage2.2;lineage4 None
ERR4819051 Sensitive lineage4.9 None
ERR363449 Sensitive lineage4.9 None
ERR363474 Sensitive lineage4.9 None
ERR4818252 Sensitive lineage4.1.1.2 None
ERR124636 Sensitive lineage4.9 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1013570 Pre-XDR-TB lineage2.2.1 None
ERR3283047 Sensitive La3;lineage4.9 None
SRR10808399 Sensitive lineage4.9 None
SRR1184308 Sensitive lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR1013614 Sensitive lineage2.2.1 None
SRR6511621 Sensitive lineage4.9 None
ERR400336 Sensitive lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR363499 Sensitive lineage4.9 None
ERR990545 Other lineage3 None
SRR1013603 HR-TB lineage2.2.1 None
SRR1062920 MDR-TB lineage4.3.3;lineage4.8 None
SRR1181349 Sensitive lineage4 None
ERR1035122 Sensitive lineage4.9 None
ERR4819546 HR-TB lineage3 None
SRR3675247 Other lineage4.9 None
SRR3675441 Other lineage4.9 None
SRR1047993 HR-TB lineage2.2.1 None
SRR1049026 HR-TB lineage2.2;lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
SRR16156697 RR-TB lineage2.2.1 None
ERR1034634 HR-TB lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
ERR9786164 RR-TB lineage4.1.1.3 None
ERR349266 Sensitive lineage4.9 None
ERR373946 Sensitive lineage4.9 None
SRR23961549 Other La1.2 None
SRR1181351 Sensitive lineage4.9 None
SRR1183144 Other lineage2.2.1 None
SRR3675585 Sensitive lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
SRR14066533 Sensitive lineage1.1.1 None
ERR9119500 MDR-TB lineage5.2 None
SRR20632814 Sensitive lineage4.9 None
ERR369159 Sensitive lineage4.9 None
ERR405209 Sensitive La1.7;lineage4.9 None
SRR1048981 HR-TB lineage3 None
ERR181824 HR-TB lineage4.9 None
ERR349264 Sensitive lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR4829606 Sensitive lineage4.1.2.1 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
SAMN02360563 Pre-XDR-TB lineage2.2.2 None
SRR1049007 HR-TB lineage2.2.2 None
ERR4797474 Sensitive lineage4.9 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR1181289 Other lineage2.2.1 None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR18913742 Sensitive lineage3.1.3 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1013604 HR-TB lineage2.2.1 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
SRR1048980 HR-TB lineage3 None
SRR1049004 HR-TB lineage2.2.2 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR1180410 Sensitive lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR1063858 HR-TB lineage4.9 None
ERR2512770 Sensitive lineage4.2.1 None
SRR6045010 Sensitive lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR1013609 Sensitive lineage4 None
SRR1048997 HR-TB lineage2.2.1 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR926157 Sensitive lineage4.9 None
ERR12015084 Other lineage4.8 None
SRR6045359 Sensitive lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
ERR363453 Sensitive lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR11252736 Other lineage4.9 None
SRR1013597 Sensitive lineage2.2.2;lineage4 None
SRR1140574 MDR-TB lineage4.3.3;lineage4.8 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
SRR1180300 Sensitive lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
SRR1180391 Sensitive lineage4.9 None
SRR3675580 Sensitive lineage4.9 None
SRR1048993 HR-TB lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
SRR12708384 Sensitive lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
ERR6866410 Sensitive lineage4.9 None
SRR5341455 Sensitive lineage4.9 None
ERR6358979 Other lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
SRR12708371 HR-TB lineage4.1.1.3 None
ERR323107 Sensitive lineage4.9 None
ERR349300 Sensitive lineage4.9 None
ERR4830353 Other La1.7 None
SRR3675267 Other La1.7;lineage4.9 None
ERR736856 Sensitive lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
SRR10809074 Sensitive lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
ERR3283014 Sensitive La3;lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR1013607 HR-TB lineage2.2.2 None
ERR4797184 Sensitive lineage4.9 None
ERR4798504 RR-TB lineage3 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR6359069 Sensitive lineage4.9 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
SRR3675248 Other lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
SRR6046245 Other lineage4.9 None
ERR2446382 Other lineage4 None
SRR3675260 Sensitive lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
ERR3283032 Other lineage4.9 None
ERR363509 Sensitive lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
ERR971389 Sensitive lineage4.9 None
ERR4769493 Other lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR1013618 RR-TB lineage2.2.1;lineage4 None
SRR1180446 Other lineage4.9 None
SRR1180172 Other lineage2.2.1 None
SRR5341308 Sensitive lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR736834 Sensitive lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
ERR9786656 Sensitive lineage4.1.2.1 None
SRR1013567 Pre-XDR-TB lineage2.2.2 None
SRR9971112 Other lineage2.2.1 None
SRR12708416 Sensitive None
ERR4798262 HR-TB La1.2.BCG None
ERR736831 Other lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
SRR9971122 MDR-TB lineage4.8 None
ERR2517475 Other lineage4 None
ERR176778 HR-TB lineage4.9 None
ERR349330 Sensitive lineage4.9 None
ERR363446 Sensitive lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
ERR926156 Sensitive lineage4.9 None
ERR9786076 Sensitive lineage3 None
SRR17567917 RR-TB lineage4.4.1.1 None
ERR4819422 HR-TB lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SAMN02360570 Pre-XDR-TB lineage2.2.1 None
SRR1013621 Pre-XDR-TB lineage2.2.2 None
SRR1048996 Sensitive lineage4.5 None
SRR7496523 Other lineage4.7 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
ERR4769530 RR-TB lineage4.9 None
SRR3675477 Sensitive lineage4.9 None
ERR4796254 Sensitive lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR4819314 Other lineage1.1.1 None
ERR4819241 Other lineage4.9 None
SAMN02360577 HR-TB lineage3 None
SRR1144744 HR-TB lineage2.2.1 None
SRR1158918 Sensitive lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
ERR176651 Other lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
SRR12708414 HR-TB lineage2.2.1 None
SRR15315797 RR-TB lineage2.2.1 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR1049676 MDR-TB lineage4.3.3;lineage4.8 None
ERR369163 Sensitive lineage4.9 None
ERR1063896 Sensitive None
SRR3675522 Other lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR502511 Sensitive lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
SRR3675501 Other La1.7;lineage4.9 None
SRR6046210 Other lineage4.9 None
SRR5341296 Sensitive lineage4.9 None
SRR18511647 Sensitive lineage2.2.1 None
ERR4821276 Sensitive lineage3 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR702405 Sensitive lineage4.9 None
SRR1013596 Sensitive lineage3 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR9029360 MDR-TB lineage2.2.1 None
SAMN02360586 HR-TB lineage2.2.1 None
ERR2517457 Sensitive lineage3 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR363421 Sensitive lineage4.9 None
ERR363479 Sensitive lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR4798099 Other lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4814734 Other lineage1.2.1.1 None
ERR6359066 HR-TB lineage4.9 None
ERR4816964 Sensitive lineage4.9 None
SRR1013553 MDR-TB lineage2.2.2 None
SRR1180420 Sensitive lineage4.9 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR4178226 Sensitive lineage4 None
SRR1013613 Sensitive lineage2.2.1 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR6865513 Other lineage4.1.2.1 None
SAMN02360585 HR-TB lineage4.5 None
SRR1013569 Pre-XDR-TB lineage2.2.1 None
SRR12708392 Other lineage2.2.1 None
SRR6044942 HR-TB lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR4596902 MDR-TB lineage3 None
SAMN02360591 Pre-XDR-TB lineage2.2.2 None
SRR12708372 Sensitive lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR926154 Sensitive lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR1023509 Other lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR1049027 HR-TB lineage2.2.2;lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR3675488 Other La1.7;lineage4.9 None
ERR3797065 RR-TB lineage4.9 None
ERR779852 Sensitive lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR369157 Sensitive lineage4.9 None
SRR5341298 Sensitive lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR4024991 Other lineage4.8;lineage4.9 None
ERR3797081 Sensitive lineage4.9 None
SRR1013633 MDR-TB lineage2.2.2 None
SRR1183965 Sensitive lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR12708419 Other lineage4.3.3 None
ERR9786843 Other None
SRR1048985 HR-TB lineage2.2.1 None
SRR1048992 HR-TB lineage2.2;lineage4 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR5341387 Other lineage4.9 None
ERR234659 Other None
ERR4769442 Sensitive lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
SRR1175491 MDR-TB lineage4.3.4.1 None
SRR1048969 HR-TB lineage2.2.1;lineage2.2.2 None
SRR1048987 HR-TB lineage2.2.1 None
ERR4819462 Sensitive lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR1180355 Sensitive lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR1181256 Other lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR1144809 HR-TB lineage2.2.1 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR1048965 HR-TB lineage2.2.1 None
ERR926165 Sensitive lineage4.9 None
SRR1173310 Other lineage3.1.1 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
SRR6045503 Sensitive lineage4.9 None
ERR4817915 Other lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
ERR6866807 Other lineage4.9 None
ERR363500 Sensitive lineage4.9 None
SRR7236177 Other La1.8.1 None
ERR926155 Sensitive lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR1049677 MDR-TB lineage4.3.3;lineage4.8 None
SRR1175472 RR-TB lineage4.3.4.1 None
SRR1180137 Other lineage2.2.1 None
SRR14782539 MDR-TB lineage4.2.1 None
ERR4816762 Sensitive lineage4.9 None
ERR323066 Sensitive lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
SRR10808668 Sensitive lineage2.2.1 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
ERR4815079 RR-TB lineage3 None
ERR3283028 Other La3;lineage4 None
SRR29772570 Other lineage4.9 None
ERR363498 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1013622 Pre-XDR-TB lineage2.2.2 None
SRR5153091 HR-TB lineage4.3.3 None
SRR3675292 Sensitive lineage4.9 None
SRR5341310 Other lineage1.1.2 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None