Rv3596c - c.723G>A
Drug resistance types
58 Sensitive
4 RR-TB
13 HR-TB
17 MDR-TB
1 Pre-XDR-TB
1 XDR-TB
93 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 3 |
| lineage4.1.2.1 | 10 |
| lineage2.2.1 | 10 |
| lineage4.9 | 81 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage2.1;lineage4.9;lineage6.3 | 5 |
| lineage4.1;lineage4.8 | 2 |
| lineage4.3.4.2.1 | 3 |
| lineage4 | 4 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage4.3.3 | 1 |
| lineage4.1;lineage4.9 | 2 |
| lineage4.9;lineage6.3 | 3 |
| lineage5.1.4 | 1 |
| 5 | |
| lineage1.2.2.2 | 8 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage4.3 | 1 |
| lineage4.1.1.3 | 2 |
| La3;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage2.2.1;lineage3 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage4.4.1.1 | 2 |
| lineage2.1;lineage4.9 | 2 |
| lineage1;lineage4.9 | 1 |
| lineage4.6.2.2 | 3 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage4.3.2.1 | 1 |
| La3;lineage2 | 1 |
| lineage2.1 | 2 |
| La3;lineage2.1;lineage4.9 | 2 |
| La3;lineage2.2.1 | 1 |
| lineage1.1.1;lineage4 | 1 |
| lineage4.1.1.1 | 3 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.8 | 2 |
| lineage6.3.1 | 1 |
| lineage2.2 | 2 |
| lineage4.2.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.5 | 1 |
| lineage4.1.2 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| La3;lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 187 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2513259 | Other | lineage3 | None | ERR4025057 | Sensitive | lineage4.1.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR1175508 | Sensitive | lineage4.9 | None | ERR553132 | MDR-TB | lineage4.1.2.1 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR363498 | Other | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | ERR9786525 | RR-TB | lineage4.1;lineage4.8 | None | SRR6045706 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675387 | Other | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR19295647 | HR-TB | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR373947 | Other | lineage4.9 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR363500 | Other | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | ERR11466146 | Other | lineage4.3.4.2.1 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | SRR22249732 | MDR-TB | lineage2.2.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR363446 | Other | lineage4.9 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR9786604 | Other | None | SRR28044443 | Other | lineage1.2.2.2 | None | SRR12708416 | Sensitive | None | SRR28119777 | Other | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR26056410 | Sensitive | lineage4.3 | None | SRR6797784 | Other | lineage1.2.2.2 | None | ERR502908 | HR-TB | lineage2.2.1 | None | SRR3675292 | Sensitive | lineage4.9 | None | ERR11465025 | Other | lineage4.1.1.3 | None | SRR26399973 | Other | La3;lineage4.9 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR1169194 | Other | lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR363506 | Sensitive | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR369163 | Other | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | ERR502912 | Other | lineage2.2.1 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR12882314 | RR-TB | lineage1.2.2.2 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | SRR6789621 | Other | lineage4.9 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | SRR6045371 | Other | lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | SRR12708384 | Sensitive | lineage4.9 | None | ERR4553423 | MDR-TB | lineage1.2.2.2 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | ERR363453 | Other | lineage4.9 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | SRR3675247 | Other | lineage4.9 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | ERR4798431 | Other | lineage4.1;lineage4.9 | None | SRR26937071 | MDR-TB | La3;lineage2.2.1 | None | ERR6865442 | Sensitive | lineage4.1.2.1 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR2517475 | Other | lineage4 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR6045503 | Other | lineage4.9 | None | ERR349266 | Other | lineage4.9 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR9786671 | Other | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR363449 | Other | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR373945 | Other | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR4817893 | Other | La3;lineage4.8 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR363499 | Other | lineage4.9 | None | ERR363421 | Other | lineage4.9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR349296 | Sensitive | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR4178309 | Other | lineage4.1.2.1 | None | SRR6046245 | Other | lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR373946 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | SRR26159043 | Other | lineage4.9 | None | ERR2513470 | Other | lineage4.2.2.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR4811031 | Other | lineage4.5 | None | SRR3675580 | Sensitive | lineage4.9 | None | ERR4811030 | Other | lineage4.9 | None | SRR3675477 | Sensitive | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | ERR349264 | Other | lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR1165699 | Other | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR363490 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR12015083 | Other | La3;lineage4.8 | None | ERR363447 | Other | lineage4.9 | None | ERR4818347 | Other | lineage4.1.2 | None | ERR11465024 | Other | lineage4.1.1.3 | None | SRR3675508 | MDR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR7362041 | MDR-TB | lineage1.2.2.2 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR363479 | Other | lineage4.9 | None | ERR9786645 | Other | lineage4.6.2.2 | None | SRR20970016 | Other | lineage2.2 | None | ERR369159 | Other | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR25827682 | Other | None | ERR4407463 | HR-TB | None | SRR28044806 | RR-TB | lineage1.2.2.2 | None | SRR28119805 | Other | lineage4.9 | None | ERR349300 | Other | lineage4.9 | None | ERR4817998 | Other | lineage3 | None | ERR3132117 | MDR-TB | lineage1.2.2.2 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR4815292 | Other | lineage1.2.2.2 | gb | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | ERR702406 | Other | lineage2.1 | None |
|---|
