lineage | Count |
---|---|
lineage4.3.3 | 1 |
lineage4.9 | 45 |
lineage4 | 48 |
5 | |
lineage4.2.1 | 2 |
lineage2.2.1 | 6 |
lineage3 | 3 |
lineage4.8 | 2 |
lineage1.1.2 | 2 |
lineage4.1.2.1 | 4 |
lineage5.1.2 | 1 |
La1.3 | 4 |
lineage4.9;La1.3 | 1 |
lineage2.2.2 | 1 |
lineage4.4.1.1.1 | 2 |
lineage4.9;lineage2.2 | 1 |
lineage2.2 | 1 |
lineage2 | 1 |
La1.7.1 | 1 |
lineage4.3.4.2.1 | 1 |
spoligotype | Count |
---|---|
None | 132 |
ID | Drug resistance | Lineage | Country iso2 | ERR4818583 | Other | lineage4.3.3 | None | ERR4818536 | Other | lineage4.9 | None | ERR4821057 | HR-TB | lineage4 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | SRR6045503 | HR-TB | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6044838 | Other | lineage4.9 | None | ERR4821176 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046385 | Other | lineage4.9 | None | SRR6045399 | Other | None | SRR6046376 | Other | lineage3 | None | SRR6046802 | Other | lineage4 | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | ERR067699 | HR-TB | lineage4 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6982542 | Sensitive | lineage2.2.1 | None | SRR6046839 | Other | lineage4.9 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR323107 | Other | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR1063855 | Other | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR405191 | Other | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4769552 | Other | La1.3 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4798431 | HR-TB | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR6865513 | Other | lineage4.1.2.1 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1141261 | MDR-TB | lineage4.9 | None | SRR1172717 | Other | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173740 | Other | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | ERR4815310 | Other | None | SRR3675265 | Other | lineage4 | None | ERR4815550 | Other | lineage4 | None | SRR3675292 | Sensitive | lineage4 | None | ERR4817998 | Other | lineage3 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4818811 | Pre-XDR-TB | lineage2.2.1 | None |
---|