Rv1630 - c.450C>G
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
117 Sensitive
7 RR-TB
43 HR-TB
10 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
74 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7;lineage4.9;lineage7 | 3 |
| La2;lineage2.2 | 1 |
| lineage4.9 | 141 |
| La1.2.BCG | 3 |
| lineage2.2.1 | 18 |
| lineage4 | 7 |
| lineage4.1.2.1 | 6 |
| lineage4.3.2.1 | 4 |
| lineage4.8 | 2 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage1.1;lineage4.1.2.1 | 1 |
| M.canetti;lineage1 | 1 |
| La1.2.BCG;lineage4.9 | 1 |
| lineage4.3 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| La1.7;lineage4.9 | 5 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage4.7 | 2 |
| La1.7 | 1 |
| lineage4.5 | 1 |
| lineage1.1.1.1 | 4 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.1.1.3 | 1 |
| lineage1;lineage4.9 | 2 |
| lineage4.1;lineage4.9 | 2 |
| lineage4.4.1.1 | 1 |
| lineage3.1.2.1 | 1 |
| La1.3 | 1 |
| 4 | |
| lineage4.3.4 | 2 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage2.2.2 | 1 |
| lineage3 | 5 |
| lineage4.3.3 | 4 |
| lineage4.4 | 1 |
| lineage2;lineage4 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| lineage5.1.2 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.1.1.1 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage6.1.3 | 2 |
| lineage1.2.2.2 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.2.1 | 1 |
| lineage4.4.2 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage1.1.1;lineage4 | 1 |
| lineage5.1.4 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 255 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR6046839 | Other | lineage4.9 | None | SRR1915479 | Other | La1.2.BCG | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR3675265 | Other | lineage4 | None | SRR12708384 | Sensitive | lineage4.9 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR6046210 | Other | lineage4.9 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR736848 | Other | lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR212123 | Other | lineage4.9 | None | ERR2514327 | HR-TB | lineage4.8 | None | SRR11662694 | Other | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR4810624 | HR-TB | lineage2.2.1 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | ERR4814683 | Sensitive | lineage1.1;lineage4.1.2.1 | None | SRR7496471 | Sensitive | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR1915481 | Other | La1.2.BCG;lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | SRR6046802 | Other | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR867542 | HR-TB | lineage4.3 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675387 | Other | lineage4.9 | None | SRR26399265 | Other | lineage2.2.1 | None | ERR4769493 | Other | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR29050928 | Other | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | ERR3797081 | Sensitive | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR6045503 | Sensitive | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR3675222 | Other | La1.7 | None | ERR369162 | Other | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR9119401 | Sensitive | lineage1.1.1.1 | None | ERR3275450 | Other | lineage4 | None | SRR3675522 | Other | lineage4.9 | None | SRR3675580 | Sensitive | lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341400 | Sensitive | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675292 | Sensitive | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR108125 | RR-TB | lineage4.9 | None | SRR5341293 | Sensitive | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | SRR3675577 | Sensitive | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR4769495 | Other | La1.3 | None | ERR4797201 | Other | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR161037 | Other | lineage4.9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR400326 | Other | lineage4.9 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR6044876 | Sensitive | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR4796351 | Sensitive | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR3675318 | Other | lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | ERR2446382 | Other | lineage4 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | ERR926163 | Other | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR926164 | Other | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | ERR363447 | Other | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR6046485 | Other | lineage4.9 | None | SRR1915487 | Other | La1.2.BCG | None | ERR736831 | Other | lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR4830399 | Sensitive | lineage1.1.1.1 | vn | ERR2517475 | Other | lineage4 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR363500 | Sensitive | lineage4.9 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR3797029 | Other | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR363490 | Sensitive | lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR3675279 | Sensitive | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR363437 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR26399303 | Sensitive | lineage1.1.1.1 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR6865502 | Sensitive | lineage4 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR29050859 | Other | lineage4.9 | None | ERR2513438 | Sensitive | lineage4.1.2.1 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | SRR26159043 | Other | lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | ERR9787153 | Other | lineage6.1.3 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | ERR9786076 | Sensitive | lineage3 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR349298 | Sensitive | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | SRR7070496 | Sensitive | lineage4.7 | None | ERR212138 | HR-TB | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR20969542 | Other | lineage4.4.2 | None | ERR4817998 | Other | lineage3 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR26399772 | Sensitive | lineage1.1.1.1 | None | ERR1023236 | Other | lineage6.1.3 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR1915485 | Other | La1.2.BCG | None | SRR12708416 | Sensitive | None | SRR5341396 | Other | lineage3;lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | SRR28044634 | Other | lineage3 | None | ERR234659 | Other | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR1140724 | Other | lineage2.2.1 | None | SRR6045555 | Other | lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR6045002 | RR-TB | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR3675477 | Sensitive | lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR4796577 | HR-TB | None | SRR1049674 | HR-TB | lineage2.2.1 | None | ERR926157 | Sensitive | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR369163 | Sensitive | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR369158 | Other | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None |
|---|
