SRR6045526
|
Other
|
lineage4.9
|
None
|
ERR1873396
|
Pre-XDR-TB
|
M.canetti;lineage2.2
|
None
|
SRR3675486
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR4816551
|
HR-TB
|
lineage4.1.1.3
|
None
|
ERR736856
|
Sensitive
|
lineage4.9
|
None
|
SRR3675216
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR349265
|
Other
|
lineage4.9
|
None
|
SRR1169306
|
Other
|
La3;lineage4.9
|
None
|
ERR6865502
|
Sensitive
|
lineage4
|
None
|
SRR7240033
|
Other
|
La1.2;La1.8.1
|
None
|
SRR14801749
|
HR-TB
|
lineage4.9
|
None
|
ERR4817692
|
HR-TB
|
lineage1.1.2;lineage4
|
None
|
ERR9119525
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR363449
|
Sensitive
|
lineage4.9
|
None
|
ERR363474
|
Sensitive
|
lineage4.9
|
None
|
SAMEA2533358
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR124636
|
Sensitive
|
lineage4.9
|
None
|
ERR161039
|
HR-TB
|
La3;lineage4.3.4
|
None
|
ERR067699
|
Sensitive
|
La1;lineage2;lineage4.9
|
None
|
ERR9119138
|
RR-TB
|
M.canetti;lineage4.3.1;lineage4.9
|
None
|
ERR1873492
|
HR-TB
|
M.canetti;lineage2.2.2;lineage6.2
|
None
|
ERR294266
|
HR-TB
|
lineage4.2;lineage4.8.1;lineage4.9
|
None
|
ERR6865513
|
Other
|
lineage4.1.2.1
|
None
|
SRR5341461
|
HR-TB
|
lineage4.9
|
None
|
ERR349299
|
Other
|
lineage4.9
|
None
|
SRR9970981
|
RR-TB
|
lineage4.3.2.1
|
None
|
SRR6046245
|
Other
|
lineage4.9
|
None
|
SRR6046644
|
HR-TB
|
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3
|
None
|
SRR10808805
|
Other
|
La1;lineage4.9
|
None
|
SRR6458423
|
HR-TB
|
lineage2.2.1
|
None
|
SRR3675481
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR6511621
|
Sensitive
|
lineage4.9
|
None
|
ERR400336
|
Sensitive
|
lineage4.9
|
None
|
SRR6045371
|
Other
|
lineage4.9
|
None
|
ERR212121
|
HR-TB
|
lineage4.9;lineage6.3
|
None
|
ERR2229143
|
RR-TB
|
lineage4.9
|
None
|
ERR3283032
|
Other
|
lineage4.9
|
None
|
ERR4811311
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR363509
|
Sensitive
|
lineage4.9
|
None
|
SRR29096530
|
Sensitive
|
lineage4.9
|
None
|
SRR6046564
|
Sensitive
|
lineage4.9
|
None
|
SRR12708372
|
Sensitive
|
lineage4.9
|
None
|
ERR4819877
|
HR-TB
|
lineage4.9
|
None
|
SRR23961542
|
Other
|
La1;lineage4.9
|
None
|
ERR2446570
|
Sensitive
|
lineage4.8
|
nl
|
ERR4816466
|
HR-TB
|
lineage4.9
|
None
|
SRR3675387
|
Other
|
lineage4.9
|
None
|
SRR1172728
|
RR-TB
|
La3
|
None
|
ERR736859
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR369160
|
Sensitive
|
lineage4.9
|
None
|
ERR363445
|
Other
|
lineage4.9
|
None
|
ERR363502
|
Other
|
lineage4.9
|
None
|
SRR5341437
|
Sensitive
|
lineage4.9
|
None
|
ERR3445501
|
HR-TB
|
La1.7.1;La1.7.X-unk4;lineage7
|
None
|
SRR9970978
|
Sensitive
|
La1;lineage4.1.2
|
None
|
SRR3675456
|
RR-TB
|
lineage4.9;lineage7
|
None
|
ERR363447
|
Other
|
lineage4.9
|
None
|
SRR3675494
|
RR-TB
|
lineage4.9
|
None
|
SRR6045706
|
Sensitive
|
lineage4.9
|
None
|
SRR29050859
|
Other
|
lineage4.9
|
None
|
ERR736834
|
Sensitive
|
lineage4.9
|
None
|
SRR3675234
|
Other
|
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
ERR8976043
|
HR-TB
|
lineage2.1;lineage2.2;lineage6.3
|
None
|
ERR9786656
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR7821163
|
Other
|
lineage2.2.1
|
None
|
SRR9971112
|
Other
|
lineage2.2.1
|
None
|
ERR5311090
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR2010299
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4798262
|
HR-TB
|
La1.2.BCG
|
None
|
ERR3797014
|
Other
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
ERR4024991
|
Other
|
lineage4.8;lineage4.9
|
None
|
SRR11662690
|
HR-TB
|
lineage4.9
|
None
|
SRR5341469
|
HR-TB
|
lineage4.9
|
None
|
SRR6046026
|
RR-TB
|
lineage4.2;lineage4.9
|
None
|
SRR1180996
|
Sensitive
|
lineage4.9
|
None
|
ERR9119500
|
MDR-TB
|
lineage5.2
|
None
|
ERR363456
|
Sensitive
|
lineage4.9
|
None
|
ERR9786843
|
Other
|
|
None
|
ERR212033
|
Other
|
lineage4.9
|
None
|
ERR6359045
|
Other
|
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3
|
None
|
SRR28119752
|
Other
|
lineage4.9
|
None
|
SRR1162864
|
Other
|
lineage4.1.2.1
|
None
|
SRR6046295
|
HR-TB
|
lineage4.2;lineage4.9
|
None
|
ERR7911670
|
XDR-TB
|
M.canetti;lineage2.2
|
None
|
SRR19295647
|
Sensitive
|
lineage4.9
|
None
|
SRR29231479
|
RR-TB
|
lineage4.9
|
None
|
ERR3445502
|
Sensitive
|
lineage4.9;lineage7
|
None
|
SRR1175500
|
Sensitive
|
lineage4.1.1.3;lineage4.9
|
None
|
SRR6046397
|
Other
|
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
|
None
|
SRR3675243
|
Other
|
lineage4.9
|
None
|
SRR3675555
|
HR-TB
|
lineage2.1;lineage4.9;lineage7
|
None
|
ERR2693252
|
Sensitive
|
lineage4.9
|
None
|
ERR4818347
|
Other
|
lineage4.1.2
|
None
|
SRR1196566
|
Other
|
lineage4.9
|
None
|
ERR3797016
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4828872
|
Sensitive
|
lineage4.2;lineage4.9
|
None
|
SRR1172951
|
Other
|
lineage4.9
|
None
|
SRR1196768
|
MDR-TB
|
|
None
|
ERR4769444
|
HR-TB
|
lineage4.9
|
None
|
ERR1199132
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR1196583
|
Other
|
lineage4.9
|
None
|
ERR11252599
|
Other
|
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3
|
None
|
SRR5341319
|
Other
|
lineage3
|
None
|
ERR4816113
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR1165506
|
Other
|
lineage4.1.2.1
|
None
|
SRR3675571
|
HR-TB
|
M.canetti;lineage4.2;lineage4.9
|
None
|
ERR4817998
|
Other
|
lineage3
|
None
|
ERR11252736
|
Other
|
lineage4.9
|
None
|
ERR867542
|
HR-TB
|
lineage4.2.1.1;lineage4.3.3
|
None
|
ERR387051
|
Other
|
lineage4.9
|
None
|
ERR2693242
|
RR-TB
|
lineage2.1;lineage4.9
|
None
|
ERR176568
|
HR-TB
|
La3;lineage2.1;lineage4.9
|
None
|
SRR1173788
|
Sensitive
|
lineage4.9
|
None
|
SRR3742657
|
Pre-XDR-TB
|
La3;M.canetti;lineage2.2.1
|
None
|
ERR369158
|
Other
|
lineage4.9
|
None
|
ERR294248
|
MDR-TB
|
lineage2.1;lineage4.9
|
None
|
ERR5311083
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4831620
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR3675265
|
Other
|
lineage4
|
None
|
ERR502943
|
Sensitive
|
lineage2.2.1;lineage4
|
None
|
SRR18003019
|
Other
|
lineage2.2.1
|
None
|
SRR12708384
|
Sensitive
|
lineage4.9
|
None
|
SRR1173355
|
Other
|
lineage4.9
|
None
|
ERR9786592
|
Other
|
lineage4.3.4.2
|
None
|
ERR3797017
|
HR-TB
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
ERR5311100
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR6358979
|
Other
|
lineage4.9
|
None
|
ERR4820773
|
HR-TB
|
lineage4.9
|
None
|
ERR323108
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR4821686
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR5341310
|
Other
|
lineage1.1.2
|
None
|
ERR6866410
|
Sensitive
|
lineage4.9
|
None
|
SRR3675231
|
MDR-TB
|
lineage4.9;lineage7
|
None
|
ERR987765
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR1162740
|
Other
|
lineage4.1.2.1
|
None
|
ERR323107
|
Sensitive
|
lineage4.9
|
None
|
ERR4799547
|
HR-TB
|
lineage2.2.1
|
None
|
SRR5341300
|
HR-TB
|
lineage4.9
|
None
|
ERR349300
|
Sensitive
|
lineage4.9
|
None
|
ERR363479
|
Sensitive
|
lineage4.9
|
None
|
SRR3675473
|
Sensitive
|
lineage4.9
|
None
|
ERR4798099
|
Other
|
lineage4.9
|
None
|
ERR4831616
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR1035138
|
MDR-TB
|
lineage2.1;lineage4.9
|
None
|
SRR1184312
|
Other
|
lineage2.2.1
|
None
|
ERR4811105
|
HR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR502510
|
Sensitive
|
lineage4.9
|
None
|
SRR16156817
|
Other
|
lineage4.9
|
None
|
SRR28119811
|
Other
|
lineage2.2.1;lineage6.3
|
None
|
ERR5311078
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4818252
|
Sensitive
|
lineage4.1.1.2
|
None
|
ERR4872119
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR3283016
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR1063846
|
HR-TB
|
lineage4.9
|
None
|
ERR400326
|
Other
|
lineage4.9
|
None
|
SRR6325447
|
MDR-TB
|
lineage2.1;lineage4.1.1.1;lineage6.3
|
None
|
SRR1184380
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR1791696
|
Other
|
La1.8.1
|
None
|
SRR5341323
|
Sensitive
|
lineage4.9
|
None
|
ERR3273109
|
HR-TB
|
lineage4
|
None
|
SRR3675561
|
Other
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR278594
|
HR-TB
|
lineage2.1;lineage4.9
|
None
|
ERR1023295
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.2.1
|
None
|
ERR5311089
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR363499
|
Sensitive
|
lineage4.9
|
None
|
ERR990545
|
Other
|
lineage3
|
None
|
ERR108471
|
HR-TB
|
lineage4.9
|
None
|
ERR4797201
|
Other
|
lineage1.2.2.2
|
None
|
SRR14802079
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR245794
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
ERR4816478
|
HR-TB
|
lineage4
|
None
|
SRR3675541
|
Sensitive
|
lineage4.9
|
None
|
ERR9786711
|
Sensitive
|
lineage4.6.2.2
|
None
|
SRR3675518
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR12416842
|
HR-TB
|
lineage4.9
|
None
|
ERR6866639
|
Other
|
lineage4.9
|
None
|
ERR4872094
|
MDR-TB
|
lineage5.2
|
None
|
SRR3675229
|
Sensitive
|
lineage4.9
|
None
|
ERR133825
|
HR-TB
|
La1;lineage4.9
|
None
|
ERR5311099
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4816656
|
Other
|
lineage4.9
|
None
|
ERR9119499
|
MDR-TB
|
lineage5.2
|
None
|
SRR3675246
|
Other
|
lineage4.9
|
None
|
SRR1180172
|
Other
|
lineage2.2.1
|
None
|
SRR6045050
|
Sensitive
|
lineage4.3.2.1
|
None
|
ERR4797193
|
HR-TB
|
lineage1.1.2
|
None
|
ERR176751
|
Other
|
lineage4.9
|
None
|
ERR702404
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR6044819
|
Sensitive
|
lineage4.9
|
None
|
ERR5311096
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1165423
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR5311102
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR373947
|
Other
|
lineage4.9
|
None
|
ERR3283017
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9
|
None
|
ERR779852
|
Sensitive
|
lineage4.9
|
None
|
ERR4872093
|
MDR-TB
|
lineage5.2
|
None
|
ERR373946
|
Sensitive
|
lineage4.9
|
None
|
SRR23961559
|
Other
|
La1.7;lineage4.2
|
None
|
SRR6046225
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR6045892
|
Sensitive
|
lineage4.9
|
None
|
SRR1183144
|
Other
|
lineage2.2.1
|
None
|
ERR3283057
|
Sensitive
|
La3;lineage4.9
|
None
|
SRR3675320
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9
|
None
|
ERR3283018
|
HR-TB
|
lineage4.9
|
None
|
ERR3077978
|
RR-TB
|
lineage1.1
|
None
|
SRR23961549
|
Other
|
La1.2
|
None
|
ERR1873393
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR5341299
|
HR-TB
|
lineage4.9
|
None
|
ERR502912
|
Other
|
lineage2.2.1
|
None
|
SRR6045233
|
Other
|
M.canetti;lineage4.9
|
None
|
ERR2513283
|
Sensitive
|
lineage5.1.4
|
None
|
SRR1165584
|
Other
|
lineage4.1.2.1
|
None
|
SRR20970016
|
Other
|
lineage2.2
|
None
|
SRR5341412
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR11252612
|
Other
|
La3;lineage4.9
|
None
|
SRR3675554
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR5341387
|
Other
|
lineage4.9
|
None
|
SRR1172857
|
Other
|
|
None
|
SRR6325442
|
HR-TB
|
lineage2.1;lineage4.1.1.1;lineage6.3
|
None
|
SRR28119805
|
Other
|
lineage4.9
|
None
|
ERR234659
|
Other
|
|
None
|
SRR8552928
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR473314
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR29093105
|
Other
|
lineage2.2.2;lineage4
|
None
|
ERR502908
|
HR-TB
|
lineage2.2.1
|
None
|
SRR12142341
|
HR-TB
|
lineage2.1
|
None
|
ERR349330
|
Sensitive
|
lineage4.9
|
None
|
ERR363446
|
Sensitive
|
lineage4.9
|
None
|
ERR3801503
|
Sensitive
|
lineage4.6.2.2
|
None
|
SRR3675539
|
HR-TB
|
lineage4.9;lineage7
|
None
|
ERR4797474
|
Sensitive
|
lineage4.9
|
None
|
ERR9786525
|
Other
|
lineage4.1;lineage4.8
|
None
|
SRR1184372
|
MDR-TB
|
|
None
|
SRR12006550
|
Sensitive
|
lineage1.2.1.2
|
None
|
SRR7240492
|
HR-TB
|
La1.7.1
|
None
|
SRR1173453
|
Other
|
lineage4.4.1.1
|
None
|
SRR1175507
|
Sensitive
|
lineage4.1.1.3;lineage4.9
|
None
|
SRR6046382
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6045503
|
Sensitive
|
lineage4.9
|
None
|
ERR13265528
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR5311098
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4797350
|
Sensitive
|
lineage1;lineage4.9
|
None
|
SRR7236177
|
Other
|
La1.8.1
|
None
|
SRR6045952
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR323062
|
Sensitive
|
lineage4.9
|
None
|
ERR3797023
|
HR-TB
|
La1.8.1
|
None
|
ERR4819241
|
Other
|
lineage4.9
|
None
|
SRR1173778
|
Other
|
lineage4.9
|
None
|
ERR176658
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR137286
|
Other
|
lineage4.9
|
None
|
ERR4188342
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR10808668
|
Sensitive
|
lineage2.2.1
|
None
|
SRR3675508
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR3468607
|
Other
|
lineage4.9
|
None
|
ERR2693229
|
RR-TB
|
La3;M.canetti;lineage4.9
|
None
|
ERR4810741
|
HR-TB
|
La3;lineage2.1;lineage6.3
|
None
|
ERR1035239
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR363453
|
Sensitive
|
lineage4.9
|
None
|
SRR9971114
|
Other
|
lineage2.2.1
|
None
|
ERR2693257
|
Other
|
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9
|
None
|
SRR6044875
|
Sensitive
|
lineage4.9
|
None
|
SRR29096882
|
Sensitive
|
lineage4.9
|
None
|
ERR3797044
|
Other
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9
|
None
|
SRR1175496
|
Sensitive
|
lineage4.9
|
None
|
ERR2693239
|
RR-TB
|
M.canetti;lineage2.1;lineage4
|
None
|
SRR1710057
|
Other
|
lineage2.1
|
None
|
ERR363498
|
Sensitive
|
lineage4.9
|
None
|
ERR4811075
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4831546
|
HR-TB
|
M.canetti;lineage2.2.2;lineage6.2
|
None
|
SRR1184388
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR3675506
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR550636
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR4817896
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1183049
|
RR-TB
|
lineage2.2
|
None
|
ERR5311081
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4811022
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR3416776
|
Other
|
lineage2.1
|
None
|
SRR9970980
|
HR-TB
|
lineage4.1.2
|
None
|
ERR4811142
|
RR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR3797028
|
HR-TB
|
M.canetti;lineage4.9
|
None
|
SRR1163221
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR5341341
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2693231
|
Other
|
La1.6;La3;lineage4.6.4;lineage4.9
|
None
|
SRR1167055
|
Other
|
lineage4.1.2.1
|
None
|
SRR1166821
|
Other
|
lineage4.1.2.1
|
None
|
ERR736863
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR363490
|
Sensitive
|
lineage4.9
|
None
|
ERR4831617
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1165628
|
Other
|
La3;lineage4.9
|
None
|
SRR12708418
|
HR-TB
|
lineage2.2.1
|
None
|
SRR3675574
|
Other
|
lineage4.6.3;lineage4.9;lineage6.3
|
None
|
ERR323115
|
Sensitive
|
lineage4.9
|
None
|
ERR9787256
|
Other
|
lineage6.1.3
|
None
|
ERR736839
|
HR-TB
|
M.canetti;lineage4.9
|
None
|
SRR18910194
|
HR-TB
|
lineage2.2.2
|
None
|
SRR10809074
|
Sensitive
|
lineage4.9
|
None
|
SRR5341384
|
HR-TB
|
lineage4.9
|
None
|
ERR2693254
|
Other
|
La1.6;La3;lineage4.9
|
None
|
ERR9786526
|
Other
|
lineage4.1;lineage4.8
|
None
|
ERR373945
|
Sensitive
|
lineage4.9
|
None
|
SRR12708374
|
Sensitive
|
lineage4.1;lineage4.9
|
None
|
SRR12708398
|
Sensitive
|
lineage4.4.1.1
|
None
|
SRR3675235
|
Sensitive
|
lineage4.9
|
None
|
ERR1063883
|
HR-TB
|
lineage4.9
|
None
|
ERR363426
|
Sensitive
|
lineage4.9
|
None
|
ERR400345
|
Other
|
lineage4.9
|
None
|
ERR3468544
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR6046897
|
Sensitive
|
lineage4.9
|
None
|
SRR11662694
|
Other
|
lineage4.9
|
None
|
ERR4178226
|
Sensitive
|
lineage4
|
None
|
ERR4797184
|
Sensitive
|
lineage4.9
|
None
|
SRR1175508
|
Sensitive
|
lineage4.9
|
None
|
ERR5917710
|
Other
|
lineage4.1.2.1
|
None
|
ERR161037
|
Other
|
lineage4.9
|
None
|
SRR10315567
|
HR-TB
|
lineage2.2.1
|
None
|
SRR3675248
|
Other
|
lineage4.9
|
None
|
SRR1196546
|
Other
|
lineage4.9
|
None
|
ERR3283020
|
HR-TB
|
La1.6;La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR6045327
|
Other
|
lineage2.1;lineage4.3.2;lineage4.9
|
None
|
SRR6789624
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR6044942
|
HR-TB
|
lineage4.9
|
None
|
SRR20970043
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR751326
|
Other
|
lineage4.9
|
None
|
ERR2693230
|
HR-TB
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
SRR6045948
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4817731
|
HR-TB
|
lineage4.9
|
None
|
SRR6325444
|
MDR-TB
|
M.canetti;lineage2.1;lineage6.3
|
None
|
SRR5341453
|
Other
|
lineage4.9
|
None
|
ERR4188350
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR1035122
|
Sensitive
|
lineage4.9
|
None
|
SRR1173767
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1181091
|
Other
|
lineage2.2.1.1
|
None
|
ERR4812155
|
Other
|
lineage4.9
|
None
|
ERR176643
|
Other
|
La3;lineage4.9
|
None
|
ERR8479578
|
Sensitive
|
lineage1.1.3.1
|
None
|
ERR176766
|
HR-TB
|
lineage2.1;lineage4.9
|
None
|
SRR1172817
|
Other
|
La3
|
None
|
SRR1173400
|
Other
|
lineage4.9
|
None
|
SRR5341308
|
Sensitive
|
lineage4.9
|
None
|
SRR12416840
|
MDR-TB
|
lineage4.9
|
None
|
SAMN02414850
|
Other
|
lineage4.1.2.1
|
None
|
SRR3675517
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR6358991
|
HR-TB
|
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3
|
None
|
SRR6045785
|
MDR-TB
|
lineage4.2;lineage4.8.1;lineage4.9
|
None
|
ERR349266
|
Sensitive
|
lineage4.9
|
None
|
ERR369157
|
Sensitive
|
lineage4.9
|
None
|
SRR1184294
|
Other
|
lineage4.9
|
None
|
SRR6079962
|
HR-TB
|
lineage2.2.1.1
|
None
|
SRR12708416
|
Sensitive
|
|
None
|
SRR3675585
|
Sensitive
|
lineage4.9
|
None
|
ERR4796929
|
Sensitive
|
lineage4.9
|
None
|
ERR4831638
|
Sensitive
|
lineage1.1.1;lineage4
|
None
|
ERR4816151
|
Sensitive
|
lineage4.8
|
None
|
ERR386953
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4797264
|
Sensitive
|
lineage4.9
|
None
|
ERR176560
|
HR-TB
|
La1.7;lineage4.9
|
None
|
SRR1184381
|
MDR-TB
|
|
None
|
SRR6325448
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR2514692
|
Other
|
|
None
|
SRR28351339
|
MDR-TB
|
lineage4
|
None
|
ERR212001
|
HR-TB
|
|
None
|
SRR6789621
|
Other
|
lineage4.9
|
None
|
ERR2509673
|
Other
|
lineage2.2.1
|
None
|
ERR4797313
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6044815
|
Other
|
lineage4.9
|
None
|
SRR28119756
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR212034
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR4819422
|
HR-TB
|
lineage4.9
|
None
|
ERR6866022
|
Other
|
lineage4.8;lineage4.9
|
None
|
SRR1173633
|
Other
|
lineage4.9
|
None
|
SRR7496523
|
Other
|
lineage4.7
|
None
|
SRR1167384
|
Other
|
La3;lineage4.9
|
None
|
SRR1640750
|
Other
|
|
None
|
SRR3675444
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4831545
|
XDR-TB
|
M.canetti;lineage2.2
|
None
|
ERR3275201
|
Sensitive
|
lineage4.8
|
nl
|
ERR4796254
|
Sensitive
|
lineage4.9
|
None
|
ERR4819809
|
HR-TB
|
lineage4.6.2.2
|
None
|
ERR6326069
|
Pre-XDR-TB
|
lineage4.3.4.1
|
None
|
ERR363500
|
Sensitive
|
lineage4.9
|
None
|
ERR2512770
|
Sensitive
|
lineage4.2.1
|
None
|
ERR3283042
|
Other
|
lineage4.9
|
None
|
ERR1034652
|
Other
|
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
|
None
|
SRR1180137
|
Other
|
lineage2.2.1
|
None
|
SRR19304036
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR3675322
|
HR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9
|
None
|
ERR181744
|
HR-TB
|
La3;lineage4.9
|
None
|
ERR323066
|
Sensitive
|
lineage4.9
|
None
|
ERR369162
|
Other
|
lineage4.9
|
None
|
SRR29016780
|
Other
|
lineage4.9
|
None
|
ERR4811030
|
Sensitive
|
lineage4.9
|
None
|
ERR736872
|
HR-TB
|
lineage4.9
|
None
|
ERR4798431
|
Sensitive
|
lineage4.1;lineage4.9
|
None
|
ERR4811031
|
Sensitive
|
lineage4.5
|
None
|
SRR28351347
|
Other
|
lineage3
|
None
|
ERR3283024
|
Other
|
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9
|
None
|
SRR3742665
|
HR-TB
|
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
SRR28119717
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR20969677
|
HR-TB
|
La3;lineage2
|
None
|
ERR161034
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
ERR369163
|
Sensitive
|
lineage4.9
|
None
|
ERR1063896
|
Sensitive
|
|
None
|
ERR736871
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR3675580
|
Sensitive
|
lineage4.9
|
None
|
ERR502511
|
Sensitive
|
lineage4.9
|
None
|
ERR400320
|
Sensitive
|
lineage4.9
|
None
|
SRR1173629
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR1159378
|
Other
|
lineage4.9
|
None
|
ERR8665994
|
Other
|
lineage4.9
|
None
|
ERR2693245
|
HR-TB
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
SRR3675522
|
Other
|
lineage4.9
|
None
|
SRR5341296
|
Sensitive
|
lineage4.9
|
None
|
SRR1791747
|
Other
|
La1.8.1
|
None
|
SRR6046577
|
Other
|
lineage4.6.3;lineage4.9
|
None
|
ERR5311101
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR10315466
|
RR-TB
|
lineage2.2.1
|
None
|
ERR4178309
|
Other
|
lineage4.1.2.1
|
None
|
ERR702405
|
Sensitive
|
lineage4.9
|
None
|
ERR363506
|
Sensitive
|
lineage4.9
|
None
|
SRR3675455
|
Sensitive
|
lineage4.9
|
None
|
SRR6325445
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR363421
|
Sensitive
|
lineage4.9
|
None
|
SRR5341345
|
Sensitive
|
lineage4.9
|
None
|