Rv0006 - c.162G>C


Drug resistance types
94 Sensitive 1 RR-TB 55 HR-TB 10 MDR-TB 2 Pre-XDR-TB 1 XDR-TB 80 Other
lineage Counts
lineage Count
La1.6;La3;lineage4.9 2
lineage4.9 151
La1.2;La1.8.1 1
lineage4.1.1.2 1
lineage4 5
lineage2.1;lineage4.1.4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1.7.1;lineage4.9 1
La1.7.1;La1.7.X-unk4;lineage7 1
La1;lineage4.1.2 1
lineage6.1.3 2
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage1.1.1;lineage4 1
La1.2.BCG 1
lineage4.8;lineage4.9 2
lineage3 3
La1.8.1 2
lineage3.1;lineage9 1
lineage4.1;lineage4.9 1
lineage4.5 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage2.2.1 11
lineage4.1.2 1
lineage1.2.1.1 1
lineage1;lineage4.9 1
La1.7;lineage3.1;lineage4 1
La1.7.1;La1.7.X-unk4 1
lineage4.3.2.1 2
lineage1.1.3.1 1
M.canetti;lineage4.9 1
lineage1.1.2 2
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.7;lineage3;lineage4.9;lineage7 1
La1.7;lineage4.9 2
La1.6 1
lineage3.1.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage2.2.1.1 1
lineage4.9;lineage7 2
La1.7;M.canetti;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.6.2.2 1
lineage4.9;lineage6.1.3 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage4.1.1.1 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage4.3.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
1
La1.7;lineage4.9;lineage7 3
lineage4.1.2.1 2
La1.6;La3;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.1.1.3 1
La1;lineage4.9 1
lineage4.2.1 1
lineage1.1.1 1
La1.7;lineage4.9;lineage6 1
lineage4.3.4 1
lineage4.3.1;lineage4.9;lineage6 1
lineage4.6.3;lineage4.9 1
spoligotype Counts
spoligotype Count
None 243
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
SRR14801749 HR-TB lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
SRR29096276 Sensitive lineage4.9 None
ERR4818252 Sensitive lineage4.1.1.2 None
ERR4178226 Sensitive lineage4 None
ERR4769450 Other lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR751326 Other lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR363499 Sensitive lineage4.9 None
ERR13285191 Sensitive lineage4.9 None
ERR971389 Sensitive lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR363502 Other lineage4.9 None
SRR3675441 Other lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
SRR3675246 Other lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR5341308 Sensitive lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR9787153 Other lineage6.1.3 None
ERR373947 Other lineage4.9 None
ERR736834 Sensitive lineage4.9 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR4798262 HR-TB La1.2.BCG None
ERR349296 Sensitive lineage4.9 None
ERR4024991 Other lineage4.8;lineage4.9 None
SRR1180996 Sensitive lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR349264 Sensitive lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR363446 Sensitive lineage4.9 None
ERR926156 Sensitive lineage4.9 None
SRR6046878 Other lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
ERR363500 Sensitive lineage4.9 None
SRR7236177 Other La1.8.1 None
ERR3283042 Other lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
SRR26399239 Sensitive lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR369162 Other lineage4.9 None
ERR363453 Sensitive lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR369151 Other lineage4.9 None
ERR363498 Sensitive lineage4.9 None
ERR4831620 MDR-TB lineage2.2.1 None
SRR3675265 Other lineage4 None
SRR6046210 Other lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR1791747 Other La1.8.1 None
ERR702405 Sensitive lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR323107 Sensitive lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR4798099 Other lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4814734 Other lineage1.2.1.1 None
ERR926160 Sensitive lineage4.9 None
ERR9787256 Other lineage6.1.3 None
ERR3283030 HR-TB lineage4.9 None
ERR349265 Other lineage4.9 None
ERR373945 Sensitive lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR400345 Other lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR363449 Sensitive lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR10315567 HR-TB lineage2.2.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR400326 Other lineage4.9 None
SRR6511621 Sensitive lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR3283032 Other lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR6045050 Sensitive lineage4.3.2.1 None
ERR4797193 HR-TB lineage1.1.2 None
ERR4769452 Other lineage4.9 None
SRR5341467 Other lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR779852 Sensitive lineage4.9 None
ERR373946 Sensitive lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR9971112 Other lineage2.2.1 None
SRR26399265 Other lineage2.2.1 None
SRR29096174 Sensitive La1.7;lineage4.9 None
ERR11268038 Other La1.6 None
SRR6046485 Other lineage4.9 None
ERR2513121 Sensitive lineage3.1.3 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4800527 MDR-TB lineage2.2.1 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR363456 Sensitive lineage4.9 None
ERR13265833 Other lineage4.9 None
SRR5341387 Other lineage4.9 None
ERR369159 Sensitive lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
SRR29096717 Sensitive lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR4819422 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR13285192 Sensitive lineage4.9 None
SRR6045503 Sensitive lineage4.9 None
ERR4819809 HR-TB lineage4.6.2.2 None
ERR1063858 HR-TB lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR926157 Sensitive lineage4.9 None
ERR176651 Other lineage4.9 None
ERR137286 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR4811030 Sensitive lineage4.9 None
ERR4816113 Sensitive lineage4.1.1.1 None
SRR6046611 Sensitive lineage4.9 None
SRR5341373 Other lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR736872 HR-TB lineage4.9 None
SRR3675270 Other lineage4.9 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR29096795 Sensitive lineage4.9 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR1063896 Sensitive None
SRR1159378 Other lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR5341400 Sensitive lineage4.9 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR6046046 Other lineage4.9 None
ERR6866410 Sensitive lineage4.9 None
ERR4178309 Other lineage4.1.2.1 None
SRR5341310 Other lineage1.1.2 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR363506 Sensitive lineage4.9 None
ERR363490 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
ERR4799547 HR-TB lineage2.2.1 None
SRR5341293 Sensitive lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
ERR502510 Sensitive lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR6865502 Sensitive lineage4 None
SRR6046897 Sensitive lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
SRR3675209 Sensitive lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR349299 Other lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
SRR10808805 Other La1;lineage4.9 None
ERR926163 Other lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR4816466 HR-TB lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
ERR363447 Other lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
ERR349266 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
SRR5341298 Sensitive lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR5341299 HR-TB lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
ERR181824 HR-TB lineage4.9 None
ERR176778 HR-TB lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
ERR4796254 Sensitive lineage4.9 None
ERR323062 Sensitive lineage4.9 None
SRR1158918 Sensitive lineage4.9 None
ERR323066 Sensitive lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR4817998 Other lineage3 None
SRR28351347 Other lineage3 None
ERR736817 HR-TB lineage4.3.4 None
ERR369163 Sensitive lineage4.9 None
ERR502511 Sensitive lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
ERR6358979 Other lineage4.9 None
SRR5341455 Sensitive lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR6045053 Other lineage4 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR13285068 Sensitive lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR363421 Sensitive lineage4.9 None
ERR369161 Sensitive lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR736856 Sensitive lineage4.9 None
ERR181887 Other lineage4.9 None
SRR5341384 HR-TB lineage4.9 None