Rv1173 - c.1239T>C
Drug resistance types
21 Sensitive
2 RR-TB
102 HR-TB
8 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
62 Other
lineage Counts
| lineage | Count |
|---|---|
| 121 | |
| lineage4 | 24 |
| lineage4.9 | 9 |
| lineage2.2.1 | 10 |
| lineage2.2 | 3 |
| lineage4.3.3 | 1 |
| lineage3.1 | 2 |
| lineage4.3.4.1 | 1 |
| lineage2 | 3 |
| lineage2.1 | 2 |
| lineage4.5 | 1 |
| lineage4.9;La3 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.8;La3 | 1 |
| La1.8.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4.7 | 1 |
| lineage3 | 2 |
| lineage4.1.3;lineage1.1.2 | 1 |
| La2 | 1 |
| lineage4.3.4 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage1.1.2 | 1 |
| lineage6.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 198 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1169194 | Other | None | SRR1172310 | HR-TB | None | SRR1172234 | Other | None | SRR1172817 | HR-TB | None | SRR1172728 | MDR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1172857 | MDR-TB | None | SRR1173363 | HR-TB | None | SRR1172951 | Other | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173400 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173629 | Other | None | SRR1173788 | Other | None | SRR1173778 | Other | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1174897 | HR-TB | None | SRR1175049 | RR-TB | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1184294 | HR-TB | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184381 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1184372 | MDR-TB | None | SRR1184388 | Other | None | SRR1196494 | MDR-TB | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196768 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR1196566 | HR-TB | None | SRR12142341 | HR-TB | None | SRR12416824 | HR-TB | None | SRR1710057 | Other | lineage2.1 | None | SRR15368973 | Other | None | SRR18003019 | Other | lineage2.2.1 | None | SRR19304036 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19303884 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR3675465 | HR-TB | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR4815604 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR176793 | Other | lineage4.1.1 | None | SRR6325445 | HR-TB | None | ERR161033 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR176751 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3416776 | Other | lineage2.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675236 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | ERR176643 | HR-TB | None | SRR3675488 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675222 | Other | None | SRR3675501 | HR-TB | None | SRR3675234 | Other | None | ERR176740 | HR-TB | None | SRR3675510 | Other | None | ERR212034 | HR-TB | None | ERR2027263 | Other | lineage4 | None | SRR3675545 | HR-TB | None | ERR212033 | HR-TB | None | SRR3675571 | HR-TB | None | ERR4817060 | RR-TB | None | SRR3675572 | Other | None | SRR3675558 | HR-TB | None | ERR212121 | HR-TB | None | ERR4816466 | HR-TB | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR4816585 | Other | lineage2.2 | None | SRR3742665 | HR-TB | None | ERR4816656 | HR-TB | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR502912 | Other | lineage2.2.1 | None | ERR4818021 | Other | La1.8.1 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR4818347 | Other | lineage4.1.2 | None | ERR234659 | HR-TB | None | ERR4818615 | Other | None | ERR4818929 | HR-TB | None | ERR4818394 | Other | lineage4.9 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR2693231 | Other | None | SRR5341302 | HR-TB | None | ERR4819932 | Other | lineage4.7 | None | SRR5341332 | Pre-XDR-TB | lineage3 | None | SRR5341333 | HR-TB | None | ERR4819781 | Other | lineage2.2.1 | None | ERR2693230 | Other | None | ERR2693239 | HR-TB | None | ERR2693257 | Other | None | ERR2693254 | Other | None | ERR2693227 | Other | lineage4.9 | None | ERR4822101 | Sensitive | lineage4.1.3;lineage1.1.2 | None | SRR6045519 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6044890 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046540 | HR-TB | None | ERR502908 | HR-TB | lineage2.2.1 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6789626 | Other | None | ERR502524 | HR-TB | La2 | None | SRR6046644 | HR-TB | None | SRR6325447 | HR-TB | None | ERR294266 | HR-TB | None | ERR502532 | HR-TB | None | SRR7496517 | Other | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR7535086 | Other | None | ERR3283017 | HR-TB | None | ERR323039 | HR-TB | None | ERR323043 | HR-TB | None | ERR323063 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None | ERR3283027 | HR-TB | None | ERR3283024 | Other | None | ERR363446 | Sensitive | lineage4 | None | ERR3283032 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3445503 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR3283036 | HR-TB | None | ERR349298 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR3797017 | Other | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797014 | Other | None | ERR369163 | Sensitive | lineage4 | None | ERR3797044 | Other | None | ERR3797043 | HR-TB | None | ERR3797036 | HR-TB | None | ERR4810741 | HR-TB | None | ERR3797061 | Other | None | ERR3797083 | HR-TB | None | ERR3797069 | Other | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4800341 | Other | lineage3 | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR702406 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4811493 | HR-TB | None | ERR6358991 | HR-TB | None | ERR6359045 | HR-TB | None | ERR5336148 | Other | None | ERR6358837 | HR-TB | None | ERR702404 | HR-TB | None | ERR736839 | Other | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736865 | HR-TB | None | ERR736867 | HR-TB | None | ERR736874 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9786604 | Other | None | ERR9786671 | Other | None | ERR9786843 | Other | None | ERR9117709 | HR-TB | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9787153 | Other | lineage6.1.3 | None |
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